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The map label for this gene is betI [C]

Identifier: 108761552

GI number: 108761552

Start: 88836

End: 89504

Strand: Reverse

Name: betI [C]

Synonym: MXAN_0079

Alternate gene names: 108761552

Gene position: 89504-88836 (Counterclockwise)

Preceding gene: 108761231

Following gene: 108762350

Centisome position: 0.98

GC content: 71.45

Gene sequence:

>669_bases
GTGCTTGCTTTTTTAACCCTTGGCTCGCATCCTGGCCGGGTGAGTGAGGCATCCGGTACGCCCGGCAGGCAGGAGCAGGA
GCGCAGCCGCGTCACGCGCCAGCGTCTGATGGAGGCGGCCATTGGCGCGCTCTCCGAGCTGGGGTGGGCGGGCGCGACCA
TGACTGTGATTGCCGAGCGCGCGGGTGTGTCCCGGGGCGCCTGTCAGCACCACTTCCCCACCCGCGCCGACCTGGTGGCC
GCCGCCGTGGAGTACGTGGGGCACCAGCAGGTGGAGGCCGTGCTCCGCAAGGCCGCCCAGTTGCCGGCCGATGCTCGCCG
CACGGAGGCCATCCTCCACATGCTGGCCGGCATCTACCTCAGCCCTGTCTTCACCGCCGCGGTGCAGCTCTGGGTGGCCG
CCGTGGCGGACGCGGAGCTGCGCGCGCAGTTGGCCCCGCTGGAGGCCCGCGTGGGGCGGGAGTTCCACCGGCTGACGGTG
CAGTTGCTCGGCGTGGATGACAGCGTCGCGGAGGTGCGCGAGCTGATTCAGGGCACGCTCGACCTCATCCGGGGACTCGC
GCTGGCCAATCTGCTGAGAGACGACAGCGCGCGCAGGAAGAAGGTCCTCCACCGCTGGGCGCTCACCCTGGACGAGGCCC
TGAGCGCCCGGCGCACCCGCAGAGGCTGA

Upstream 100 bases:

>100_bases
GAGGCATTGCCGACACGCAGGGGGGATGCAGGCATGAGCTCTCCACTCGGCAGCAACGAAAGACGCGTGAGTCTGGGCAG
GCGACTCTAAAAAAGCAAGC

Downstream 100 bases:

>100_bases
GGACCGCAGGTTTCATGAACGACCTCCACATCAGGAGCTGACCATGGGCTACCGCTCTCTCTTCGCACCGGGCTGTTTCA
GCAACCGCACCATCGTCGTC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MLAFLTLGSHPGRVSEASGTPGRQEQERSRVTRQRLMEAAIGALSELGWAGATMTVIAERAGVSRGACQHHFPTRADLVA
AAVEYVGHQQVEAVLRKAAQLPADARRTEAILHMLAGIYLSPVFTAAVQLWVAAVADAELRAQLAPLEARVGREFHRLTV
QLLGVDDSVAEVRELIQGTLDLIRGLALANLLRDDSARRKKVLHRWALTLDEALSARRTRRG

Sequences:

>Translated_222_residues
MLAFLTLGSHPGRVSEASGTPGRQEQERSRVTRQRLMEAAIGALSELGWAGATMTVIAERAGVSRGACQHHFPTRADLVA
AAVEYVGHQQVEAVLRKAAQLPADARRTEAILHMLAGIYLSPVFTAAVQLWVAAVADAELRAQLAPLEARVGREFHRLTV
QLLGVDDSVAEVRELIQGTLDLIRGLALANLLRDDSARRKKVLHRWALTLDEALSARRTRRG
>Mature_222_residues
MLAFLTLGSHPGRVSEASGTPGRQEQERSRVTRQRLMEAAIGALSELGWAGATMTVIAERAGVSRGACQHHFPTRADLVA
AAVEYVGHQQVEAVLRKAAQLPADARRTEAILHMLAGIYLSPVFTAAVQLWVAAVADAELRAQLAPLEARVGREFHRLTV
QLLGVDDSVAEVRELIQGTLDLIRGLALANLLRDDSARRKKVLHRWALTLDEALSARRTRRG

Specific function: Repressor Involved In Choline Regulation Of The Bet Genes. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 24188; Mature: 24188

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAFLTLGSHPGRVSEASGTPGRQEQERSRVTRQRLMEAAIGALSELGWAGATMTVIAER
CEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AGVSRGACQHHFPTRADLVAAAVEYVGHQQVEAVLRKAAQLPADARRTEAILHMLAGIYL
HCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SPVFTAAVQLWVAAVADAELRAQLAPLEARVGREFHRLTVQLLGVDDSVAEVRELIQGTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
DLIRGLALANLLRDDSARRKKVLHRWALTLDEALSARRTRRG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLAFLTLGSHPGRVSEASGTPGRQEQERSRVTRQRLMEAAIGALSELGWAGATMTVIAER
CEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
AGVSRGACQHHFPTRADLVAAAVEYVGHQQVEAVLRKAAQLPADARRTEAILHMLAGIYL
HCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
SPVFTAAVQLWVAAVADAELRAQLAPLEARVGREFHRLTVQLLGVDDSVAEVRELIQGTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
DLIRGLALANLLRDDSARRKKVLHRWALTLDEALSARRTRRG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]