| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108761490
Identifier: 108761490
GI number: 108761490
Start: 6225121
End: 6227781
Strand: Reverse
Name: 108761490
Synonym: MXAN_4979
Alternate gene names: NA
Gene position: 6227781-6225121 (Counterclockwise)
Preceding gene: 108761725
Following gene: 108760649
Centisome position: 68.14
GC content: 66.82
Gene sequence:
>2661_bases ATGCCGTCAAGAATTGCAGGTGGGCTTCTAGGGCTTGTGTTGCAACTGGCGCCGTGTGTGTTGGGAATGCCGATGGCGCT CGCCGCGTCGCCGCGCGTTTCCGGGGAGGTCACCCACGACCTTCCCGTGAGATTCGAAGACTGCAAGGGTCCGCCTCCGG CGGCGCGAACGACGACGCGTGCGGTGCGTGGGGATGAGCTGCCCGACTTCGTCATCACCGATGTTCGTGCGCCATCGCGC GTCTACGGGCGGGACCCCTTCGAGGTTGTCGTCACGGTCTGCAACATGGGCCGCCGCGCGGGGAGCGCGGACGTCGAGGT GTTCGTGTCCCGGGACGTGTGCATCGCCAAGGAGGACGCGTTGCTCGGGGCCGTTTCCTCGGGATGGGTGGGGGCCGGGA AGTGTGCGTCACGTTCAATCGTCGCCAACAAGGAGGCGTCCCAGTCGGGGATGTGGTTCATCGGGGCCTTGGTGGATCCG CACGCGCGTGTGGACGAGGTCTCGGAGGAGAACAACGCGCACGCTGGCGACTCCGTGACGTTCGACGCGCTTCCCGACTT CACCGTGGAGTCGGTGGCTGTGCCCTCGGTCGTTCGCCCGGAGTGGCCTTTTTATGTGGCTGCCCGTGTGTGCAACAGAG GCCAAGGGTCTGAGCAGGCGACGGTATATCTCTATCGGTCGTCCGACGCACATATCGACACCGACGACGTCGTCATGCGC GACCAGTCGTGGCTCTTTCTCGATGCCGGACGATGCGAACGCGTCGTGTTCGTCGGGGTGCTCGGCGAACCGGGCACTTC GTACCTCGCGTTCATGGTGGATCCGCTGAATGAGCGGCCCGAGGCTGACGAGACCAACAACCTCAGTGTCGTCAGTCCTC TCGAGGTGGGCTCGATTCCCGACTACGTCGTCGCGGCGCTGAGGGCGCCGGCCATGGAGTCGATCAACGGGAGCCTTCCT GTGCGCGCGACAGTGTGCAACCAGGGCACGGCTCCCGCGTCCGCCACGCAGGTGCAATTCCAGCTTCGTGCCAGTGAGCC CTCCGCTGAAGGCGTGTTGCGTGTCTCATCGCGGAACATCCCGGCCTTGGAGGCCAACCAGTGCATCGAGTGGGAGGAGT CGCTGGGCTCCATGGCGAACGCGGCGCGAAGCTGGCGGCTGGTGGCCACGGTGAATCCGGTTGGTGCGCAGACAGAGGCT CATTCGGGCAACAACGACAGGTCCGTGAACGTCCTGCTGGGCTCCTCGGCGGACCTCTCCGTCACACGCATCGAGCCGCT GACGCACGCGCTCGTTCCGGGGGCCTCCTTCACCACGGAAGTCACGGTCTGCAATACGGGAACGCTCTCCGCGTCGGCGC TGGCGGTTCATGTGGCGCTGTCGGATGGCCCGGACCCTCGGGCAGGCATTCGCGTGGGGACCCGGGCCTTTGGCGCGCTA GGCAAGGGTTGCGCGGTGCTTCCCGTGGTGGGGACGGTTCCCACGCAGGGGTTGCCCGCCACTGTCCATGTGAAGGCCTC GGTGGAGCTCGTTGCGCCTGTCGGGGGAGAGGCACACCTGGAGAACAATGCGCTGACAGGCCCCGTGGTGGGGCTGGGGA CCGGGCCTGACCTGGTCGTGACGCGGATCGTCGCCCAGGGGCGTGCGGCGTGGCCCGAAGGGAAGCTGCCTGTCTCGGTG ACGGTCTGTAATCAGGGCAATGTGCGGACGCCGCGAGCGGCCGTCCAGACGCTCTTCGTGCCGGAGGTGCTCCCGGAGAT CTCGGCGGGCATCCAGGGGGCGAAGCTGTCTGTCGAGTCGTTGGCGCCAGGGGCCTGCATCACGTTGGACGCGGAGGCGA GGGTGCCCTACTACACGGGGGCGTTTCGATTGGCGGCGAGAGCCGACATCGACAACGCCATCACGGAGTTGGTGGAGTCC AACAACGACGCCCTGGGGGACATCATCCAGGTGACCCAGCTCAGTGGATTGGTCGTCACGGACCTTCAAGCGCCGACGGC GATCAACACGAACGCCACCATCAATGCCACCGCGACGGTGTGCAACCGGAGCCCGGTGGCTCAGCCTGGCACTGCGGTCG GGCTCGCGCTGCGCACGGAGGATGACTTTCCCGTCTCCGCGCTCTCCGAGTATGTCGTGGTTCCGGCGCTCGTTCCGGGT GCGTGCGCACAGGCGACGCTGCGGGGCTGGTCCAACGTGCCGCAGGAGGGCGCCTACAGGCTGGTGGCTTATCTCGGAGA CCCATGGGACGTGTATGCCCCCGAGCAGTGGCGCGCCCTCTTGTTCTCCGTGCCCATCGCCGTGGGGGGCTGGAGCGACT TCGCCGTGACGGCCGTGAGTGCCCCGGTGGTCGTCCAAGCAGGTGACGCGTATTCGACGGAGGTCTCCGTCTGCAATCGA GGCTTTGGTCAGGCGTCGGCCTCCGTGAGGGCCTACTTGTCTCGTGACGAGCACCTGGACCCGGCGGTGGATGTGCGGGT CGGGCAGATGAGCGTGACGCTTGCCCGGGGGCAGTGCCGGACAGTGTCGGTGTCGTCGCGGGCCACCGTCAGCAGCGGGG ACGTCTGGTACGTGGCCGCGGACGTGAGTGTGGGTAGCCTCCCGGACCTGGTGTCCGCCAACGATGGTCAAGTGGGTGCT CGGATGGTCGTGACACCCTGA
Upstream 100 bases:
>100_bases TGCGTTCGTTCCGGTCAGGCCCGCATGTTAGATCACGTCCCGATGCCCCGGGTTGCTGCCGCCTGAACTCAAGGCCAGCC CCGGAGCATGAGGGGGAACG
Downstream 100 bases:
>100_bases GCCCGAGAGGGGGGCGCGGGCGAGTGGGCAGCGGACACGGTGGCTGTTATGACAGCCCCGTGTCCGACGTCACACCCCCC GCGTCACCTCCGTTTGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Peptidase S8 And; Fibronectin Type III Domain-Containing Protein; APHP Domain-Containing Protein; Peptidase S8 And S; Fibronectin Type III Domain Protein; YD Repeat-Containing Protein; Peptidase S8/S53 Subtilisin Kexin Sedolisin; Fibronectin Type III-Like Protein; Lipoprotein
Number of amino acids: Translated: 886; Mature: 885
Protein sequence:
>886_residues MPSRIAGGLLGLVLQLAPCVLGMPMALAASPRVSGEVTHDLPVRFEDCKGPPPAARTTTRAVRGDELPDFVITDVRAPSR VYGRDPFEVVVTVCNMGRRAGSADVEVFVSRDVCIAKEDALLGAVSSGWVGAGKCASRSIVANKEASQSGMWFIGALVDP HARVDEVSEENNAHAGDSVTFDALPDFTVESVAVPSVVRPEWPFYVAARVCNRGQGSEQATVYLYRSSDAHIDTDDVVMR DQSWLFLDAGRCERVVFVGVLGEPGTSYLAFMVDPLNERPEADETNNLSVVSPLEVGSIPDYVVAALRAPAMESINGSLP VRATVCNQGTAPASATQVQFQLRASEPSAEGVLRVSSRNIPALEANQCIEWEESLGSMANAARSWRLVATVNPVGAQTEA HSGNNDRSVNVLLGSSADLSVTRIEPLTHALVPGASFTTEVTVCNTGTLSASALAVHVALSDGPDPRAGIRVGTRAFGAL GKGCAVLPVVGTVPTQGLPATVHVKASVELVAPVGGEAHLENNALTGPVVGLGTGPDLVVTRIVAQGRAAWPEGKLPVSV TVCNQGNVRTPRAAVQTLFVPEVLPEISAGIQGAKLSVESLAPGACITLDAEARVPYYTGAFRLAARADIDNAITELVES NNDALGDIIQVTQLSGLVVTDLQAPTAINTNATINATATVCNRSPVAQPGTAVGLALRTEDDFPVSALSEYVVVPALVPG ACAQATLRGWSNVPQEGAYRLVAYLGDPWDVYAPEQWRALLFSVPIAVGGWSDFAVTAVSAPVVVQAGDAYSTEVSVCNR GFGQASASVRAYLSRDEHLDPAVDVRVGQMSVTLARGQCRTVSVSSRATVSSGDVWYVAADVSVGSLPDLVSANDGQVGA RMVVTP
Sequences:
>Translated_886_residues MPSRIAGGLLGLVLQLAPCVLGMPMALAASPRVSGEVTHDLPVRFEDCKGPPPAARTTTRAVRGDELPDFVITDVRAPSR VYGRDPFEVVVTVCNMGRRAGSADVEVFVSRDVCIAKEDALLGAVSSGWVGAGKCASRSIVANKEASQSGMWFIGALVDP HARVDEVSEENNAHAGDSVTFDALPDFTVESVAVPSVVRPEWPFYVAARVCNRGQGSEQATVYLYRSSDAHIDTDDVVMR DQSWLFLDAGRCERVVFVGVLGEPGTSYLAFMVDPLNERPEADETNNLSVVSPLEVGSIPDYVVAALRAPAMESINGSLP VRATVCNQGTAPASATQVQFQLRASEPSAEGVLRVSSRNIPALEANQCIEWEESLGSMANAARSWRLVATVNPVGAQTEA HSGNNDRSVNVLLGSSADLSVTRIEPLTHALVPGASFTTEVTVCNTGTLSASALAVHVALSDGPDPRAGIRVGTRAFGAL GKGCAVLPVVGTVPTQGLPATVHVKASVELVAPVGGEAHLENNALTGPVVGLGTGPDLVVTRIVAQGRAAWPEGKLPVSV TVCNQGNVRTPRAAVQTLFVPEVLPEISAGIQGAKLSVESLAPGACITLDAEARVPYYTGAFRLAARADIDNAITELVES NNDALGDIIQVTQLSGLVVTDLQAPTAINTNATINATATVCNRSPVAQPGTAVGLALRTEDDFPVSALSEYVVVPALVPG ACAQATLRGWSNVPQEGAYRLVAYLGDPWDVYAPEQWRALLFSVPIAVGGWSDFAVTAVSAPVVVQAGDAYSTEVSVCNR GFGQASASVRAYLSRDEHLDPAVDVRVGQMSVTLARGQCRTVSVSSRATVSSGDVWYVAADVSVGSLPDLVSANDGQVGA RMVVTP >Mature_885_residues PSRIAGGLLGLVLQLAPCVLGMPMALAASPRVSGEVTHDLPVRFEDCKGPPPAARTTTRAVRGDELPDFVITDVRAPSRV YGRDPFEVVVTVCNMGRRAGSADVEVFVSRDVCIAKEDALLGAVSSGWVGAGKCASRSIVANKEASQSGMWFIGALVDPH ARVDEVSEENNAHAGDSVTFDALPDFTVESVAVPSVVRPEWPFYVAARVCNRGQGSEQATVYLYRSSDAHIDTDDVVMRD QSWLFLDAGRCERVVFVGVLGEPGTSYLAFMVDPLNERPEADETNNLSVVSPLEVGSIPDYVVAALRAPAMESINGSLPV RATVCNQGTAPASATQVQFQLRASEPSAEGVLRVSSRNIPALEANQCIEWEESLGSMANAARSWRLVATVNPVGAQTEAH SGNNDRSVNVLLGSSADLSVTRIEPLTHALVPGASFTTEVTVCNTGTLSASALAVHVALSDGPDPRAGIRVGTRAFGALG KGCAVLPVVGTVPTQGLPATVHVKASVELVAPVGGEAHLENNALTGPVVGLGTGPDLVVTRIVAQGRAAWPEGKLPVSVT VCNQGNVRTPRAAVQTLFVPEVLPEISAGIQGAKLSVESLAPGACITLDAEARVPYYTGAFRLAARADIDNAITELVESN NDALGDIIQVTQLSGLVVTDLQAPTAINTNATINATATVCNRSPVAQPGTAVGLALRTEDDFPVSALSEYVVVPALVPGA CAQATLRGWSNVPQEGAYRLVAYLGDPWDVYAPEQWRALLFSVPIAVGGWSDFAVTAVSAPVVVQAGDAYSTEVSVCNRG FGQASASVRAYLSRDEHLDPAVDVRVGQMSVTLARGQCRTVSVSSRATVSSGDVWYVAADVSVGSLPDLVSANDGQVGAR MVVTP
Specific function: Unknown
COG id: COG1572
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92459; Mature: 92328
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSRIAGGLLGLVLQLAPCVLGMPMALAASPRVSGEVTHDLPVRFEDCKGPPPAARTTTR CCCHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCEECCCCCEECCCCCCCCCCCHHHH AVRGDELPDFVITDVRAPSRVYGRDPFEVVVTVCNMGRRAGSADVEVFVSRDVCIAKEDA HHCCCCCCCEEEECCCCCCHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEECCC LLGAVSSGWVGAGKCASRSIVANKEASQSGMWFIGALVDPHARVDEVSEENNAHAGDSVT EEEECCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCEE FDALPDFTVESVAVPSVVRPEWPFYVAARVCNRGQGSEQATVYLYRSSDAHIDTDDVVMR ECCCCCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCEEEE DQSWLFLDAGRCERVVFVGVLGEPGTSYLAFMVDPLNERPEADETNNLSVVSPLEVGSIP CCCEEEEECCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCH DYVVAALRAPAMESINGSLPVRATVCNQGTAPASATQVQFQLRASEPSAEGVLRVSSRNI HHHHHHHHCCCHHHCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCC PALEANQCIEWEESLGSMANAARSWRLVATVNPVGAQTEAHSGNNDRSVNVLLGSSADLS CCCCCCCCHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCEE VTRIEPLTHALVPGASFTTEVTVCNTGTLSASALAVHVALSDGPDPRAGIRVGTRAFGAL EEEECHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCEEECHHHHHHC GKGCAVLPVVGTVPTQGLPATVHVKASVELVAPVGGEAHLENNALTGPVVGLGTGPDLVV CCCCEEEEEEECCCCCCCCEEEEEEEEEEEEECCCCCEEECCCCCCCCEEEECCCHHHHH TRIVAQGRAAWPEGKLPVSVTVCNQGNVRTPRAAVQTLFVPEVLPEISAGIQGAKLSVES HHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHH LAPGACITLDAEARVPYYTGAFRLAARADIDNAITELVESNNDALGDIIQVTQLSGLVVT CCCCEEEEEECCCCCCEEECCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEE DLQAPTAINTNATINATATVCNRSPVAQPGTAVGLALRTEDDFPVSALSEYVVVPALVPG ECCCCCEECCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHEEEEECCCC ACAQATLRGWSNVPQEGAYRLVAYLGDPWDVYAPEQWRALLFSVPIAVGGWSDFAVTAVS HHHHHHHHHCCCCCCHHCEEEEEEECCCCCCCCCHHHHEEEEECCEEECCCCCEEEEEEC APVVVQAGDAYSTEVSVCNRGFGQASASVRAYLSRDEHLDPAVDVRVGQMSVTLARGQCR CCEEEECCCCCCCCHHHHHCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCCEE TVSVSSRATVSSGDVWYVAADVSVGSLPDLVSANDGQVGARMVVTP EEEECCCCEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECC >Mature Secondary Structure PSRIAGGLLGLVLQLAPCVLGMPMALAASPRVSGEVTHDLPVRFEDCKGPPPAARTTTR CCHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCEECCCCCEECCCCCCCCCCCHHHH AVRGDELPDFVITDVRAPSRVYGRDPFEVVVTVCNMGRRAGSADVEVFVSRDVCIAKEDA HHCCCCCCCEEEECCCCCCHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEECCC LLGAVSSGWVGAGKCASRSIVANKEASQSGMWFIGALVDPHARVDEVSEENNAHAGDSVT EEEECCCCCCCCCCCCCCCEEECCCCCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCEE FDALPDFTVESVAVPSVVRPEWPFYVAARVCNRGQGSEQATVYLYRSSDAHIDTDDVVMR ECCCCCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCEEEE DQSWLFLDAGRCERVVFVGVLGEPGTSYLAFMVDPLNERPEADETNNLSVVSPLEVGSIP CCCEEEEECCCCCEEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCH DYVVAALRAPAMESINGSLPVRATVCNQGTAPASATQVQFQLRASEPSAEGVLRVSSRNI HHHHHHHHCCCHHHCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCC PALEANQCIEWEESLGSMANAARSWRLVATVNPVGAQTEAHSGNNDRSVNVLLGSSADLS CCCCCCCCHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCEE VTRIEPLTHALVPGASFTTEVTVCNTGTLSASALAVHVALSDGPDPRAGIRVGTRAFGAL EEEECHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCEEECHHHHHHC GKGCAVLPVVGTVPTQGLPATVHVKASVELVAPVGGEAHLENNALTGPVVGLGTGPDLVV CCCCEEEEEEECCCCCCCCEEEEEEEEEEEEECCCCCEEECCCCCCCCEEEECCCHHHHH TRIVAQGRAAWPEGKLPVSVTVCNQGNVRTPRAAVQTLFVPEVLPEISAGIQGAKLSVES HHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEHHH LAPGACITLDAEARVPYYTGAFRLAARADIDNAITELVESNNDALGDIIQVTQLSGLVVT CCCCEEEEEECCCCCCEEECCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEE DLQAPTAINTNATINATATVCNRSPVAQPGTAVGLALRTEDDFPVSALSEYVVVPALVPG ECCCCCEECCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHEEEEECCCC ACAQATLRGWSNVPQEGAYRLVAYLGDPWDVYAPEQWRALLFSVPIAVGGWSDFAVTAVS HHHHHHHHHCCCCCCHHCEEEEEEECCCCCCCCCHHHHEEEEECCEEECCCCCEEEEEEC APVVVQAGDAYSTEVSVCNRGFGQASASVRAYLSRDEHLDPAVDVRVGQMSVTLARGQCR CCEEEECCCCCCCCHHHHHCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEEEEEECCCEE TVSVSSRATVSSGDVWYVAADVSVGSLPDLVSANDGQVGARMVVTP EEEECCCCEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA