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The map label for this gene is deoD

Identifier: 108761834

GI number: 108761834

Start: 2680183

End: 2680902

Strand: Direct

Name: deoD

Synonym: MXAN_2306

Alternate gene names: 108761834

Gene position: 2680183-2680902 (Clockwise)

Preceding gene: 108760150

Following gene: 108759898

Centisome position: 29.32

GC content: 68.75

Gene sequence:

>720_bases
ATGGCGACTCCTCATATCTCCGCTGCCCCTGGTGACTTCGCTGACGTGGTCCTCATGCCTGGCGACCCGCTCCGCGCTCG
TTACATCTCCGACCGCTTCCTGGAAGGTGCCCGCGAGGTCACCTCCGTGCGCAACATGCTCGGCTTCACCGGGACCTTCC
GGGGCCGGCGCGTGTCGGTGATGGGGCACGGCATGGGCGTTCCCTCCATCTCCATCTACGCCACCGAGCTCATCAAGACG
TATGGGGTGCGCGTGATCATCCGCGTGGGCAGCTGCGGCGCGCTGAGCACCGACGTGAAGGTCCGGGAGGTCATCGTCGC
GACGGGGGCCGGCACGGACTCCAACGTGAATCGGATGCGGCTGATGGGGCATGACTTCGCCGCGGTGGCGGACTTCACGC
TCGCGCGCCGGGCCATGGAGGCGGCGGAGCGGCGCAACAAGCCTGTGCGCGCCGGCCCCGTCTTCACCTCCGACCTCTTC
TACCACCCGCAGGAGCAGCTCAACGCCACCCTGGCGCGGATGGGTGTCCTGGCCGTCGAGATGGAGGTCGCCGGCCTCTA
CGGCGTGGCCGCGGAGTCGGGCGCCCGCGCGCTGGGGCTGCTCACGGTGTCGGACCACATCATCACCGGGGAGAGTCTCA
CGCCGCAGGAGCGGCAGACGACGTTCGACGAGATGATTGAACTCGCCCTGGACGTCGCACACGCCGAACCCACGCCGTAG

Upstream 100 bases:

>100_bases
CTTCCACGTGGCCTGGGTGGCCGGGCCCTGAGCTCGGGCGACGCGCGGCGGTTGATTGGTGAGGGCACTCCCGGGCGGAC
ACGCGGTATATGGTGCGCCC

Downstream 100 bases:

>100_bases
CGCCTTGTTGGTGGGCAGGCGGGCAGGGGGCCTGTCCGCTCTGAAGGTACGAGAGGGCCGCTCTCGGAGCGCTTTCCAGC
GCCGGGGGCGGCCAGATTTC

Product: purine nucleoside phosphorylase

Products: NA

Alternate protein names: PNP

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MATPHISAAPGDFADVVLMPGDPLRARYISDRFLEGAREVTSVRNMLGFTGTFRGRRVSVMGHGMGVPSISIYATELIKT
YGVRVIIRVGSCGALSTDVKVREVIVATGAGTDSNVNRMRLMGHDFAAVADFTLARRAMEAAERRNKPVRAGPVFTSDLF
YHPQEQLNATLARMGVLAVEMEVAGLYGVAAESGARALGLLTVSDHIITGESLTPQERQTTFDEMIELALDVAHAEPTP

Sequences:

>Translated_239_residues
MATPHISAAPGDFADVVLMPGDPLRARYISDRFLEGAREVTSVRNMLGFTGTFRGRRVSVMGHGMGVPSISIYATELIKT
YGVRVIIRVGSCGALSTDVKVREVIVATGAGTDSNVNRMRLMGHDFAAVADFTLARRAMEAAERRNKPVRAGPVFTSDLF
YHPQEQLNATLARMGVLAVEMEVAGLYGVAAESGARALGLLTVSDHIITGESLTPQERQTTFDEMIELALDVAHAEPTP
>Mature_238_residues
ATPHISAAPGDFADVVLMPGDPLRARYISDRFLEGAREVTSVRNMLGFTGTFRGRRVSVMGHGMGVPSISIYATELIKTY
GVRVIIRVGSCGALSTDVKVREVIVATGAGTDSNVNRMRLMGHDFAAVADFTLARRAMEAAERRNKPVRAGPVFTSDLFY
HPQEQLNATLARMGVLAVEMEVAGLYGVAAESGARALGLLTVSDHIITGESLTPQERQTTFDEMIELALDVAHAEPTP

Specific function: Cleavage Of Guanosine Or Inosine To Respective Bases And Sugar-1-Phosphate Molecules. [C]

COG id: COG0813

COG function: function code F; Purine-nucleoside phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP/UDP phosphorylase family

Homologues:

Organism=Escherichia coli, GI1790844, Length=231, Percent_Identity=60.6060606060606, Blast_Score=296, Evalue=9e-82,
Organism=Escherichia coli, GI1790265, Length=209, Percent_Identity=29.6650717703349, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DEOD_MYXXD (Q1D9Z7)

Other databases:

- EMBL:   CP000113
- RefSeq:   YP_630526.1
- ProteinModelPortal:   Q1D9Z7
- SMR:   Q1D9Z7
- STRING:   Q1D9Z7
- GeneID:   4105578
- GenomeReviews:   CP000113_GR
- KEGG:   mxa:MXAN_2306
- TIGR:   MXAN_2306
- eggNOG:   COG0813
- HOGENOM:   HBG617197
- OMA:   SFETHAF
- PhylomeDB:   Q1D9Z7
- BioCyc:   MXAN246197:MXAN_2306-MONOMER
- HAMAP:   MF_01627
- InterPro:   IPR004402
- InterPro:   IPR018017
- InterPro:   IPR018016
- InterPro:   IPR000845
- PANTHER:   PTHR21234
- TIGRFAMs:   TIGR00107

Pfam domain/function: PF01048 PNP_UDP_1

EC number: =2.4.2.1

Molecular weight: Translated: 25704; Mature: 25573

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01232 PNP_UDP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPHISAAPGDFADVVLMPGDPLRARYISDRFLEGAREVTSVRNMLGFTGTFRGRRVSV
CCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
MGHGMGVPSISIYATELIKTYGVRVIIRVGSCGALSTDVKVREVIVATGAGTDSNVNRMR
EECCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCEEE
LMGHDFAAVADFTLARRAMEAAERRNKPVRAGPVFTSDLFYHPQEQLNATLARMGVLAVE
EECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHCCCHHHHHHHHHHHHHHEEE
MEVAGLYGVAAESGARALGLLTVSDHIITGESLTPQERQTTFDEMIELALDVAHAEPTP
EEHHHHEEEHHCCCCCEEEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ATPHISAAPGDFADVVLMPGDPLRARYISDRFLEGAREVTSVRNMLGFTGTFRGRRVSV
CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
MGHGMGVPSISIYATELIKTYGVRVIIRVGSCGALSTDVKVREVIVATGAGTDSNVNRMR
EECCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCEEE
LMGHDFAAVADFTLARRAMEAAERRNKPVRAGPVFTSDLFYHPQEQLNATLARMGVLAVE
EECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHCCCHHHHHHHHHHHHHHEEE
MEVAGLYGVAAESGARALGLLTVSDHIITGESLTPQERQTTFDEMIELALDVAHAEPTP
EEHHHHEEEHHCCCCCEEEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA