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The map label for this gene is yebC [C]

Identifier: 108761477

GI number: 108761477

Start: 6220501

End: 6221250

Strand: Reverse

Name: yebC [C]

Synonym: MXAN_4974

Alternate gene names: 108761477

Gene position: 6221250-6220501 (Counterclockwise)

Preceding gene: 108762683

Following gene: 108757135

Centisome position: 68.07

GC content: 66.53

Gene sequence:

>750_bases
ATGTCCGGTCACAATCGGTGGTCGAAGATCAAGCGCCAGAAGGCCGCGATGGGCGCGACCAAGGGGAAGCTGTACTCCAA
GGTCGTCAAGGAAATCACCGTCGCGTCGCGGCTCGGTGGCGGTGAGCCCTCCGGCAATGCCCGCCTACGCGTCGCGCTGG
CCGCGGCCCGCGAGGCCAACATCCCGAAGGACACCATCGAGCGCGCCATCAAGAAGGGCACGGGCGAACTGGAGGGAGAG
AACTACGAGGAGGTGACGTACGAGGGCTACGGCCCCGGCGGTGTCGCCATCCTGGTGGAATGCCTCACCGACAACCGCAA
CCGGACCGCGGCCGACATGCGCTCCACCTTCAGCGCGTACGGGGGCAACCTGGGCGCCGAGGGCGCGGTGGCCTGGATGT
TCCAGAAGAAGGGCGTCATCAGCGTGAAGTACGGCCCCTCCGAGGACCAACTGATGGAGCAGGCCATCGACGCGGGCGCC
GAGGACGTCATCATGCTGGGGGACGAAGGCTCCGAGGTGCGCACCGCGGCGGCGGACCTGCACACGGTGGCGGGACGGCT
CCAGGAGTCGGGCCTGCCGCTGGGGCAGCAGCGGTGGGTGTTCCTCCCCCAGAACACCGTCGCACTGGACGTGGACACGG
TGAAGAAGCTCCTGAAGCTGCTGGACGCGCTCGAGGAGAACGACGACGTGCAGAACGTGCACGGGAACTACGAAATCGAA
GACGCGATGCTGGATTCGTTGTTGCAGTAG

Upstream 100 bases:

>100_bases
ACGCAGGCGTTTGAAGGGTTTGACTCGGCGGCCCTCGGTAGGGGACAAGGCCCGGCGCGGGGTGCTCCATCCGCTGGGCG
CCCGTTGAGGCACACCCACC

Downstream 100 bases:

>100_bases
CGGAGTCCTGGAACGGAGTGGAACGTGCGCGTGCTTGGCGTTGACCCGGGAAGCCGGTTCATGGGCTTCGGGGTGGTGGA
GGAGAAGCGGGGCCGGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MSGHNRWSKIKRQKAAMGATKGKLYSKVVKEITVASRLGGGEPSGNARLRVALAAAREANIPKDTIERAIKKGTGELEGE
NYEEVTYEGYGPGGVAILVECLTDNRNRTAADMRSTFSAYGGNLGAEGAVAWMFQKKGVISVKYGPSEDQLMEQAIDAGA
EDVIMLGDEGSEVRTAAADLHTVAGRLQESGLPLGQQRWVFLPQNTVALDVDTVKKLLKLLDALEENDDVQNVHGNYEIE
DAMLDSLLQ

Sequences:

>Translated_249_residues
MSGHNRWSKIKRQKAAMGATKGKLYSKVVKEITVASRLGGGEPSGNARLRVALAAAREANIPKDTIERAIKKGTGELEGE
NYEEVTYEGYGPGGVAILVECLTDNRNRTAADMRSTFSAYGGNLGAEGAVAWMFQKKGVISVKYGPSEDQLMEQAIDAGA
EDVIMLGDEGSEVRTAAADLHTVAGRLQESGLPLGQQRWVFLPQNTVALDVDTVKKLLKLLDALEENDDVQNVHGNYEIE
DAMLDSLLQ
>Mature_248_residues
SGHNRWSKIKRQKAAMGATKGKLYSKVVKEITVASRLGGGEPSGNARLRVALAAAREANIPKDTIERAIKKGTGELEGEN
YEEVTYEGYGPGGVAILVECLTDNRNRTAADMRSTFSAYGGNLGAEGAVAWMFQKKGVISVKYGPSEDQLMEQAIDAGAE
DVIMLGDEGSEVRTAAADLHTVAGRLQESGLPLGQQRWVFLPQNTVALDVDTVKKLLKLLDALEENDDVQNVHGNYEIED
AMLDSLLQ

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=249, Percent_Identity=33.7349397590361, Blast_Score=119, Evalue=3e-27,
Organism=Escherichia coli, GI1788171, Length=247, Percent_Identity=44.9392712550607, Blast_Score=230, Evalue=8e-62,
Organism=Escherichia coli, GI1788294, Length=233, Percent_Identity=34.7639484978541, Blast_Score=132, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI17556100, Length=243, Percent_Identity=24.2798353909465, Blast_Score=73, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=33.0798479087452, Blast_Score=120, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24583305, Length=251, Percent_Identity=22.7091633466135, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4974_MYXXD (Q1D2J3)

Other databases:

- EMBL:   CP000113
- RefSeq:   YP_633130.1
- ProteinModelPortal:   Q1D2J3
- SMR:   Q1D2J3
- STRING:   Q1D2J3
- GeneID:   4101379
- GenomeReviews:   CP000113_GR
- KEGG:   mxa:MXAN_4974
- TIGR:   MXAN_4974
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- PhylomeDB:   Q1D2J3
- ProtClustDB:   PRK00110
- BioCyc:   MXAN246197:MXAN_4974-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26881; Mature: 26749

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHNRWSKIKRQKAAMGATKGKLYSKVVKEITVASRLGGGEPSGNARLRVALAAAREAN
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEHHHCC
IPKDTIERAIKKGTGELEGENYEEVTYEGYGPGGVAILVECLTDNRNRTAADMRSTFSAY
CCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
GGNLGAEGAVAWMFQKKGVISVKYGPSEDQLMEQAIDAGAEDVIMLGDEGSEVRTAAADL
CCCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHH
HTVAGRLQESGLPLGQQRWVFLPQNTVALDVDTVKKLLKLLDALEENDDVQNVHGNYEIE
HHHHHHHHHCCCCCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHCCCCCCHHCCCCEEHH
DAMLDSLLQ
HHHHHHHCC
>Mature Secondary Structure 
SGHNRWSKIKRQKAAMGATKGKLYSKVVKEITVASRLGGGEPSGNARLRVALAAAREAN
CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEHHHCC
IPKDTIERAIKKGTGELEGENYEEVTYEGYGPGGVAILVECLTDNRNRTAADMRSTFSAY
CCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
GGNLGAEGAVAWMFQKKGVISVKYGPSEDQLMEQAIDAGAEDVIMLGDEGSEVRTAAADL
CCCCCCCCCEEEEEECCCEEEEEECCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHH
HTVAGRLQESGLPLGQQRWVFLPQNTVALDVDTVKKLLKLLDALEENDDVQNVHGNYEIE
HHHHHHHHHCCCCCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHCCCCCCHHCCCCEEHH
DAMLDSLLQ
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA