| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108761364
Identifier: 108761364
GI number: 108761364
Start: 4697772
End: 4699181
Strand: Reverse
Name: 108761364
Synonym: MXAN_3905
Alternate gene names: NA
Gene position: 4699181-4697772 (Counterclockwise)
Preceding gene: 108761017
Following gene: 108758724
Centisome position: 51.41
GC content: 72.06
Gene sequence:
>1410_bases ATGCATAGACCCCGTCACGCCATCACCGTGCCTCTCTGCGCCTGGCTCGCCCTGACCGCGTCCAGTGCTTCGGGGCAGCA GCCCGCGACCGAGGGGGGCGCACCCGCCGCCTCCGAATCCACGAAGGGTGCCCCAGCAAGTCCTCCGCCCGCGGAATCAC TGTCCACGGAAGGTGGTCCGCTGACGCTGGAACAGGCGGTGCAGCTTGCCGCGAAGCGTAACGAGGTGGCGCTGGCCGCC GAGCAGCAGTCCGAGGCCGCCCGGGCCCGGCTGGCTCGGGCCCGGGCCTTCTTCTTTCCAGAGCTGACGGGAACGGGCAC CTACACCCGGCGTCTGAATGAAGTGACGCGCGAAGTGGGTGGCCAGACAGTGGTCATCCAGCGCAACAACGCCTTCAACG CCAACTTCGTCGCCTCCCTGCCGCTGTTCGACGCGCGCGGCATCTTCCTGTACCGCGCGGCGCGGAGGGACGGCGATGCG GCGGAGCTGGAGGCCGTGGAGGCGCGCCGGCAGATTGGCTTCGAGGCCGCCAACGCCTTCCTCGCCACCCTGGCCCAGGA GCAGGTGTACCGCGCCGCCGAGCAGCGCCTCGCGTTCGCCCGCCAGTCACTTCAGGACGCATCGGCCCGCGCCAAGGCGG GTCTGGCCAGCAGCAACGATGTGACGCGCGCGGAGCTGGAGGCGGCCAGCGCCGAGGTGCAGATGTCCAACGCGCGCAAC GCCGCGCAGACCACGCGCCTGGAGCTGGGCTTCCTGCTGGTGTCTTCGGTGAAGGGCACCCTGGCCTCGCCGGACGTGCT GCTGTCGGACGCCAGCCGGCCGCTGCAGGCCCACGCCTCCCTGGCGGATGGGGCCCTGGACCGCCGGCCGGACATCCTGG CCGCGCGGCTGCGGGTGGATGCGCTGGAGGAGAGCGCCAAGGAGCCGCTCGCCCGGCTGCTCCCCACGCTGGGCGCGTCC GCCACCTACCGCCTCACGAACGAGGCCGGACTCGCGGGCCGCACGGGTGACGGCTTCCTGGGCGTCAACCTCATCTGGAA CTTCTTCGACGGCGGCGAGCGCTATGCCGAGCGCCGTGAGCGCGTGGCCCTGGCGCGGGCGGCGGAGCTCCAGGTCCAGG CCACCACGCGCCGGGTGGACGTGGACATCGAGCAAGCGAGGGTGGCGCTGGAGAATGCCCAGGCCGCCCTGGCACAGAGC GACCTGGCGGTCCGCACGGCCCGGCAGAACGCGGAGGAGCAGGGGATTCTCTACCGTCAGGGCCTGTCCACGGCGCTGAC GGTGGCGGACGCCTCGCTGCGGCAGTTCGAGGCGGAGGTGGCGTATGCCCAGAGCCGGTTCGCGCTGGGCGTGGCGCTGC TGGGGCTGCGGGCGGCAGTCGGACTCGACCCATTGGGGAAGGAACCGTGA
Upstream 100 bases:
>100_bases CGCAGGCCAGCGTCCAGACGCCGAATCGTCATAGCCCCTTCTCTCCACCTCCGTTTATATGGCGCGCCCCCCCCGACGCC TGAGCCATCCCCGCCTGTTC
Downstream 100 bases:
>100_bases AGGACATGCGACGCGCAGGAACGTTGGGTCTGGCCGTGGCCGCGCTGGCCCTGGCGGCTGGCTGCAAGAAGGACGCGCAA AGCGCCCAAGGCGGAGCAGC
Product: efflux transporter, outer membrane efflux protein
Products: NA
Alternate protein names: Outer Membrane Efflux Protein Domain-Containing Protein; Efflux Transporter Outer Membrane Efflux Protein; Outer Membrane Efflux Protein Domain Protein
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MHRPRHAITVPLCAWLALTASSASGQQPATEGGAPAASESTKGAPASPPPAESLSTEGGPLTLEQAVQLAAKRNEVALAA EQQSEAARARLARARAFFFPELTGTGTYTRRLNEVTREVGGQTVVIQRNNAFNANFVASLPLFDARGIFLYRAARRDGDA AELEAVEARRQIGFEAANAFLATLAQEQVYRAAEQRLAFARQSLQDASARAKAGLASSNDVTRAELEAASAEVQMSNARN AAQTTRLELGFLLVSSVKGTLASPDVLLSDASRPLQAHASLADGALDRRPDILAARLRVDALEESAKEPLARLLPTLGAS ATYRLTNEAGLAGRTGDGFLGVNLIWNFFDGGERYAERRERVALARAAELQVQATTRRVDVDIEQARVALENAQAALAQS DLAVRTARQNAEEQGILYRQGLSTALTVADASLRQFEAEVAYAQSRFALGVALLGLRAAVGLDPLGKEP
Sequences:
