| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is panC
Identifier: 108761160
GI number: 108761160
Start: 2387815
End: 2388693
Strand: Direct
Name: panC
Synonym: MXAN_2056
Alternate gene names: 108761160
Gene position: 2387815-2388693 (Clockwise)
Preceding gene: 108756848
Following gene: 108763344
Centisome position: 26.13
GC content: 70.76
Gene sequence:
>879_bases ATGGCTCCCGCCGTCCTGAAAACCGTTGCGGACGTGAAGGACTGGACGGCGGGGCTGCGCCGGGAGGGGCACCGGCTCGC GCTGGTGCCCACCATGGGCTTCCTGCATGAAGGTCACCTCTCGCTCATTCGCGAGGGGCGGCGCCGCGCGGACGTGGTGG CCGTGTCCATCTTCGTGAACCCCACGCAGTTCGGGCCGAAGGAGGACTTGTCCCGCTACCCCCGCGACTTCGAGGGTGAC GTCGCCAAGTGCATCAGCGCGGGCGCGCAGGCCATCTTCGCGCCCGCGGGCCCGGAGGTGATGTACCCGCAGGGCTACCA GACGTACGTGGAGGTGACGGACGTCAGCCAGGGCCTGTGCGGGGCCCGGCGTCCGGGGCACTTCCGCGGGGTGGCCACCG TCGTCACGAAGCTGCTGACGCTGTTCCGCCCGGAGGTGGCGCTCTTCGGGGAGAAGGACTACCAGCAGCTCCAGGTCATC CGGGCGCTCAACCAGGACCTGCACCTGGGCGCGGACATCGTCGGCATGCCGACGGTGCGCGAGCCGGACGGCCTGGCGAT GAGCAGCCGCAATGCCTACTTGTCCCCCGAGGAGCGGCAGCGGGCGCTGGCCCTGTCCCGGGGGCTCAAGGCCGCCCAGG CGCTGCTGCGCGAGGGCACGCGGGAGTCGGAGCCCCTGGTGGCGGCCGTCCGGCGCGAATTGGAGGCGGCGGGGCTTCGG GAAGACTACGTGGAACTGGTGGATGCGGAACGGCTGACGCCTCTGGCTTCGGTGGCGCCCGGGCAGCCTGCCCGGTTGCT CGTCGCGGCCTTCAGTGGCACGACGCGCCTCATCGACAACATGCAGTTGGGTGGTGAGGAGAACGCGGGACGCGTATGA
Upstream 100 bases:
>100_bases TGGCGCCGGGGGCTCCGGCTCCGGCGGCCCGGGTGGAGCCGTCCGCGCCCGCCGAGGCTGGCGAGAAGCTGGGCCCCGTC TACGGGAGACCCGCCTAGTC
Downstream 100 bases:
>100_bases CATCCGGAGGGAAGTCAAAGGGAGTGGGCAGTGAGCCCGGCGTGAGAGTCATCGCGGAAAACCGTCGTGCGCGTTTCGAC TACACGGTCGACGAAAAGGT
Product: pantoate--beta-alanine ligase
Products: NA
Alternate protein names: PS; Pantoate--beta-alanine ligase; Pantoate-activating enzyme
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MAPAVLKTVADVKDWTAGLRREGHRLALVPTMGFLHEGHLSLIREGRRRADVVAVSIFVNPTQFGPKEDLSRYPRDFEGD VAKCISAGAQAIFAPAGPEVMYPQGYQTYVEVTDVSQGLCGARRPGHFRGVATVVTKLLTLFRPEVALFGEKDYQQLQVI RALNQDLHLGADIVGMPTVREPDGLAMSSRNAYLSPEERQRALALSRGLKAAQALLREGTRESEPLVAAVRRELEAAGLR EDYVELVDAERLTPLASVAPGQPARLLVAAFSGTTRLIDNMQLGGEENAGRV
Sequences:
>Translated_292_residues MAPAVLKTVADVKDWTAGLRREGHRLALVPTMGFLHEGHLSLIREGRRRADVVAVSIFVNPTQFGPKEDLSRYPRDFEGD VAKCISAGAQAIFAPAGPEVMYPQGYQTYVEVTDVSQGLCGARRPGHFRGVATVVTKLLTLFRPEVALFGEKDYQQLQVI RALNQDLHLGADIVGMPTVREPDGLAMSSRNAYLSPEERQRALALSRGLKAAQALLREGTRESEPLVAAVRRELEAAGLR EDYVELVDAERLTPLASVAPGQPARLLVAAFSGTTRLIDNMQLGGEENAGRV >Mature_291_residues APAVLKTVADVKDWTAGLRREGHRLALVPTMGFLHEGHLSLIREGRRRADVVAVSIFVNPTQFGPKEDLSRYPRDFEGDV AKCISAGAQAIFAPAGPEVMYPQGYQTYVEVTDVSQGLCGARRPGHFRGVATVVTKLLTLFRPEVALFGEKDYQQLQVIR ALNQDLHLGADIVGMPTVREPDGLAMSSRNAYLSPEERQRALALSRGLKAAQALLREGTRESEPLVAAVRRELEAAGLRE DYVELVDAERLTPLASVAPGQPARLLVAAFSGTTRLIDNMQLGGEENAGRV
Specific function: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
COG id: COG0414
COG function: function code H; Panthothenate synthetase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pantothenate synthetase family
Homologues:
Organism=Escherichia coli, GI1786325, Length=278, Percent_Identity=44.9640287769784, Blast_Score=236, Evalue=2e-63, Organism=Saccharomyces cerevisiae, GI6322046, Length=306, Percent_Identity=37.9084967320261, Blast_Score=182, Evalue=5e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PANC_MYXXD (Q1DAN8)
Other databases:
- EMBL: CP000113 - RefSeq: YP_630285.1 - ProteinModelPortal: Q1DAN8 - SMR: Q1DAN8 - STRING: Q1DAN8 - GeneID: 4102344 - GenomeReviews: CP000113_GR - KEGG: mxa:MXAN_2056 - TIGR: MXAN_2056 - eggNOG: COG0414 - HOGENOM: HBG428839 - OMA: RLIDNFT - PhylomeDB: Q1DAN8 - ProtClustDB: PRK00380 - BioCyc: MXAN246197:MXAN_2056-MONOMER - GO: GO:0005737 - HAMAP: MF_00158 - InterPro: IPR004821 - InterPro: IPR003721 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR21299:SF1 - TIGRFAMs: TIGR00125 - TIGRFAMs: TIGR00018
Pfam domain/function: PF02569 Pantoate_ligase
EC number: =6.3.2.1
Molecular weight: Translated: 31779; Mature: 31648
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: ACT_SITE 39-39 BINDING 63-63 BINDING 63-63 BINDING 156-156 BINDING 179-179
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPAVLKTVADVKDWTAGLRREGHRLALVPTMGFLHEGHLSLIREGRRRADVVAVSIFVN CCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCHHHCEEEEEEEEC PTQFGPKEDLSRYPRDFEGDVAKCISAGAQAIFAPAGPEVMYPQGYQTYVEVTDVSQGLC CCCCCCHHHHHHCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEEEHHHCCCC GARRPGHFRGVATVVTKLLTLFRPEVALFGEKDYQQLQVIRALNQDLHLGADIVGMPTVR CCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHCHHHHCCCCEECCCCCC EPDGLAMSSRNAYLSPEERQRALALSRGLKAAQALLREGTRESEPLVAAVRRELEAAGLR CCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCH EDYVELVDAERLTPLASVAPGQPARLLVAAFSGTTRLIDNMQLGGEENAGRV HHHHHHHHHHHCCHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure APAVLKTVADVKDWTAGLRREGHRLALVPTMGFLHEGHLSLIREGRRRADVVAVSIFVN CHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCHHHCEEEEEEEEC PTQFGPKEDLSRYPRDFEGDVAKCISAGAQAIFAPAGPEVMYPQGYQTYVEVTDVSQGLC CCCCCCHHHHHHCCCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEEEHHHCCCC GARRPGHFRGVATVVTKLLTLFRPEVALFGEKDYQQLQVIRALNQDLHLGADIVGMPTVR CCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHCHHHHCCCCEECCCCCC EPDGLAMSSRNAYLSPEERQRALALSRGLKAAQALLREGTRESEPLVAAVRRELEAAGLR CCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCH EDYVELVDAERLTPLASVAPGQPARLLVAAFSGTTRLIDNMQLGGEENAGRV HHHHHHHHHHHCCHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA