| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yhhW [C]
Identifier: 108761738
GI number: 108761738
Start: 5362181
End: 5362876
Strand: Direct
Name: yhhW [C]
Synonym: MXAN_4357
Alternate gene names: 108761738
Gene position: 5362181-5362876 (Clockwise)
Preceding gene: 108762266
Following gene: 108762015
Centisome position: 58.67
GC content: 69.4
Gene sequence:
>696_bases ATGATTGCCATTCGCCCCTCGGAAGCCCGCGGTCACGCCAACCACGGTTGGCTGGACTCCCACCACACCTTCTCCTTCGC CGGTTACTACGACCCGGACTTCATGGGCTTCCGAGCCCTGCGCGTCATCAACGAGGACCGCGTCGCGCCCCATGAGGGCT TCGGTACGCACCCTCACCGGGACATGGAAATCATCACCTACCCGCTGAGCGGCGCCATTGCCCACCGCGACAGCACGGGC GGCGAGGGCCTGCTGCGCGCCGGTGAAATCCAGCGGATGACGGCCGGCACCGGTGTGCTGCACAGCGAGATGAACGGCGC GGATGAGAACCTCCACTTCCTGCAGATCTGGATCATCCCGGACCGCAAGGGCCTGACGCCTGGCTACGAGCAGAAGGCCT TCCCGGAGGCCGAGCGCCAGGGCCGCTGGCGGGTGGTGGCCAGCCCGGACGCCCGCGACGGCAGCCTCACGGTGCACCAG GACGTGGTGCTTCACGCGACGCTGCTGGGCACGGGCGAGCAGGCGACGTACACGCTCGCTCCGGGCCGCCACGCCTGGCT GCAGTTGGCGCGGGGCAAGGCCACGCTCAACGGCGTTGAGTTGAAGGCGGGGGACGGCGCCGCGGTGGCGGACGAGTCGC AGCTCGTCCTCTCCGCCACGGAGCCGGTGGAAGCGCTGCTGTTCGACCTGGCCTGA
Upstream 100 bases:
>100_bases TGCTTCCCATTGTCCACGCCTAGTCCCGAAAGGCCCTCGCGCACATCATGACTCTCGAAACAGCGGCCGCCATCCAGGTT CTGCCGCGGAAAGGAACGCC
Downstream 100 bases:
>100_bases GGCCACATCGCTGAATGAAAGAGAGCACGACATGAGCCGGGACGACTTGAACGCGGAGCAGCTTCCTCCTTCGATGGAGA CACTCATCGTCGCACCCTCA
Product: pirin family protein
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein sll1773 [H]
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MIAIRPSEARGHANHGWLDSHHTFSFAGYYDPDFMGFRALRVINEDRVAPHEGFGTHPHRDMEIITYPLSGAIAHRDSTG GEGLLRAGEIQRMTAGTGVLHSEMNGADENLHFLQIWIIPDRKGLTPGYEQKAFPEAERQGRWRVVASPDARDGSLTVHQ DVVLHATLLGTGEQATYTLAPGRHAWLQLARGKATLNGVELKAGDGAAVADESQLVLSATEPVEALLFDLA
Sequences:
>Translated_231_residues MIAIRPSEARGHANHGWLDSHHTFSFAGYYDPDFMGFRALRVINEDRVAPHEGFGTHPHRDMEIITYPLSGAIAHRDSTG GEGLLRAGEIQRMTAGTGVLHSEMNGADENLHFLQIWIIPDRKGLTPGYEQKAFPEAERQGRWRVVASPDARDGSLTVHQ DVVLHATLLGTGEQATYTLAPGRHAWLQLARGKATLNGVELKAGDGAAVADESQLVLSATEPVEALLFDLA >Mature_231_residues MIAIRPSEARGHANHGWLDSHHTFSFAGYYDPDFMGFRALRVINEDRVAPHEGFGTHPHRDMEIITYPLSGAIAHRDSTG GEGLLRAGEIQRMTAGTGVLHSEMNGADENLHFLQIWIIPDRKGLTPGYEQKAFPEAERQGRWRVVASPDARDGSLTVHQ DVVLHATLLGTGEQATYTLAPGRHAWLQLARGKATLNGVELKAGDGAAVADESQLVLSATEPVEALLFDLA
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=126, Percent_Identity=32.5396825396825, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI4505823, Length=126, Percent_Identity=32.5396825396825, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1789847, Length=231, Percent_Identity=53.2467532467532, Blast_Score=251, Evalue=3e-68, Organism=Escherichia coli, GI1789493, Length=238, Percent_Identity=34.8739495798319, Blast_Score=129, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 25175; Mature: 25175
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAIRPSEARGHANHGWLDSHHTFSFAGYYDPDFMGFRALRVINEDRVAPHEGFGTHPHR CEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCHHCEEEEEEECCCCCCCCCCCCCCCCC DMEIITYPLSGAIAHRDSTGGEGLLRAGEIQRMTAGTGVLHSEMNGADENLHFLQIWIIP CEEEEEEECCCEEEECCCCCCCCEEECCCEEEEECCCCEEECCCCCCCCCEEEEEEEEEE DRKGLTPGYEQKAFPEAERQGRWRVVASPDARDGSLTVHQDVVLHATLLGTGEQATYTLA CCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCEEEECCEEEEEEEECCCCCEEEEEC PGRHAWLQLARGKATLNGVELKAGDGAAVADESQLVLSATEPVEALLFDLA CCCHHEEEEECCCCEECCEEEECCCCCEEECCCEEEEECCCCHHHHHEECC >Mature Secondary Structure MIAIRPSEARGHANHGWLDSHHTFSFAGYYDPDFMGFRALRVINEDRVAPHEGFGTHPHR CEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCHHCEEEEEEECCCCCCCCCCCCCCCCC DMEIITYPLSGAIAHRDSTGGEGLLRAGEIQRMTAGTGVLHSEMNGADENLHFLQIWIIP CEEEEEEECCCEEEECCCCCCCCEEECCCEEEEECCCCEEECCCCCCCCCEEEEEEEEEE DRKGLTPGYEQKAFPEAERQGRWRVVASPDARDGSLTVHQDVVLHATLLGTGEQATYTLA CCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCCEEEECCEEEEEEEECCCCCEEEEEC PGRHAWLQLARGKATLNGVELKAGDGAAVADESQLVLSATEPVEALLFDLA CCCHHEEEEECCCCEECCEEEECCCCCEEECCCEEEEECCCCHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]