Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is 108761751

Identifier: 108761751

GI number: 108761751

Start: 6705408

End: 6706547

Strand: Direct

Name: 108761751

Synonym: MXAN_5386

Alternate gene names: NA

Gene position: 6705408-6706547 (Clockwise)

Preceding gene: 108762341

Following gene: 108759098

Centisome position: 73.37

GC content: 65.53

Gene sequence:

>1140_bases
GTGCAGGGGTGGGCGACCAACCGAACATGGAGCTGCGATAGAGAGGGGCGGAGCATGCAGGTACTCGGAAGCAAGGCGCA
GGGAGCCCGGCTCGAACGCATGAAGGCGTCACCGCGCTTCAAGGACGGGATGTTCCACAACACATCCCTGGTGACTCAGG
GGCTGAAGAAGGGCACCGCTGTCTCGACGATGAAGGAGTTCATCTGTGGCGGTCAGCGGCGGGTGCCGACTGGCGTGCTG
CCCATCGTCAATCCGCTCGAGCAGTGGCTGCTCCCGGTGCAGGGCGGGCTCCGCGCGACGTGGCTCGGTCATTCCACCGT
CCTGCTTGAGGTCGATGGGAAGCGCGTGTTGACTGACCCCGTGTGGGGAGAGCGCATCTCCCCACTTCCCTTCACGGGGC
CGAAGCGGTTTCACCCCGCGCCGGTGACAATCGGTCAGCTTCCTCCGCTCCACGCGGTCGTCATCTCGCACGACCACTAC
GATCACCTCGACTACCCGACCATCCTTCAACTCATCCCGCTCGGGGTTCCGTTCGTCACCTCACTCGGGGTGGGTGCGCA
TCTGGAGGCGTGGGGCGTGCCTCCCGAGCGCATCACCGAGCTCGACTGGTGGGAGTCTGCGGAGGTCGGTGGCCTTACCT
TCACCGCCGCACCATCACAGCACTTCTCGGGTCGCAGCGTGGCCGATAGGAACCGGACGGCGTGGTCGTCGATTGTGGTG
CGCGGTCCGCATCACGCCGTCTTCTTCAGCGGCGACACGGGCCTGACCCAGGAGTACGTCGAGATCCGGCAGAGGCTGGG
ACCGTTCGACCTCATCATGCTCGAGGTCGGCGCGTGGGACCCGGCGTGGGGAGATATTCACCTCGGACCGGAGAATGCGT
TGCAAGCGCACGACCTGTTGGGCGGTGGCGCCTTCTTGCCGGTCCATTGGGGCACGTTCAATCTCGCAATCCATTCCTGG
GACGAACCTGCGGAGACGCTCGTGAAGCTCGCCCCAACGAATGCGCCGCTGATCATGCCTCGGCTCGGGCAGCCGATCGA
GCCGCTCCAGGTGCAGTCGATCGACCCATGGTGGCGCGAGGTCGATCAAACCGAGACGGAACCGGCGCCGGCGGAGGCGG
TGACGGAACCCTCCGACTGA

Upstream 100 bases:

>100_bases
CCTCGGGCCCAGATTCCGGCGCTTCATCATGCTCGCCAAGAGGGCGGCACTGACGGTGGGCTGGACCTTTCGTTCAGCTC
AGTGATCGAATCATGGGCAG

Downstream 100 bases:

>100_bases
CGAATCAGCGCGAAGCGCGCGACAGCACGACTGGCCGGTGTCGAAGGATGCGGCATCCGAACAGAGCCAGAGCGCCGCGG
CCGCGGCCTCGGCCTCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MQGWATNRTWSCDREGRSMQVLGSKAQGARLERMKASPRFKDGMFHNTSLVTQGLKKGTAVSTMKEFICGGQRRVPTGVL
PIVNPLEQWLLPVQGGLRATWLGHSTVLLEVDGKRVLTDPVWGERISPLPFTGPKRFHPAPVTIGQLPPLHAVVISHDHY
DHLDYPTILQLIPLGVPFVTSLGVGAHLEAWGVPPERITELDWWESAEVGGLTFTAAPSQHFSGRSVADRNRTAWSSIVV
RGPHHAVFFSGDTGLTQEYVEIRQRLGPFDLIMLEVGAWDPAWGDIHLGPENALQAHDLLGGGAFLPVHWGTFNLAIHSW
DEPAETLVKLAPTNAPLIMPRLGQPIEPLQVQSIDPWWREVDQTETEPAPAEAVTEPSD

Sequences:

>Translated_379_residues
MQGWATNRTWSCDREGRSMQVLGSKAQGARLERMKASPRFKDGMFHNTSLVTQGLKKGTAVSTMKEFICGGQRRVPTGVL
PIVNPLEQWLLPVQGGLRATWLGHSTVLLEVDGKRVLTDPVWGERISPLPFTGPKRFHPAPVTIGQLPPLHAVVISHDHY
DHLDYPTILQLIPLGVPFVTSLGVGAHLEAWGVPPERITELDWWESAEVGGLTFTAAPSQHFSGRSVADRNRTAWSSIVV
RGPHHAVFFSGDTGLTQEYVEIRQRLGPFDLIMLEVGAWDPAWGDIHLGPENALQAHDLLGGGAFLPVHWGTFNLAIHSW
DEPAETLVKLAPTNAPLIMPRLGQPIEPLQVQSIDPWWREVDQTETEPAPAEAVTEPSD
>Mature_379_residues
MQGWATNRTWSCDREGRSMQVLGSKAQGARLERMKASPRFKDGMFHNTSLVTQGLKKGTAVSTMKEFICGGQRRVPTGVL
PIVNPLEQWLLPVQGGLRATWLGHSTVLLEVDGKRVLTDPVWGERISPLPFTGPKRFHPAPVTIGQLPPLHAVVISHDHY
DHLDYPTILQLIPLGVPFVTSLGVGAHLEAWGVPPERITELDWWESAEVGGLTFTAAPSQHFSGRSVADRNRTAWSSIVV
RGPHHAVFFSGDTGLTQEYVEIRQRLGPFDLIMLEVGAWDPAWGDIHLGPENALQAHDLLGGGAFLPVHWGTFNLAIHSW
DEPAETLVKLAPTNAPLIMPRLGQPIEPLQVQSIDPWWREVDQTETEPAPAEAVTEPSD

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To K.pneumoniae romA [H]

Homologues:

Organism=Homo sapiens, GI170932483, Length=250, Percent_Identity=42, Blast_Score=193, Evalue=2e-49,
Organism=Homo sapiens, GI170932481, Length=250, Percent_Identity=42, Blast_Score=193, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI17543100, Length=258, Percent_Identity=36.4341085271318, Blast_Score=171, Evalue=8e-43,
Organism=Caenorhabditis elegans, GI17543102, Length=258, Percent_Identity=36.4341085271318, Blast_Score=171, Evalue=8e-43,
Organism=Caenorhabditis elegans, GI25148824, Length=258, Percent_Identity=36.4341085271318, Blast_Score=170, Evalue=9e-43,
Organism=Caenorhabditis elegans, GI17543104, Length=272, Percent_Identity=35.6617647058824, Blast_Score=167, Evalue=6e-42,
Organism=Saccharomyces cerevisiae, GI6325154, Length=244, Percent_Identity=32.3770491803279, Blast_Score=119, Evalue=7e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41762; Mature: 41762

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGWATNRTWSCDREGRSMQVLGSKAQGARLERMKASPRFKDGMFHNTSLVTQGLKKGTA
CCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHH
VSTMKEFICGGQRRVPTGVLPIVNPLEQWLLPVQGGLRATWLGHSTVLLEVDGKRVLTDP
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCCEEEECC
VWGERISPLPFTGPKRFHPAPVTIGQLPPLHAVVISHDHYDHLDYPTILQLIPLGVPFVT
CCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCHHHH
SLGVGAHLEAWGVPPERITELDWWESAEVGGLTFTAAPSQHFSGRSVADRNRTAWSSIVV
HCCCCCEEHCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEE
RGPHHAVFFSGDTGLTQEYVEIRQRLGPFDLIMLEVGAWDPAWGDIHLGPENALQAHDLL
ECCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEECCHHHHHHHHHC
GGGAFLPVHWGTFNLAIHSWDEPAETLVKLAPTNAPLIMPRLGQPIEPLQVQSIDPWWRE
CCCEEEEEEECEEEEEEECCCCHHHHHHEECCCCCCEECCCCCCCCCCCEECCCCHHHHH
VDQTETEPAPAEAVTEPSD
HCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MQGWATNRTWSCDREGRSMQVLGSKAQGARLERMKASPRFKDGMFHNTSLVTQGLKKGTA
CCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHCCHH
VSTMKEFICGGQRRVPTGVLPIVNPLEQWLLPVQGGLRATWLGHSTVLLEVDGKRVLTDP
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCCEEEECC
VWGERISPLPFTGPKRFHPAPVTIGQLPPLHAVVISHDHYDHLDYPTILQLIPLGVPFVT
CCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCHHHH
SLGVGAHLEAWGVPPERITELDWWESAEVGGLTFTAAPSQHFSGRSVADRNRTAWSSIVV
HCCCCCEEHCCCCCHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEEE
RGPHHAVFFSGDTGLTQEYVEIRQRLGPFDLIMLEVGAWDPAWGDIHLGPENALQAHDLL
ECCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEECCHHHHHHHHHC
GGGAFLPVHWGTFNLAIHSWDEPAETLVKLAPTNAPLIMPRLGQPIEPLQVQSIDPWWRE
CCCEEEEEEECEEEEEEECCCCHHHHHHEECCCCCCEECCCCCCCCCCCEECCCCHHHHH
VDQTETEPAPAEAVTEPSD
HCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]