>Translated_469_residues MHRPRHAITVPLCAWLALTASSASGQQPATEGGAPAASESTKGAPASPPPAESLSTEGGPLTLEQAVQLAAKRNEVALAA EQQSEAARARLARARAFFFPELTGTGTYTRRLNEVTREVGGQTVVIQRNNAFNANFVASLPLFDARGIFLYRAARRDGDA AELEAVEARRQIGFEAANAFLATLAQEQVYRAAEQRLAFARQSLQDASARAKAGLASSNDVTRAELEAASAEVQMSNARN AAQTTRLELGFLLVSSVKGTLASPDVLLSDASRPLQAHASLADGALDRRPDILAARLRVDALEESAKEPLARLLPTLGAS ATYRLTNEAGLAGRTGDGFLGVNLIWNFFDGGERYAERRERVALARAAELQVQATTRRVDVDIEQARVALENAQAALAQS DLAVRTARQNAEEQGILYRQGLSTALTVADASLRQFEAEVAYAQSRFALGVALLGLRAAVGLDPLGKEP >Mature_469_residues MHRPRHAITVPLCAWLALTASSASGQQPATEGGAPAASESTKGAPASPPPAESLSTEGGPLTLEQAVQLAAKRNEVALAA EQQSEAARARLARARAFFFPELTGTGTYTRRLNEVTREVGGQTVVIQRNNAFNANFVASLPLFDARGIFLYRAARRDGDA AELEAVEARRQIGFEAANAFLATLAQEQVYRAAEQRLAFARQSLQDASARAKAGLASSNDVTRAELEAASAEVQMSNARN AAQTTRLELGFLLVSSVKGTLASPDVLLSDASRPLQAHASLADGALDRRPDILAARLRVDALEESAKEPLARLLPTLGAS ATYRLTNEAGLAGRTGDGFLGVNLIWNFFDGGERYAERRERVALARAAELQVQATTRRVDVDIEQARVALENAQAALAQS DLAVRTARQNAEEQGILYRQGLSTALTVADASLRQFEAEVAYAQSRFALGVALLGLRAAVGLDPLGKEP
Specific function: Unknown
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49877; Mature: 49877
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRPRHAITVPLCAWLALTASSASGQQPATEGGAPAASESTKGAPASPPPAESLSTEGGP CCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC LTLEQAVQLAAKRNEVALAAEQQSEAARARLARARAFFFPELTGTGTYTRRLNEVTREVG EEHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC GQTVVIQRNNAFNANFVASLPLFDARGIFLYRAARRDGDAAELEAVEARRQIGFEAANAF CCEEEEECCCCCCCCEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHH LATLAQEQVYRAAEQRLAFARQSLQDASARAKAGLASSNDVTRAELEAASAEVQMSNARN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEHHCCCC AAQTTRLELGFLLVSSVKGTLASPDVLLSDASRPLQAHASLADGALDRRPDILAARLRVD HHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH ALEESAKEPLARLLPTLGASATYRLTNEAGLAGRTGDGFLGVNLIWNFFDGGERYAERRE HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEHHHHEEHHCCHHHHHHHHH RVALARAAELQVQATTRRVDVDIEQARVALENAQAALAQSDLAVRTARQNAEEQGILYRQ HHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHH GLSTALTVADASLRQFEAEVAYAQSRFALGVALLGLRAAVGLDPLGKEP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MHRPRHAITVPLCAWLALTASSASGQQPATEGGAPAASESTKGAPASPPPAESLSTEGGP CCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC LTLEQAVQLAAKRNEVALAAEQQSEAARARLARARAFFFPELTGTGTYTRRLNEVTREVG EEHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC GQTVVIQRNNAFNANFVASLPLFDARGIFLYRAARRDGDAAELEAVEARRQIGFEAANAF CCEEEEECCCCCCCCEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCHHHHHHH LATLAQEQVYRAAEQRLAFARQSLQDASARAKAGLASSNDVTRAELEAASAEVQMSNARN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEHHCCCC AAQTTRLELGFLLVSSVKGTLASPDVLLSDASRPLQAHASLADGALDRRPDILAARLRVD HHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHH ALEESAKEPLARLLPTLGASATYRLTNEAGLAGRTGDGFLGVNLIWNFFDGGERYAERRE HHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEHHHHEEHHCCHHHHHHHHH RVALARAAELQVQATTRRVDVDIEQARVALENAQAALAQSDLAVRTARQNAEEQGILYRQ HHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHH GLSTALTVADASLRQFEAEVAYAQSRFALGVALLGLRAAVGLDPLGKEP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA