| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is treZ [H]
Identifier: 108761737
GI number: 108761737
Start: 621391
End: 623256
Strand: Direct
Name: treZ [H]
Synonym: MXAN_0541
Alternate gene names: 108761737
Gene position: 621391-623256 (Clockwise)
Preceding gene: 108758391
Following gene: 108761859
Centisome position: 6.8
GC content: 70.42
Gene sequence:
>1866_bases ATGCCCATGGGTCCAGCGGATGAGTCTCGGGCAGCGCGGTCGAAGGCCCCTCTCTTGGGGGCGTGGGTGGAGGCGGGTGA GCGGGTGCGGTGGCGTGTCTGGGCGCCCGGCCACCAGCGCGTGGAGGTGGTGCTGCACGACGCGCAAGGCAATCCGGGCC GCGTCTTGCCGATGACGCCGGAGCCCGGCGACTGCTTCGGTGCGGTGCTGGAAGGGCAGGGCGCGGGGCTTCGCTACAAG CTGCGCGTGGATGGCGAAGGCCCCTTCCCGGACCCGTGGTCGCGTTCGCAGCCCCAGGGCGTGCATGGGCCGTCCGAAGT GGTGGTGCCCGACTTCGCCTGGACGGACGCGGGCTGGAAGGGCGTGGCGCCGCAGGCGCTGGTCATCTACGAGGTGCACG TGGGCACGGCCACGCCCGAAGGCACCTTCGAGTCGCTCATCCCGCGTCTGGCCGGCCTCAAGGAGCTGGGCATCACCGCG CTGGAGCTGATGCCGGTGGCGTCCTTCCCGGGACGCCGCAACTGGGGCTACGACGGCGTGAGCCTGTTCGCGCCCCAGCA GGCCTACGGCGGTCCGGAGGGGCTGCGCCGGTTGGTGGACGCCGCGCACGCGCACGGGCTCGCGGTGCTGATGGACGCCG TCTACAACCACTTCGGACCGGATGGGAATTACCTGCGGGTGTATTCGCCGCACTACTTCACCGGCCGCCACCACACGCCG TGGGGCGACGCGGTGAACTACGACGGCGAAGGCAGCGCCCACGCGCGGACCCAGGTGCTGGCCAACGTGGAGATGTGGAT TGCTGACTACCACCTGGACGGCCTGCGCCTGGACGCCGCGCACGCCATCATCGACGACGGCACGCCGCACCTGCTCACCG AGGTCGCCGAGCGGGCGCGGGCCTGCGCGCCGGGCCGGAAGGTGCATGTCATCGCCGAGGACGAGCGCAACGAGCGGCGC CTGATGCGCCCCGCGTCGGAGGGCGGCCTGGGGCTGGACGGCGTGTGGGCGGATGACTTCCACCACCAACTGCGCCGCGC CTTCGCGGGGGACAGCGACGGCTACTACCAGGACTACACGGGCAACACGGAGGACCTGGCGCGCACGCTGAACCAGGGCT GGTTCTACGAAGGGCAGGTGTCGAAGAACCTGGGCCATGCGCGAGGCACGAAGGCGGATGGGCTGGAGCCCTGGCGCTTC GTCCACTGCATCCAGAACCATGACCAGGTGGGCAACCGTGCCTTCGGCGAGCGGCTGGGGCACGACGTGAGCCCCGCGGC CTTCCGCGCCATGAGTGGACTGCTGCTGCTGTCTCCCTACACGCCCATGCTCTTCATGGGGCAGGAGTGGAACGCCAGCA CGCCCTTCCTCTACTTCACCGAGCACCACGCGGAGCTGGGCAAGCTCGTCACGGAGGGCCGGCGAAAGGAGTTCGCCGGG TTCGCGCGCTTCGCGGGCGCGGAGGTGCCGGACCCGCAAGCGGACGACACCTTCACCCGCTCTCAACTGGACTGGGCGGA GGCGGAGCAGCCAGGGCATGCGGGCGTGCGAGCGCTCTACCGGGAGCTGCTCCGTCTGCGCGCATCGGAGCCCGCCCTGC GCGAGACGGGGCGGGGCTCCTATGCGGCCCGGGCCCTGGGGCCGGACGCACTGGTGCTCGAACGGCGTGGGGGCGGCCAG CGACTGCAGGTGTTGCTCAGCCTGCGCGGCGCGCTGGATTATCCGGTGCCCGCCGGCTCGGCGCTGGTGCTGTGGACTGA AGACGCTTGCTTCGGCGGCTCCGAAAAATTGCAGCCATTGAAGCAAGACACGGTGCGGTTGAAGGGTTCGGCTCTGGCTG TGATAAGACTTCCCGCCAAAGACTGA
Upstream 100 bases:
>100_bases CTTCCGGGCACCATGCCTACCCGTGAACATCCGCCGCGCGGCGGGCGCGTCCGGCCACACGGAGTGCTCCTCAAGGGCAG GGGTGACGCATTACAGGGAC
Downstream 100 bases:
>100_bases GAAACGCGCCGTGTTTCATTGCATGTATCGCTGCAGGGCGAGCGGGCATGGCTGAAAACATGCTCAAGAAATGTCGTGGG AATTCCATATCGACTCAAAG
Product: malto-oligosyltrehalose trehalohydrolase
Products: NA
Alternate protein names: MTHase; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase; Maltooligosyl trehalose trehalohydrolase [H]
Number of amino acids: Translated: 621; Mature: 620
Protein sequence:
>621_residues MPMGPADESRAARSKAPLLGAWVEAGERVRWRVWAPGHQRVEVVLHDAQGNPGRVLPMTPEPGDCFGAVLEGQGAGLRYK LRVDGEGPFPDPWSRSQPQGVHGPSEVVVPDFAWTDAGWKGVAPQALVIYEVHVGTATPEGTFESLIPRLAGLKELGITA LELMPVASFPGRRNWGYDGVSLFAPQQAYGGPEGLRRLVDAAHAHGLAVLMDAVYNHFGPDGNYLRVYSPHYFTGRHHTP WGDAVNYDGEGSAHARTQVLANVEMWIADYHLDGLRLDAAHAIIDDGTPHLLTEVAERARACAPGRKVHVIAEDERNERR LMRPASEGGLGLDGVWADDFHHQLRRAFAGDSDGYYQDYTGNTEDLARTLNQGWFYEGQVSKNLGHARGTKADGLEPWRF VHCIQNHDQVGNRAFGERLGHDVSPAAFRAMSGLLLLSPYTPMLFMGQEWNASTPFLYFTEHHAELGKLVTEGRRKEFAG FARFAGAEVPDPQADDTFTRSQLDWAEAEQPGHAGVRALYRELLRLRASEPALRETGRGSYAARALGPDALVLERRGGGQ RLQVLLSLRGALDYPVPAGSALVLWTEDACFGGSEKLQPLKQDTVRLKGSALAVIRLPAKD
Sequences:
>Translated_621_residues MPMGPADESRAARSKAPLLGAWVEAGERVRWRVWAPGHQRVEVVLHDAQGNPGRVLPMTPEPGDCFGAVLEGQGAGLRYK LRVDGEGPFPDPWSRSQPQGVHGPSEVVVPDFAWTDAGWKGVAPQALVIYEVHVGTATPEGTFESLIPRLAGLKELGITA LELMPVASFPGRRNWGYDGVSLFAPQQAYGGPEGLRRLVDAAHAHGLAVLMDAVYNHFGPDGNYLRVYSPHYFTGRHHTP WGDAVNYDGEGSAHARTQVLANVEMWIADYHLDGLRLDAAHAIIDDGTPHLLTEVAERARACAPGRKVHVIAEDERNERR LMRPASEGGLGLDGVWADDFHHQLRRAFAGDSDGYYQDYTGNTEDLARTLNQGWFYEGQVSKNLGHARGTKADGLEPWRF VHCIQNHDQVGNRAFGERLGHDVSPAAFRAMSGLLLLSPYTPMLFMGQEWNASTPFLYFTEHHAELGKLVTEGRRKEFAG FARFAGAEVPDPQADDTFTRSQLDWAEAEQPGHAGVRALYRELLRLRASEPALRETGRGSYAARALGPDALVLERRGGGQ RLQVLLSLRGALDYPVPAGSALVLWTEDACFGGSEKLQPLKQDTVRLKGSALAVIRLPAKD >Mature_620_residues PMGPADESRAARSKAPLLGAWVEAGERVRWRVWAPGHQRVEVVLHDAQGNPGRVLPMTPEPGDCFGAVLEGQGAGLRYKL RVDGEGPFPDPWSRSQPQGVHGPSEVVVPDFAWTDAGWKGVAPQALVIYEVHVGTATPEGTFESLIPRLAGLKELGITAL ELMPVASFPGRRNWGYDGVSLFAPQQAYGGPEGLRRLVDAAHAHGLAVLMDAVYNHFGPDGNYLRVYSPHYFTGRHHTPW GDAVNYDGEGSAHARTQVLANVEMWIADYHLDGLRLDAAHAIIDDGTPHLLTEVAERARACAPGRKVHVIAEDERNERRL MRPASEGGLGLDGVWADDFHHQLRRAFAGDSDGYYQDYTGNTEDLARTLNQGWFYEGQVSKNLGHARGTKADGLEPWRFV HCIQNHDQVGNRAFGERLGHDVSPAAFRAMSGLLLLSPYTPMLFMGQEWNASTPFLYFTEHHAELGKLVTEGRRKEFAGF ARFAGAEVPDPQADDTFTRSQLDWAEAEQPGHAGVRALYRELLRLRASEPALRETGRGSYAARALGPDALVLERRGGGQR LQVLLSLRGALDYPVPAGSALVLWTEDACFGGSEKLQPLKQDTVRLKGSALAVIRLPAKD
Specific function: Catalyzes The Formation Of The Alpha-1,6-Glucosidic Linkages In Glycogen By Scission Of A 1,4-Alpha-Linked Oligosaccharide From Growing Alpha-1,4-Glucan Chains And The Subsequent Attachment Of The Oligosaccharide To The Alpha-1,6 Position. Has A Preferenc
COG id: COG0296
COG function: function code G; 1,4-alpha-glucan branching enzyme
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Homo sapiens, GI189458812, Length=528, Percent_Identity=24.0530303030303, Blast_Score=91, Evalue=3e-18, Organism=Escherichia coli, GI1789839, Length=283, Percent_Identity=29.6819787985866, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI2367229, Length=342, Percent_Identity=28.6549707602339, Blast_Score=74, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17554896, Length=180, Percent_Identity=30, Blast_Score=76, Evalue=5e-14, Organism=Caenorhabditis elegans, GI32564391, Length=180, Percent_Identity=30, Blast_Score=76, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6320826, Length=180, Percent_Identity=30.5555555555556, Blast_Score=80, Evalue=6e-16, Organism=Drosophila melanogaster, GI28573410, Length=242, Percent_Identity=28.099173553719, Blast_Score=87, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006047 - InterPro: IPR004193 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR013783 - InterPro: IPR014756 - InterPro: IPR022567 - InterPro: IPR012768 [H]
Pfam domain/function: PF00128 Alpha-amylase; PF02922 CBM_48; PF11941 DUF3459 [H]
EC number: =3.2.1.141 [H]
Molecular weight: Translated: 68027; Mature: 67896
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMGPADESRAARSKAPLLGAWVEAGERVRWRVWAPGHQRVEVVLHDAQGNPGRVLPMTP CCCCCCCHHHHHHHCCCEEHHHHHCCCEEEEEEECCCCCEEEEEEECCCCCCCEEEECCC EPGDCFGAVLEGQGAGLRYKLRVDGEGPFPDPWSRSQPQGVHGPSEVVVPDFAWTDAGWK CCCCHHHHEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCEECCCCCC GVAPQALVIYEVHVGTATPEGTFESLIPRLAGLKELGITALELMPVASFPGRRNWGYDGV CCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCHHHHCCEEEEEEECCCCCCCCCCCCCCE SLFAPQQAYGGPEGLRRLVDAAHAHGLAVLMDAVYNHFGPDGNYLRVYSPHYFTGRHHTP EEECCHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEECCCEECCCCCCC WGDAVNYDGEGSAHARTQVLANVEMWIADYHLDGLRLDAAHAIIDDGTPHLLTEVAERAR CCCCCCCCCCCCCHHHHHHHHHHEEEEEEEECCCEEEEHHHHEECCCCHHHHHHHHHHHH ACAPGRKVHVIAEDERNERRLMRPASEGGLGLDGVWADDFHHQLRRAFAGDSDGYYQDYT HCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCC GNTEDLARTLNQGWFYEGQVSKNLGHARGTKADGLEPWRFVHCIQNHDQVGNRAFGERLG CCHHHHHHHHHCCCEEECCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHC HDVSPAAFRAMSGLLLLSPYTPMLFMGQEWNASTPFLYFTEHHAELGKLVTEGRRKEFAG CCCCHHHHHHHCCEEEECCCCCEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH FARFAGAEVPDPQADDTFTRSQLDWAEAEQPGHAGVRALYRELLRLRASEPALRETGRGS HHHHCCCCCCCCCCCCCHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCC YAARALGPDALVLERRGGGQRLQVLLSLRGALDYPVPAGSALVLWTEDACFGGSEKLQPL EEEHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHCCHH KQDTVRLKGSALAVIRLPAKD HHHHEEECCCEEEEEEECCCC >Mature Secondary Structure PMGPADESRAARSKAPLLGAWVEAGERVRWRVWAPGHQRVEVVLHDAQGNPGRVLPMTP CCCCCCHHHHHHHCCCEEHHHHHCCCEEEEEEECCCCCEEEEEEECCCCCCCEEEECCC EPGDCFGAVLEGQGAGLRYKLRVDGEGPFPDPWSRSQPQGVHGPSEVVVPDFAWTDAGWK CCCCHHHHEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCEECCCCCC GVAPQALVIYEVHVGTATPEGTFESLIPRLAGLKELGITALELMPVASFPGRRNWGYDGV CCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCHHHHCCEEEEEEECCCCCCCCCCCCCCE SLFAPQQAYGGPEGLRRLVDAAHAHGLAVLMDAVYNHFGPDGNYLRVYSPHYFTGRHHTP EEECCHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEEEEECCCEECCCCCCC WGDAVNYDGEGSAHARTQVLANVEMWIADYHLDGLRLDAAHAIIDDGTPHLLTEVAERAR CCCCCCCCCCCCCHHHHHHHHHHEEEEEEEECCCEEEEHHHHEECCCCHHHHHHHHHHHH ACAPGRKVHVIAEDERNERRLMRPASEGGLGLDGVWADDFHHQLRRAFAGDSDGYYQDYT HCCCCCEEEEEECCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCC GNTEDLARTLNQGWFYEGQVSKNLGHARGTKADGLEPWRFVHCIQNHDQVGNRAFGERLG CCHHHHHHHHHCCCEEECCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHC HDVSPAAFRAMSGLLLLSPYTPMLFMGQEWNASTPFLYFTEHHAELGKLVTEGRRKEFAG CCCCHHHHHHHCCEEEECCCCCEEEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHH FARFAGAEVPDPQADDTFTRSQLDWAEAEQPGHAGVRALYRELLRLRASEPALRETGRGS HHHHCCCCCCCCCCCCCHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCC YAARALGPDALVLERRGGGQRLQVLLSLRGALDYPVPAGSALVLWTEDACFGGSEKLQPL EEEHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHCCHH KQDTVRLKGSALAVIRLPAKD HHHHEEECCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]