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The map label for this gene is holA

Identifier: 108761070

GI number: 108761070

Start: 3269391

End: 3270725

Strand: Direct

Name: holA

Synonym: MXAN_2801

Alternate gene names: NA

Gene position: 3269391-3270725 (Clockwise)

Preceding gene: 108759549

Following gene: 108761368

Centisome position: 35.77

GC content: 69.66

Gene sequence:

>1335_bases
ATGAGCGCCAGTGAGATGGATGACGTGCTGGCGAGCGTGAAGGGGGGCAAGGTCGCCCCGGTGTACCTCTTGGTGGGCGA
GGAATTCCTGGTCCGCAAGGGCGCTGACGAGCTGGTGAAGCTGCTCGTCCCCGACGCGGCCATGGGCCTCAACCTGGCCG
TGTTGGACGCGGGCAGCCCGCGCGAGGTGGCGCAGGAGCTGGCCACGCTGCCGCTGTTCCCCGGCCGCAAGGTGGTGCTG
GTCCGCGACCCGGAGTTCCTGGCGCCCAAGAAGGGGCGAGGGGACGCGCTGGGCAAGGCACGCGAGGCGTGGAAGGCGGG
CAAGCGAAAGGAGGGCGCGCGGCGACTGTTGGCGCTGGCGGCCCGTGCTGGCTGGGGCGTGGACCAGTTGGACCCGAGCA
CGCCCGGGGCTCCGTCGGTGGAGAAGTGGAAGGACGAGCTCAACGTCGAGCTGGCCGACGTGGACGTGGCCTTCCTCAAG
GAGGCGGCCGCCTTCTGCCGCGAGGAGCGCATCTCCGCGCCCGAGGGGGATGCCTCGGCGCTGCTGGACCTCATCCAGAA
GGGCGTGCCGGCGGGCCATGCGCTGGTGCTGGCCGCGTCCGACATGGACGCCAAGAATCCGCTGGTGAAGCTGGCCCACG
ACAAGGGCTACGTCGTCGAGCGGAAGGTGGCGGCGCGTCACAAGGACCTGGACCTGACGGACATCGCCAAGGAGTTCCTG
GCGCCCTTCAAGAAGAAGCTGGGCCCCGGTGCGCTGGACGAACTCAAGGAGCGCATTGGCGGGAACATCCGCCTGCTCCA
GTCGGAACTGGAGAAGCTGGCCACGTATTCGGAAGGGCCCGCCATTGAGCGGGCGGACGTGGCCGCGCTGGTCCACCACG
CGCGCGAGGAGGAGTTCTTCGAGCTGTCCGAGGCGCTCCAGAAGCGCGACTTCGGCGGGGCGCTGTCCTACGCGAATGAC
GCCATGGGGCAGGGGACGCACGCGTTGCAGTTGCTGGGCGCGGTCGCCTCCATCGTTCGGGGCCTGCTGGAGAGCCATGA
GTGGCTGTGGCGCTATGCGGGAGGCAATCCGCCTCGCACCGCGAAGGACGTGGAGGCGCGCGTCTTCCCCCGGCTGGAAG
CGGAGCTGAAGGGCAGCAAGCGGAAGATGCCCAACGCGTGGGCGCTCACGTTCAGCATGAAGGCCGCGGCGGGTTATGAG
CGGCGGGAGCTGCTGGGCGCGCTGGTGGCCTGCGCAGAGGCGGACCTGGCGCTGAAGTCGTCGGCGAACGGCCGGCTGGT
CATCGAGCGGCTGCTGGCCACGGTGTGTGTGCGCCAGCACGGCGCGGGTTATTAG

Upstream 100 bases:

>100_bases
ATTCGCTGCTGGATGCGGCGCGGGCGGCCATTGCCCGGAACGGTGCGCCCCGGCTCCAACTGGAGCGGATGCTCATCGAC
CTGTTCACGGAGGCGTCGCG

Downstream 100 bases:

>100_bases
AGGAGGCGCATATGGCGGACAAGCGTCGTTTCGACCTCTTCGCGGATTTCCTGGTGGAGCGCTTCAACGCGCCGCGGGTC
TTCGACGTGGCGGGCGGGCA

Product: DNA polymerase III subunit delta

Products: NA

Alternate protein names: DNA Polymerase III Subunit Delta; DNA Polymerase III Delta Subunit

Number of amino acids: Translated: 444; Mature: 443

Protein sequence:

>444_residues
MSASEMDDVLASVKGGKVAPVYLLVGEEFLVRKGADELVKLLVPDAAMGLNLAVLDAGSPREVAQELATLPLFPGRKVVL
VRDPEFLAPKKGRGDALGKAREAWKAGKRKEGARRLLALAARAGWGVDQLDPSTPGAPSVEKWKDELNVELADVDVAFLK
EAAAFCREERISAPEGDASALLDLIQKGVPAGHALVLAASDMDAKNPLVKLAHDKGYVVERKVAARHKDLDLTDIAKEFL
APFKKKLGPGALDELKERIGGNIRLLQSELEKLATYSEGPAIERADVAALVHHAREEEFFELSEALQKRDFGGALSYAND
AMGQGTHALQLLGAVASIVRGLLESHEWLWRYAGGNPPRTAKDVEARVFPRLEAELKGSKRKMPNAWALTFSMKAAAGYE
RRELLGALVACAEADLALKSSANGRLVIERLLATVCVRQHGAGY

Sequences:

>Translated_444_residues
MSASEMDDVLASVKGGKVAPVYLLVGEEFLVRKGADELVKLLVPDAAMGLNLAVLDAGSPREVAQELATLPLFPGRKVVL
VRDPEFLAPKKGRGDALGKAREAWKAGKRKEGARRLLALAARAGWGVDQLDPSTPGAPSVEKWKDELNVELADVDVAFLK
EAAAFCREERISAPEGDASALLDLIQKGVPAGHALVLAASDMDAKNPLVKLAHDKGYVVERKVAARHKDLDLTDIAKEFL
APFKKKLGPGALDELKERIGGNIRLLQSELEKLATYSEGPAIERADVAALVHHAREEEFFELSEALQKRDFGGALSYAND
AMGQGTHALQLLGAVASIVRGLLESHEWLWRYAGGNPPRTAKDVEARVFPRLEAELKGSKRKMPNAWALTFSMKAAAGYE
RRELLGALVACAEADLALKSSANGRLVIERLLATVCVRQHGAGY
>Mature_443_residues
SASEMDDVLASVKGGKVAPVYLLVGEEFLVRKGADELVKLLVPDAAMGLNLAVLDAGSPREVAQELATLPLFPGRKVVLV
RDPEFLAPKKGRGDALGKAREAWKAGKRKEGARRLLALAARAGWGVDQLDPSTPGAPSVEKWKDELNVELADVDVAFLKE
AAAFCREERISAPEGDASALLDLIQKGVPAGHALVLAASDMDAKNPLVKLAHDKGYVVERKVAARHKDLDLTDIAKEFLA
PFKKKLGPGALDELKERIGGNIRLLQSELEKLATYSEGPAIERADVAALVHHAREEEFFELSEALQKRDFGGALSYANDA
MGQGTHALQLLGAVASIVRGLLESHEWLWRYAGGNPPRTAKDVEARVFPRLEAELKGSKRKMPNAWALTFSMKAAAGYER
RELLGALVACAEADLALKSSANGRLVIERLLATVCVRQHGAGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47849; Mature: 47717

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASEMDDVLASVKGGKVAPVYLLVGEEFLVRKGADELVKLLVPDAAMGLNLAVLDAGSP
CCHHHHHHHHHHCCCCCEEEEEEEECCHHHHHCCHHHHHHHHCCCHHCCCEEEEECCCCH
REVAQELATLPLFPGRKVVLVRDPEFLAPKKGRGDALGKAREAWKAGKRKEGARRLLALA
HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
ARAGWGVDQLDPSTPGAPSVEKWKDELNVELADVDVAFLKEAAAFCREERISAPEGDASA
HHCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LLDLIQKGVPAGHALVLAASDMDAKNPLVKLAHDKGYVVERKVAARHKDLDLTDIAKEFL
HHHHHHCCCCCCCEEEEEECCCCCCCCCEEEECCCCCEEHHHHHHHCCCCCHHHHHHHHH
APFKKKLGPGALDELKERIGGNIRLLQSELEKLATYSEGPAIERADVAALVHHAREEEFF
HHHHHHCCCCHHHHHHHHHCCCEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
ELSEALQKRDFGGALSYANDAMGQGTHALQLLGAVASIVRGLLESHEWLWRYAGGNPPRT
HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AKDVEARVFPRLEAELKGSKRKMPNAWALTFSMKAAAGYERRELLGALVACAEADLALKS
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHC
SANGRLVIERLLATVCVRQHGAGY
CCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SASEMDDVLASVKGGKVAPVYLLVGEEFLVRKGADELVKLLVPDAAMGLNLAVLDAGSP
CHHHHHHHHHHCCCCCEEEEEEEECCHHHHHCCHHHHHHHHCCCHHCCCEEEEECCCCH
REVAQELATLPLFPGRKVVLVRDPEFLAPKKGRGDALGKAREAWKAGKRKEGARRLLALA
HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
ARAGWGVDQLDPSTPGAPSVEKWKDELNVELADVDVAFLKEAAAFCREERISAPEGDASA
HHCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LLDLIQKGVPAGHALVLAASDMDAKNPLVKLAHDKGYVVERKVAARHKDLDLTDIAKEFL
HHHHHHCCCCCCCEEEEEECCCCCCCCCEEEECCCCCEEHHHHHHHCCCCCHHHHHHHHH
APFKKKLGPGALDELKERIGGNIRLLQSELEKLATYSEGPAIERADVAALVHHAREEEFF
HHHHHHCCCCHHHHHHHHHCCCEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
ELSEALQKRDFGGALSYANDAMGQGTHALQLLGAVASIVRGLLESHEWLWRYAGGNPPRT
HHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
AKDVEARVFPRLEAELKGSKRKMPNAWALTFSMKAAAGYERRELLGALVACAEADLALKS
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHHHC
SANGRLVIERLLATVCVRQHGAGY
CCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA