Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is ytcJ [H]

Identifier: 108761832

GI number: 108761832

Start: 758380

End: 760182

Strand: Reverse

Name: ytcJ [H]

Synonym: MXAN_0659

Alternate gene names: 108761832

Gene position: 760182-758380 (Counterclockwise)

Preceding gene: 108762807

Following gene: 108763365

Centisome position: 8.32

GC content: 73.16

Gene sequence:

>1803_bases
TTGGCCTCTCCTTCCAGGTGCGCCAGAGTGTCGCGCCGGACGCGCCAGGAATTGGCGCGGGCTTCCAGACAGGTGCCAGA
CATGACGCTACGACGACTCGGTGGTGGACTCCTCGGGGCGGTACTCCTTCTGACAAGCGTTTCGGGCTGCACCCGGCGCG
TGCCGCCCGTGGATGACAATCCGGCCCCCGTGCCAGAGCCCACCGCCACCACGACAGTGTACGTGGCCGAGCGCATCCGG
ACGCTGGACCCGGCGAAGCCCCAGGTGCAGGCGCTCGCGGTGAAGGACGGCAAGGTGCTGGCCACCGGCACCAAGGATGA
GGTGCTCGCCGCCGCGGGCAAGGACGCGCGCGTGGTGGACCTGGGCAGCGCCACGGTGGTGCCGGGCCTCACCGACGCGC
ACGGGCACCTGGCGGGCCTGGGCCGCGGCCTGGTGACGGTGGACCTGCAGGGTGTGGACACCAAGGAGGAGGCCCTGGAG
CGGCTCGCCTCGGCGCCCTCCTCCGCGTTCCAGGGTGAGTGGCTGCTGGGCCGCGGCTGGGACCAGAACGACTGGCCGGA
GAAGGCCTTCCCGTCGCGCGCCGACCTGGACAAGCGCTTTCCCTTGCGGCCGGTGGCGCTGAGCCGCGTGGACGGACACG
CGCTGTGGGTCAACGGCGAGGCGCTGCGGCGCGCCGGCATCACCCGCGACACGAAGGACCCGGCGGGCGGGCGCATCCTC
CGGGGTGAGGGCGGAGAGCCCACCGGCATCCTGGTGGACAACGCCATGGAGCTGGTGGAGTCCGTGCTGCCGCCCGCCAC
GGACGCGCAGCACGCGGCGCAGTTGACCGCGGCGCTCCAGCGCGGCGCGCAAGTGGGCCTCACCGGTGTCCACGACGCGG
GCATGGACCTGCGCACCTTCCGCCTGCTCCAGCGCTGGGACAAGGGAGGCAAGCTGCCGCTGCGCGTCTACGCCATGGCG
GATGGACAGACGGGCGACCGGGAGACGTACCTGAAGGACGGCCCCTATGAGGGGCGCATGCTCACGATGCGCGCGGTGAA
GCTCACCCTGGATGGCGCGCTGGGCAGCCGGGGCGCGGCGCTGCACCAGGACTACAGCGACGAACCCGGCCACCGCGGTC
TGCTGCTGCTGTCCCCCGAGGAGTACGAAGCGCGCGTGCGCGCCTTCATGGCGCGGGGCTTCCAGGTGTGCACGCATGCG
ATTGGAGACCGGGCCAACACGGTGGTGCTGGACGTGCTCGCGCGCGCGGCCGAGGCCACCGGCACGCTCCAGTCCGGCCG
GCACCGCGTGGAGCACGCGCAAATCATGCGCCCCGAGGACATCGAACGGCTGGGCCGCAGCGGCTTCATCGCAAGCGTAC
AGCCCACGCACGCCACCAGCGACATGCCGTGGGCGGAGGCCCGCGTGGGAGCGGAGCGCATCCGCGGGGCCTACGCGTGG
CAGCGGCTGAAGGCGTCCGGCGCGGTGCTGGCGTTGGGCAGCGATTTTCCCGTGGAGCGCCCCAACGTGCTGGCGGGCCT
GTACGCGGCGCGCACGCGTCAGGACGTCCGGGGCCTGCCGGAAGGCGGCTGGTACGGGGAGCAGCGGCTGAGCGGGCAGG
AGGCGCTGGAGGGCTTCACCGTGGGCGCGGCGCACGCATCCTTCGCCGAAGCCCGGCGCGGCCGGCTCCAGCCCGGCATG
GACGCGGACTTCGTGGCCCTGTCGGTGGACCCGGTGGACGGGCCCGTCACCGCGCTGCCCGGCGCCGAGGTGCGGCTGAC
AGTGGTGGCCGGCGTGGAGGTCTACCGCGCCTTCCAGCGCTGA

Upstream 100 bases:

>100_bases
CCAGGTGGAGTCCACGGGCTGCTCGCCGCGCTCGCAGCCCTGCCCCACCAACCTGTAACCGTGCAGTGACGTCAACGCGC
CTGGAGGGGGACACCCATGC

Downstream 100 bases:

>100_bases
GCGCCCAGGACAGTCGGGGAATCCAGGGCGCAACGTGGCTGTCGCGGGGAATTGGCGTGTACTGCTATTTCCGCCGTGTC
GTGGAGTGCTCTAGCATACG

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 600; Mature: 599

Protein sequence:

>600_residues
MASPSRCARVSRRTRQELARASRQVPDMTLRRLGGGLLGAVLLLTSVSGCTRRVPPVDDNPAPVPEPTATTTVYVAERIR
TLDPAKPQVQALAVKDGKVLATGTKDEVLAAAGKDARVVDLGSATVVPGLTDAHGHLAGLGRGLVTVDLQGVDTKEEALE
RLASAPSSAFQGEWLLGRGWDQNDWPEKAFPSRADLDKRFPLRPVALSRVDGHALWVNGEALRRAGITRDTKDPAGGRIL
RGEGGEPTGILVDNAMELVESVLPPATDAQHAAQLTAALQRGAQVGLTGVHDAGMDLRTFRLLQRWDKGGKLPLRVYAMA
DGQTGDRETYLKDGPYEGRMLTMRAVKLTLDGALGSRGAALHQDYSDEPGHRGLLLLSPEEYEARVRAFMARGFQVCTHA
IGDRANTVVLDVLARAAEATGTLQSGRHRVEHAQIMRPEDIERLGRSGFIASVQPTHATSDMPWAEARVGAERIRGAYAW
QRLKASGAVLALGSDFPVERPNVLAGLYAARTRQDVRGLPEGGWYGEQRLSGQEALEGFTVGAAHASFAEARRGRLQPGM
DADFVALSVDPVDGPVTALPGAEVRLTVVAGVEVYRAFQR

Sequences:

>Translated_600_residues
MASPSRCARVSRRTRQELARASRQVPDMTLRRLGGGLLGAVLLLTSVSGCTRRVPPVDDNPAPVPEPTATTTVYVAERIR
TLDPAKPQVQALAVKDGKVLATGTKDEVLAAAGKDARVVDLGSATVVPGLTDAHGHLAGLGRGLVTVDLQGVDTKEEALE
RLASAPSSAFQGEWLLGRGWDQNDWPEKAFPSRADLDKRFPLRPVALSRVDGHALWVNGEALRRAGITRDTKDPAGGRIL
RGEGGEPTGILVDNAMELVESVLPPATDAQHAAQLTAALQRGAQVGLTGVHDAGMDLRTFRLLQRWDKGGKLPLRVYAMA
DGQTGDRETYLKDGPYEGRMLTMRAVKLTLDGALGSRGAALHQDYSDEPGHRGLLLLSPEEYEARVRAFMARGFQVCTHA
IGDRANTVVLDVLARAAEATGTLQSGRHRVEHAQIMRPEDIERLGRSGFIASVQPTHATSDMPWAEARVGAERIRGAYAW
QRLKASGAVLALGSDFPVERPNVLAGLYAARTRQDVRGLPEGGWYGEQRLSGQEALEGFTVGAAHASFAEARRGRLQPGM
DADFVALSVDPVDGPVTALPGAEVRLTVVAGVEVYRAFQR
>Mature_599_residues
ASPSRCARVSRRTRQELARASRQVPDMTLRRLGGGLLGAVLLLTSVSGCTRRVPPVDDNPAPVPEPTATTTVYVAERIRT
LDPAKPQVQALAVKDGKVLATGTKDEVLAAAGKDARVVDLGSATVVPGLTDAHGHLAGLGRGLVTVDLQGVDTKEEALER
LASAPSSAFQGEWLLGRGWDQNDWPEKAFPSRADLDKRFPLRPVALSRVDGHALWVNGEALRRAGITRDTKDPAGGRILR
GEGGEPTGILVDNAMELVESVLPPATDAQHAAQLTAALQRGAQVGLTGVHDAGMDLRTFRLLQRWDKGGKLPLRVYAMAD
GQTGDRETYLKDGPYEGRMLTMRAVKLTLDGALGSRGAALHQDYSDEPGHRGLLLLSPEEYEARVRAFMARGFQVCTHAI
GDRANTVVLDVLARAAEATGTLQSGRHRVEHAQIMRPEDIERLGRSGFIASVQPTHATSDMPWAEARVGAERIRGAYAWQ
RLKASGAVLALGSDFPVERPNVLAGLYAARTRQDVRGLPEGGWYGEQRLSGQEALEGFTVGAAHASFAEARRGRLQPGMD
ADFVALSVDPVDGPVTALPGAEVRLTVVAGVEVYRAFQR

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 64307; Mature: 64176

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASPSRCARVSRRTRQELARASRQVPDMTLRRLGGGLLGAVLLLTSVSGCTRRVPPVDDN
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCC
PAPVPEPTATTTVYVAERIRTLDPAKPQVQALAVKDGKVLATGTKDEVLAAAGKDARVVD
CCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEECCCHHHHHHCCCCCEEEE
LGSATVVPGLTDAHGHLAGLGRGLVTVDLQGVDTKEEALERLASAPSSAFQGEWLLGRGW
CCCCEECCCCCCCCCHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEECCCC
DQNDWPEKAFPSRADLDKRFPLRPVALSRVDGHALWVNGEALRRAGITRDTKDPAGGRIL
CCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCEEEECHHHHHHCCCCCCCCCCCCCEEE
RGEGGEPTGILVDNAMELVESVLPPATDAQHAAQLTAALQRGAQVGLTGVHDAGMDLRTF
ECCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
RLLQRWDKGGKLPLRVYAMADGQTGDRETYLKDGPYEGRMLTMRAVKLTLDGALGSRGAA
HHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCH
LHQDYSDEPGHRGLLLLSPEEYEARVRAFMARGFQVCTHAIGDRANTVVLDVLARAAEAT
HCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
GTLQSGRHRVEHAQIMRPEDIERLGRSGFIASVQPTHATSDMPWAEARVGAERIRGAYAW
CCHHHHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
QRLKASGAVLALGSDFPVERPNVLAGLYAARTRQDVRGLPEGGWYGEQRLSGQEALEGFT
HHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHCCCE
VGAAHASFAEARRGRLQPGMDADFVALSVDPVDGPVTALPGAEVRLTVVAGVEVYRAFQR
ECHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEECCCCCEEEEEEECHHHHHHHCC
>Mature Secondary Structure 
ASPSRCARVSRRTRQELARASRQVPDMTLRRLGGGLLGAVLLLTSVSGCTRRVPPVDDN
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCC
PAPVPEPTATTTVYVAERIRTLDPAKPQVQALAVKDGKVLATGTKDEVLAAAGKDARVVD
CCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEECCCHHHHHHCCCCCEEEE
LGSATVVPGLTDAHGHLAGLGRGLVTVDLQGVDTKEEALERLASAPSSAFQGEWLLGRGW
CCCCEECCCCCCCCCHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEECCCC
DQNDWPEKAFPSRADLDKRFPLRPVALSRVDGHALWVNGEALRRAGITRDTKDPAGGRIL
CCCCCCCCCCCCCCCCCCCCCCCCHHHEECCCCEEEECHHHHHHCCCCCCCCCCCCCEEE
RGEGGEPTGILVDNAMELVESVLPPATDAQHAAQLTAALQRGAQVGLTGVHDAGMDLRTF
ECCCCCCCEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
RLLQRWDKGGKLPLRVYAMADGQTGDRETYLKDGPYEGRMLTMRAVKLTLDGALGSRGAA
HHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCH
LHQDYSDEPGHRGLLLLSPEEYEARVRAFMARGFQVCTHAIGDRANTVVLDVLARAAEAT
HCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
GTLQSGRHRVEHAQIMRPEDIERLGRSGFIASVQPTHATSDMPWAEARVGAERIRGAYAW
CCHHHHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
QRLKASGAVLALGSDFPVERPNVLAGLYAARTRQDVRGLPEGGWYGEQRLSGQEALEGFT
HHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHCCCE
VGAAHASFAEARRGRLQPGMDADFVALSVDPVDGPVTALPGAEVRLTVVAGVEVYRAFQR
ECHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEECCCCCEEEEEEECHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]