| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108759898
Identifier: 108759898
GI number: 108759898
Start: 2681010
End: 2682806
Strand: Direct
Name: 108759898
Synonym: MXAN_2307
Alternate gene names: NA
Gene position: 2681010-2682806 (Clockwise)
Preceding gene: 108761834
Following gene: 108762515
Centisome position: 29.33
GC content: 70.9
Gene sequence:
>1797_bases GTGCTTTGTGCCCAGCGGGATTCCGGGCCATCCTCCGGCCCGGTGCGTTATCCAATCTGGCTCCTCCTCGTTTGCGCCGG CTGTGCCGCGCGTATTTCCCCCCACGCTGGCACTGCGCCGGCCGCCGCCGTGCGTGCCCAGGACTCCGTCCCCGTGGCCG CCGCCGAGCCGCTACCCGAGGCTCCTCCGCTGGCGTCCGCTTCCGCCACCGAGCCGGTGGCCCCGGTGGCGGAGGCTGCT TCCGCGCCCACGTCCACCGCGGATGACTGCGCGTTGAGCGCGGAGGACCTGGAGCCCGAGGAGGAGGAGCTGGCCGAGGG CGAGGGCGACGACGGCGAGAAGGAGACGCCGGACGCCGTGGCCGCGGGCGCCGCTTCGACAGGGCCGCTCTACTCGGCTG ACATCTCCGATGAGGAGCTGGCGCGGCGGTGGAAGGACGAGATTTCCTCGCTGGGCTCCATGGCAGTGGGTTTCGCGCAC AGCGGCCGGCTGGTGAACGCCAGGCAGTTCCCCCAGGGAGACGACTGGATCGTCGTCACTCCCGCGGGCGCCTGGGCCAC CGAGGAGACCGTCAACTACCTGGCCGACGCCATCCGCGACGTGCGTGCCCGCTTCCCGAATGCGCCTCCGCTGCGGGTCA ATGGGATGAGCCACAAGGAGGGCGGCCACATGCGCCCTCACAAGAGCCACCAGAACGGCCGTGACGTGGACGTGGGCTTC TACTACCCGACGGTGGACCCCATCCGGACCCGCGCGCGCGAGCACGTCATCGACGTGCGCATGAACTGGGAGTTCATCCG CTCGGTGCTCGTGAAGACGGACGTGCAGATGATTCTCGTCGACCGTCGCGTGCGGAAGGTCATCTACGACCACGCCGTGC GCGCGGGCGAGGACAAGGCGTGGTTGGACTCGATTTTCAATGACGGCCCCATGGGCATCGTCCGGCATGCCCGCGGCCAC CGCGACCACTTCCACATCCGCTTCCACAATCCGCGTGCCCAGGAGCTGGGTCGTCGGGTGCAGCCGTTCCTGGCGCTCCA GCCGGAGCACAATGTGACGACGCACCGCATCCGGAACGGTGACACGCTGGGCGGCATCGCGCTCAAGTACGGGTCGTCGG TGGCGATGATCAAGAAGGCCAACCGGATGCGGAACAACTTCCTGCGCGCGGGGAACCGGCTGTCCGTGCCCCTGCGCGGG CCCTGCACGCACTGCCCGGTGCCGCCGCCGCTCGTGCTGCCCACCCGGCGCCTGCCCCCGAACGTGGTGGCGCCGGCGAT GGTTGCCGCCGCTCCCGCGGCGAAGGCGGAGAATGGTTGTGTTCGGACTGAGGGGGCTGTGGCGCAGGGGGCGGCCACCG TCGTTCCCGCGGTGGGCGCGGCCTCCGTCGAGGCGGCATCGACTGTGTTGGCCTCCGCTCCCGTTGGGGAGTCGGCTCCC GTGGTGACGTCGGCTGTGGGGAACTCCGTGGATGCGGCTGCGGTGAAGCCTGCGGCCGGTGGGGCTCTGGACGTGGCTGC GGTGAAGCCTGCTGGAGGGACGTCCGTCAATGTGGCTTCGCCGGTGAAGCCCGCGAACGCCGTCAACGTGGCGTCGACGG TGGTTCCCGTCGCGGCGGAAGGTGCCCTGGCGACGACGCCTGCCGCCACGGATACCGCGGTGGCGCAGCCCGCTTCCGTC AAGGCGGCTCCGGCGGAGCAGACCGCTGCGTCCAGCCCGGCTCCGGCCATGCAGCCCACTGTCGTACCGACGCGCGAGAA GGGCGAGGGCGCCGCGGGCATCACTCACGGCCGCTGA
Upstream 100 bases:
>100_bases TTGGTGGGCAGGCGGGCAGGGGGCCTGTCCGCTCTGAAGGTACGAGAGGGCCGCTCTCGGAGCGCTTTCCAGCGCCGGGG GCGGCCAGATTTCCCGGACG
Downstream 100 bases:
>100_bases CCTGTCCTCCACCGGCCATGCAGGCTTGGGCCCCGTGTCTCCCATGTGGTGACACGGGGCTCGTTCGTTCCGGAGTGTGG TAGGCACGGGCCGTCCATGG
Product: LysM domain-containing protein
Products: NA
Alternate protein names: LysM Domain-Containing Protein; Lysm Domain Protein
Number of amino acids: Translated: 598; Mature: 598
Protein sequence:
>598_residues MLCAQRDSGPSSGPVRYPIWLLLVCAGCAARISPHAGTAPAAAVRAQDSVPVAAAEPLPEAPPLASASATEPVAPVAEAA SAPTSTADDCALSAEDLEPEEEELAEGEGDDGEKETPDAVAAGAASTGPLYSADISDEELARRWKDEISSLGSMAVGFAH SGRLVNARQFPQGDDWIVVTPAGAWATEETVNYLADAIRDVRARFPNAPPLRVNGMSHKEGGHMRPHKSHQNGRDVDVGF YYPTVDPIRTRAREHVIDVRMNWEFIRSVLVKTDVQMILVDRRVRKVIYDHAVRAGEDKAWLDSIFNDGPMGIVRHARGH RDHFHIRFHNPRAQELGRRVQPFLALQPEHNVTTHRIRNGDTLGGIALKYGSSVAMIKKANRMRNNFLRAGNRLSVPLRG PCTHCPVPPPLVLPTRRLPPNVVAPAMVAAAPAAKAENGCVRTEGAVAQGAATVVPAVGAASVEAASTVLASAPVGESAP VVTSAVGNSVDAAAVKPAAGGALDVAAVKPAGGTSVNVASPVKPANAVNVASTVVPVAAEGALATTPAATDTAVAQPASV KAAPAEQTAASSPAPAMQPTVVPTREKGEGAAGITHGR
Sequences:
>Translated_598_residues MLCAQRDSGPSSGPVRYPIWLLLVCAGCAARISPHAGTAPAAAVRAQDSVPVAAAEPLPEAPPLASASATEPVAPVAEAA SAPTSTADDCALSAEDLEPEEEELAEGEGDDGEKETPDAVAAGAASTGPLYSADISDEELARRWKDEISSLGSMAVGFAH SGRLVNARQFPQGDDWIVVTPAGAWATEETVNYLADAIRDVRARFPNAPPLRVNGMSHKEGGHMRPHKSHQNGRDVDVGF YYPTVDPIRTRAREHVIDVRMNWEFIRSVLVKTDVQMILVDRRVRKVIYDHAVRAGEDKAWLDSIFNDGPMGIVRHARGH RDHFHIRFHNPRAQELGRRVQPFLALQPEHNVTTHRIRNGDTLGGIALKYGSSVAMIKKANRMRNNFLRAGNRLSVPLRG PCTHCPVPPPLVLPTRRLPPNVVAPAMVAAAPAAKAENGCVRTEGAVAQGAATVVPAVGAASVEAASTVLASAPVGESAP VVTSAVGNSVDAAAVKPAAGGALDVAAVKPAGGTSVNVASPVKPANAVNVASTVVPVAAEGALATTPAATDTAVAQPASV KAAPAEQTAASSPAPAMQPTVVPTREKGEGAAGITHGR >Mature_598_residues MLCAQRDSGPSSGPVRYPIWLLLVCAGCAARISPHAGTAPAAAVRAQDSVPVAAAEPLPEAPPLASASATEPVAPVAEAA SAPTSTADDCALSAEDLEPEEEELAEGEGDDGEKETPDAVAAGAASTGPLYSADISDEELARRWKDEISSLGSMAVGFAH SGRLVNARQFPQGDDWIVVTPAGAWATEETVNYLADAIRDVRARFPNAPPLRVNGMSHKEGGHMRPHKSHQNGRDVDVGF YYPTVDPIRTRAREHVIDVRMNWEFIRSVLVKTDVQMILVDRRVRKVIYDHAVRAGEDKAWLDSIFNDGPMGIVRHARGH RDHFHIRFHNPRAQELGRRVQPFLALQPEHNVTTHRIRNGDTLGGIALKYGSSVAMIKKANRMRNNFLRAGNRLSVPLRG PCTHCPVPPPLVLPTRRLPPNVVAPAMVAAAPAAKAENGCVRTEGAVAQGAATVVPAVGAASVEAASTVLASAPVGESAP VVTSAVGNSVDAAAVKPAAGGALDVAAVKPAGGTSVNVASPVKPANAVNVASTVVPVAAEGALATTPAATDTAVAQPASV KAAPAEQTAASSPAPAMQPTVVPTREKGEGAAGITHGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62136; Mature: 62136
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCAQRDSGPSSGPVRYPIWLLLVCAGCAARISPHAGTAPAAAVRAQDSVPVAAAEPLPE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCEEECCCCCC APPLASASATEPVAPVAEAASAPTSTADDCALSAEDLEPEEEELAEGEGDDGEKETPDAV CCCCCCCCCCCCCHHHHHHHCCCCCCCHHHCCCHHCCCCCHHHHHCCCCCCCCCCCCHHH AAGAASTGPLYSADISDEELARRWKDEISSLGSMAVGFAHSGRLVNARQFPQGDDWIVVT HCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEE PAGAWATEETVNYLADAIRDVRARFPNAPPLRVNGMSHKEGGHMRPHKSHQNGRDVDVGF CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEE YYPTVDPIRTRAREHVIDVRMNWEFIRSVLVKTDVQMILVDRRVRKVIYDHAVRAGEDKA ECCCCCHHHHHHHHHEEEEEECHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHH WLDSIFNDGPMGIVRHARGHRDHFHIRFHNPRAQELGRRVQPFLALQPEHNVTTHRIRNG HHHHHHCCCCHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCEEEECCCCCCCCEEECCC DTLGGIALKYGSSVAMIKKANRMRNNFLRAGNRLSVPLRGPCTHCPVPPPLVLPTRRLPP CCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC NVVAPAMVAAAPAAKAENGCVRTEGAVAQGAATVVPAVGAASVEAASTVLASAPVGESAP CHHHHHHHHHCCCCCCCCCCEECCCCHHCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCC VVTSAVGNSVDAAAVKPAAGGALDVAAVKPAGGTSVNVASPVKPANAVNVASTVVPVAAE CHHHHHCCCCCHHHCCCCCCCCEEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHCCC GALATTPAATDTAVAQPASVKAAPAEQTAASSPAPAMQPTVVPTREKGEGAAGITHGR CCEECCCCCCCHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLCAQRDSGPSSGPVRYPIWLLLVCAGCAARISPHAGTAPAAAVRAQDSVPVAAAEPLPE CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCEEECCCCCC APPLASASATEPVAPVAEAASAPTSTADDCALSAEDLEPEEEELAEGEGDDGEKETPDAV CCCCCCCCCCCCCHHHHHHHCCCCCCCHHHCCCHHCCCCCHHHHHCCCCCCCCCCCCHHH AAGAASTGPLYSADISDEELARRWKDEISSLGSMAVGFAHSGRLVNARQFPQGDDWIVVT HCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCEEEEE PAGAWATEETVNYLADAIRDVRARFPNAPPLRVNGMSHKEGGHMRPHKSHQNGRDVDVGF CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEE YYPTVDPIRTRAREHVIDVRMNWEFIRSVLVKTDVQMILVDRRVRKVIYDHAVRAGEDKA ECCCCCHHHHHHHHHEEEEEECHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHH WLDSIFNDGPMGIVRHARGHRDHFHIRFHNPRAQELGRRVQPFLALQPEHNVTTHRIRNG HHHHHHCCCCHHHHHHCCCCCCEEEEEECCCHHHHHHHHCCCEEEECCCCCCCCEEECCC DTLGGIALKYGSSVAMIKKANRMRNNFLRAGNRLSVPLRGPCTHCPVPPPLVLPTRRLPP CCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC NVVAPAMVAAAPAAKAENGCVRTEGAVAQGAATVVPAVGAASVEAASTVLASAPVGESAP CHHHHHHHHHCCCCCCCCCCEECCCCHHCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCC VVTSAVGNSVDAAAVKPAAGGALDVAAVKPAGGTSVNVASPVKPANAVNVASTVVPVAAE CHHHHHCCCCCHHHCCCCCCCCEEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHCCC GALATTPAATDTAVAQPASVKAAPAEQTAASSPAPAMQPTVVPTREKGEGAAGITHGR CCEECCCCCCCHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA