| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is f1pep1 [H]
Identifier: 108761577
GI number: 108761577
Start: 6798501
End: 6800579
Strand: Direct
Name: f1pep1 [H]
Synonym: MXAN_5460
Alternate gene names: 108761577
Gene position: 6798501-6800579 (Clockwise)
Preceding gene: 108763068
Following gene: 108760386
Centisome position: 74.38
GC content: 69.17
Gene sequence:
>2079_bases ATGACGCCCGTGGACCGGACCTGCAAGTCCCCCTCCGCACGCAGAGACGCGCGGAGCGGCTACACGCTGCACGGACAGCG CTTCGACGACCCCTACGCGTGGATGGAGCAGCTCGATGCGCCGGAGACGCAGGCGTGGATTTCCGAGCAGGAGGCCCTCA CGCAATCGGTGCTCCACGCCCTCCCTGGACGCGAGGCACTGCGCGAAGCGGTCACCCGCTCCGCGCGGCACGCACGCAGG TCCCCGCCCATTGCCGCCGGTCCGGGGGGGCGTGAGTTCCTCTGGCAGGCAGAGGCGCGCGACGACAAGCTCAAGCTCCT GCTCCGGCGCCACGAAGGGGCGCCGTTGGAGACGTTGCTCGACCCCAACACGTGGGCGAGCAACGAGGTGCTCGTCTTCG CGGTCCCCTCCCCGGATGGCGCATTCGTCGCGTTCGGCAAGGCCGTGGGAAGCGCCCACGGCGCATTGATTCACGTCCTC GAGGTCTCGACGGGGAGGCTGCTGCCGGACCGCCCCCGAGGCACCAGCCACGCCTCGGTGGCCTGGCGGCCCGATGCATC CGGGTTCTTCTACGCCGCGAACCCCGACCCCGGCGAGGTGCCCACGGGCGAAGAGGCTCACTGGAACGCCGTCTACGAGC ACCGGCTGGGCTCGGGCGCCCCCGCGCGGCGCGTCTTCGGTGATGACCACGAAAAGGAGTACTGGTGCACCGTCAAGGTG AGCGAGTGCGGCCGCTTCGCCGTGCTCGCGAAGTGGGACTACGTCCACGCCAACGTCATCACCCTGCTGCGCCTCGCGGA TGATGCGCGCATCCCTGTGGCAACAGCCATGACCTCCCTCAATCAGGTGCAGGTCATCGGGGAGTCCCTGCTCATCCATA CCGACCTCGACGCACCACGAGGCAGGCTCTGCACCGCGCCGCTGACGGCGCCCACCCAGTGGCGGACGCTCATCCCGGAA AGCGAGCACACCCTTCAGACTGTCGCAGGCGTCGGCGGCCGGCTCTACGCCGTCTATTCACGCGCGGCGTCGCACCACGT GCGCATCCACGCCGAGGACGGCACCTGGCTGCGCGACCTGAAGCTCCCAGCCCTGGGCGCCGTAAATCGCAACGAAGGAG AGGGAATCGTCAGCGGCGTCAGTGGCCCATGGCGGGGCGACGAGGTGTGGGTGAACTTCATGTCGTACGTGCAGGCCCCC TCTGTCTATCGCTACGACTACGACGCAGACCTGCTGACGCCGTACCACGTCCCTGACGTCGGGCTCGATGCGTCCGAGTA CGTGACGGAGCAGGTCTGGTATCCGTCGCTCGACGGCACCCGGGTCTCCATGTTCCTCGTCCACCGGAAGGACCTGCCGC GCGACGGACAGTGGCCCGTGAGGCTGAGTGGCTACGGCGGCTTCAACATCTCCGTGGAGCCGCGCTTCACGTCGCTCCAA GCCGCCTGGCTGAAGTGGGGCGGCGTGCTGGCCTTCGCCAACGTCCGGGGCGGCGGAGAGTACGGCCGCGCCTGGCACGA GGCGGCCCTCAAGACACGCCGGCAGAACGCCTTCGACGACTTCATCGCGGCGGCGCGCTGGCTCGTCTCGGAGGGCTACA CGGTGCCTGCCCGGCTGGCCTCGCGAGGAAACAGCAATGGTGGGCTGCTGGTCGCCGTCACCGCCATGCAGGCCCCCGCG TCCTTTGGTGCCGTCTTCTGCCGCGCGCCCACGCTCGACATGCTGCGCTTCCCGAGCTTCGGCTACCTGAGCTCGGCCAC CGTCGAATACGGCTCACCCGAGGACCCGGTTGAGGGTGCCTACCTCGCGGGGTACTCGCCCTACCACAATGTCAGAGCCG GGCTCCGTTACCCCCGGATGGCCTTCGTCGCCGCGCTGAACGACCGGACCGCCCCACCCCACGACCCGCTGAAGATGGTC GCCAGACTTCAGGCAGAAGGCACGCAGGGCGGGCCCTTTCTCCTGCTCCCGCTTCGCGACTCCGGGCATGGGGGCGGCAC CACCCTGACGGCGCTCATCGAGCAGGACGTCGACGAGCTCTGCTTCTACTGTGGGGCGCTCGGCGTCTCACCGGGCTGA
Upstream 100 bases:
>100_bases GCCGCGCGAAGGTGGCCCCCGCGCGGTTGGGCTACAACCTCGCCGCGCCTTCCTGCATGAACGTCCGCGCCAGGACCGAC GCCCCGTGGAGGAACATCCG
Downstream 100 bases:
>100_bases GGCACCTGCGCCGCAGGGCCCGGCCCCCAGAGCCCCCGAGGCCGCTGGAGAATTCGGCGTCCGACGACGTCAAGCGCCCC ACCACCCCGGGGCTTCTTGA
Product: S9A family peptidase
Products: NA
Alternate protein names: Post-proline cleaving enzyme; Proline-specific endopeptidase; PE; PSE [H]
Number of amino acids: Translated: 692; Mature: 691
Protein sequence:
>692_residues MTPVDRTCKSPSARRDARSGYTLHGQRFDDPYAWMEQLDAPETQAWISEQEALTQSVLHALPGREALREAVTRSARHARR SPPIAAGPGGREFLWQAEARDDKLKLLLRRHEGAPLETLLDPNTWASNEVLVFAVPSPDGAFVAFGKAVGSAHGALIHVL EVSTGRLLPDRPRGTSHASVAWRPDASGFFYAANPDPGEVPTGEEAHWNAVYEHRLGSGAPARRVFGDDHEKEYWCTVKV SECGRFAVLAKWDYVHANVITLLRLADDARIPVATAMTSLNQVQVIGESLLIHTDLDAPRGRLCTAPLTAPTQWRTLIPE SEHTLQTVAGVGGRLYAVYSRAASHHVRIHAEDGTWLRDLKLPALGAVNRNEGEGIVSGVSGPWRGDEVWVNFMSYVQAP SVYRYDYDADLLTPYHVPDVGLDASEYVTEQVWYPSLDGTRVSMFLVHRKDLPRDGQWPVRLSGYGGFNISVEPRFTSLQ AAWLKWGGVLAFANVRGGGEYGRAWHEAALKTRRQNAFDDFIAAARWLVSEGYTVPARLASRGNSNGGLLVAVTAMQAPA SFGAVFCRAPTLDMLRFPSFGYLSSATVEYGSPEDPVEGAYLAGYSPYHNVRAGLRYPRMAFVAALNDRTAPPHDPLKMV ARLQAEGTQGGPFLLLPLRDSGHGGGTTLTALIEQDVDELCFYCGALGVSPG
Sequences:
>Translated_692_residues MTPVDRTCKSPSARRDARSGYTLHGQRFDDPYAWMEQLDAPETQAWISEQEALTQSVLHALPGREALREAVTRSARHARR SPPIAAGPGGREFLWQAEARDDKLKLLLRRHEGAPLETLLDPNTWASNEVLVFAVPSPDGAFVAFGKAVGSAHGALIHVL EVSTGRLLPDRPRGTSHASVAWRPDASGFFYAANPDPGEVPTGEEAHWNAVYEHRLGSGAPARRVFGDDHEKEYWCTVKV SECGRFAVLAKWDYVHANVITLLRLADDARIPVATAMTSLNQVQVIGESLLIHTDLDAPRGRLCTAPLTAPTQWRTLIPE SEHTLQTVAGVGGRLYAVYSRAASHHVRIHAEDGTWLRDLKLPALGAVNRNEGEGIVSGVSGPWRGDEVWVNFMSYVQAP SVYRYDYDADLLTPYHVPDVGLDASEYVTEQVWYPSLDGTRVSMFLVHRKDLPRDGQWPVRLSGYGGFNISVEPRFTSLQ AAWLKWGGVLAFANVRGGGEYGRAWHEAALKTRRQNAFDDFIAAARWLVSEGYTVPARLASRGNSNGGLLVAVTAMQAPA SFGAVFCRAPTLDMLRFPSFGYLSSATVEYGSPEDPVEGAYLAGYSPYHNVRAGLRYPRMAFVAALNDRTAPPHDPLKMV ARLQAEGTQGGPFLLLPLRDSGHGGGTTLTALIEQDVDELCFYCGALGVSPG >Mature_691_residues TPVDRTCKSPSARRDARSGYTLHGQRFDDPYAWMEQLDAPETQAWISEQEALTQSVLHALPGREALREAVTRSARHARRS PPIAAGPGGREFLWQAEARDDKLKLLLRRHEGAPLETLLDPNTWASNEVLVFAVPSPDGAFVAFGKAVGSAHGALIHVLE VSTGRLLPDRPRGTSHASVAWRPDASGFFYAANPDPGEVPTGEEAHWNAVYEHRLGSGAPARRVFGDDHEKEYWCTVKVS ECGRFAVLAKWDYVHANVITLLRLADDARIPVATAMTSLNQVQVIGESLLIHTDLDAPRGRLCTAPLTAPTQWRTLIPES EHTLQTVAGVGGRLYAVYSRAASHHVRIHAEDGTWLRDLKLPALGAVNRNEGEGIVSGVSGPWRGDEVWVNFMSYVQAPS VYRYDYDADLLTPYHVPDVGLDASEYVTEQVWYPSLDGTRVSMFLVHRKDLPRDGQWPVRLSGYGGFNISVEPRFTSLQA AWLKWGGVLAFANVRGGGEYGRAWHEAALKTRRQNAFDDFIAAARWLVSEGYTVPARLASRGNSNGGLLVAVTAMQAPAS FGAVFCRAPTLDMLRFPSFGYLSSATVEYGSPEDPVEGAYLAGYSPYHNVRAGLRYPRMAFVAALNDRTAPPHDPLKMVA RLQAEGTQGGPFLLLPLRDSGHGGGTTLTALIEQDVDELCFYCGALGVSPG
Specific function: Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long. Has an absolute requirement for an X-Pro bond in the trans configuration immediately preceding the Pro-Y scissible bond [H]
COG id: COG1505
COG function: function code E; Serine proteases of the peptidase family S9A
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9A family [H]
Homologues:
Organism=Homo sapiens, GI41349456, Length=719, Percent_Identity=29.346314325452, Blast_Score=306, Evalue=3e-83, Organism=Homo sapiens, GI108860686, Length=201, Percent_Identity=28.3582089552239, Blast_Score=83, Evalue=7e-16, Organism=Homo sapiens, GI284172420, Length=201, Percent_Identity=28.3582089552239, Blast_Score=83, Evalue=8e-16, Organism=Homo sapiens, GI284172413, Length=201, Percent_Identity=28.3582089552239, Blast_Score=83, Evalue=8e-16, Organism=Homo sapiens, GI70778815, Length=201, Percent_Identity=28.3582089552239, Blast_Score=83, Evalue=8e-16, Organism=Homo sapiens, GI284172438, Length=201, Percent_Identity=28.3582089552239, Blast_Score=83, Evalue=9e-16, Organism=Homo sapiens, GI284172431, Length=201, Percent_Identity=28.3582089552239, Blast_Score=83, Evalue=9e-16, Organism=Homo sapiens, GI108860692, Length=199, Percent_Identity=28.1407035175879, Blast_Score=82, Evalue=1e-15, Organism=Escherichia coli, GI1788150, Length=694, Percent_Identity=24.207492795389, Blast_Score=158, Evalue=1e-39, Organism=Drosophila melanogaster, GI24583414, Length=723, Percent_Identity=29.3222683264177, Blast_Score=295, Evalue=6e-80, Organism=Drosophila melanogaster, GI221510989, Length=718, Percent_Identity=29.8050139275766, Blast_Score=294, Evalue=1e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002471 - InterPro: IPR001375 - InterPro: IPR002470 - InterPro: IPR004106 [H]
Pfam domain/function: PF00326 Peptidase_S9; PF02897 Peptidase_S9_N [H]
EC number: =3.4.21.26 [H]
Molecular weight: Translated: 75670; Mature: 75539
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: PS00708 PRO_ENDOPEP_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPVDRTCKSPSARRDARSGYTLHGQRFDDPYAWMEQLDAPETQAWISEQEALTQSVLHA CCCCCCCCCCCCHHHHCCCCCEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LPGREALREAVTRSARHARRSPPIAAGPGGREFLWQAEARDDKLKLLLRRHEGAPLETLL CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCHHHHC DPNTWASNEVLVFAVPSPDGAFVAFGKAVGSAHGALIHVLEVSTGRLLPDRPRGTSHASV CCCCCCCCCEEEEEECCCCCCEEEEHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCEE AWRPDASGFFYAANPDPGEVPTGEEAHWNAVYEHRLGSGAPARRVFGDDHEKEYWCTVKV EECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHCCCCCCCEEEEEEEE SECGRFAVLAKWDYVHANVITLLRLADDARIPVATAMTSLNQVQVIGESLLIHTDLDAPR CCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEECCEEEEEECCCCCC GRLCTAPLTAPTQWRTLIPESEHTLQTVAGVGGRLYAVYSRAASHHVRIHAEDGTWLRDL CCEEECCCCCCCCHHCCCCCCHHHHHHHHCCCCEEEEEEHHCCCCEEEEEECCCCEEEEE KLPALGAVNRNEGEGIVSGVSGPWRGDEVWVNFMSYVQAPSVYRYDYDADLLTPYHVPDV CCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC GLDASEYVTEQVWYPSLDGTRVSMFLVHRKDLPRDGQWPVRLSGYGGFNISVEPRFTSLQ CCCHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCEEEEECCCHHHHH AAWLKWGGVLAFANVRGGGEYGRAWHEAALKTRRQNAFDDFIAAARWLVSEGYTVPARLA HHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH SRGNSNGGLLVAVTAMQAPASFGAVFCRAPTLDMLRFPSFGYLSSATVEYGSPEDPVEGA HCCCCCCCEEEEEEEECCCCHHCEEEECCCCHHHHHCCCCCCCCCCEEECCCCCCCCCCC YLAGYSPYHNVRAGLRYPRMAFVAALNDRTAPPHDPLKMVARLQAEGTQGGPFLLLPLRD EEECCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECC SGHGGGTTLTALIEQDVDELCFYCGALGVSPG CCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCC >Mature Secondary Structure TPVDRTCKSPSARRDARSGYTLHGQRFDDPYAWMEQLDAPETQAWISEQEALTQSVLHA CCCCCCCCCCCHHHHCCCCCEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LPGREALREAVTRSARHARRSPPIAAGPGGREFLWQAEARDDKLKLLLRRHEGAPLETLL CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCCHHHHC DPNTWASNEVLVFAVPSPDGAFVAFGKAVGSAHGALIHVLEVSTGRLLPDRPRGTSHASV CCCCCCCCCEEEEEECCCCCCEEEEHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCEE AWRPDASGFFYAANPDPGEVPTGEEAHWNAVYEHRLGSGAPARRVFGDDHEKEYWCTVKV EECCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHCCCCCCCEEEEEEEE SECGRFAVLAKWDYVHANVITLLRLADDARIPVATAMTSLNQVQVIGESLLIHTDLDAPR CCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEECCEEEEEECCCCCC GRLCTAPLTAPTQWRTLIPESEHTLQTVAGVGGRLYAVYSRAASHHVRIHAEDGTWLRDL CCEEECCCCCCCCHHCCCCCCHHHHHHHHCCCCEEEEEEHHCCCCEEEEEECCCCEEEEE KLPALGAVNRNEGEGIVSGVSGPWRGDEVWVNFMSYVQAPSVYRYDYDADLLTPYHVPDV CCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCC GLDASEYVTEQVWYPSLDGTRVSMFLVHRKDLPRDGQWPVRLSGYGGFNISVEPRFTSLQ CCCHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEECCCCEEEEECCCHHHHH AAWLKWGGVLAFANVRGGGEYGRAWHEAALKTRRQNAFDDFIAAARWLVSEGYTVPARLA HHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH SRGNSNGGLLVAVTAMQAPASFGAVFCRAPTLDMLRFPSFGYLSSATVEYGSPEDPVEGA HCCCCCCCEEEEEEEECCCCHHCEEEECCCCHHHHHCCCCCCCCCCEEECCCCCCCCCCC YLAGYSPYHNVRAGLRYPRMAFVAALNDRTAPPHDPLKMVARLQAEGTQGGPFLLLPLRD EEECCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECC SGHGGGTTLTALIEQDVDELCFYCGALGVSPG CCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1840588; 7764331 [H]