| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yigZ [C]
Identifier: 108761059
GI number: 108761059
Start: 3314845
End: 3315471
Strand: Direct
Name: yigZ [C]
Synonym: MXAN_2845
Alternate gene names: 108761059
Gene position: 3314845-3315471 (Clockwise)
Preceding gene: 108761886
Following gene: 108761837
Centisome position: 36.27
GC content: 69.38
Gene sequence:
>627_bases ATGGACGAGAAGCGCTACCCCATCCCGGCCGGGCTCCACCGGGTGGAGCAGGACATCCAGAAGAGCCGCTTCATCACCAC GGCCGCCCATGCGCCCACCGTGGAAGAGGCGAAGGCCTTCATCGCCCGCGTCCGCGAGGAGTTCGCCGACGCCACCCACA ACTGCTGGGCCTTCGTCGTCGGGCCTCCGGGCTCCACCGCCCAGGTGGGCATGAGCGACGACGGCGAACCCCATGGAACG GCCGGCCGGCCCATGCTCACCGCCCTGCTCCACGGGGGCGTGGGCGACGTGGCCATGGTCGTCACCCGGTATTTCGGCGG GACGCTGCTCGGGAAGGGCGGGCTGGTGCGCGCCTATACCGCTGGCGTCCAGCAGGCGCTCGAAAGCCTCCCCACCACGG AGCGTGTGCGCAAGACGCGACTGGCCGTCGAGGTGGAGTACACCCACGTCGATGGGTTGCGCCGCCTGCTGCCGTCCTAC GAGGTGCAGGTCCTGGCGGAGGAGTATTCGGCCACCGTGGGATACCGGCTGGAGCTGCCCGTCACCCAAGTGGAGGCCCT GCGGACCGCGTTGAACGACCTGACCTTGGGACAGGTGCTCGTCGAGCCGCTCGATTCGGACGATTGA
Upstream 100 bases:
>100_bases TGGCGCAACGCGGCGCCGCCTCCGGATTCTTCCTTCGCGTTGACCTGTGGCGGCGGGACGGCTGCTGGCGATATGAGACA CTGCGTCAGTTACCGCACCC
Downstream 100 bases:
>100_bases CCCTGGGCCACGGAGGGGAGAGCCTGCGGCCCGATGAGCGCTGGACCCGACCTCTTCTCCGCCTCTGTCGACGTGAATCG CTTCGCGCCCCTGGCGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MDEKRYPIPAGLHRVEQDIQKSRFITTAAHAPTVEEAKAFIARVREEFADATHNCWAFVVGPPGSTAQVGMSDDGEPHGT AGRPMLTALLHGGVGDVAMVVTRYFGGTLLGKGGLVRAYTAGVQQALESLPTTERVRKTRLAVEVEYTHVDGLRRLLPSY EVQVLAEEYSATVGYRLELPVTQVEALRTALNDLTLGQVLVEPLDSDD
Sequences:
>Translated_208_residues MDEKRYPIPAGLHRVEQDIQKSRFITTAAHAPTVEEAKAFIARVREEFADATHNCWAFVVGPPGSTAQVGMSDDGEPHGT AGRPMLTALLHGGVGDVAMVVTRYFGGTLLGKGGLVRAYTAGVQQALESLPTTERVRKTRLAVEVEYTHVDGLRRLLPSY EVQVLAEEYSATVGYRLELPVTQVEALRTALNDLTLGQVLVEPLDSDD >Mature_208_residues MDEKRYPIPAGLHRVEQDIQKSRFITTAAHAPTVEEAKAFIARVREEFADATHNCWAFVVGPPGSTAQVGMSDDGEPHGT AGRPMLTALLHGGVGDVAMVVTRYFGGTLLGKGGLVRAYTAGVQQALESLPTTERVRKTRLAVEVEYTHVDGLRRLLPSY EVQVLAEEYSATVGYRLELPVTQVEALRTALNDLTLGQVLVEPLDSDD
Specific function: Unknown
COG id: COG1739
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IMPACT family [H]
Homologues:
Organism=Escherichia coli, GI87082338, Length=196, Percent_Identity=44.3877551020408, Blast_Score=147, Evalue=4e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR020568 - InterPro: IPR000640 - InterPro: IPR015796 - InterPro: IPR015269 - InterPro: IPR020569 - InterPro: IPR001498 [H]
Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]
EC number: NA
Molecular weight: Translated: 22599; Mature: 22599
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS00910 UPF0029
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEKRYPIPAGLHRVEQDIQKSRFITTAAHAPTVEEAKAFIARVREEFADATHNCWAFVV CCCCCCCCCHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEE GPPGSTAQVGMSDDGEPHGTAGRPMLTALLHGGVGDVAMVVTRYFGGTLLGKGGLVRAYT CCCCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCEEECCCCCHHHHH AGVQQALESLPTTERVRKTRLAVEVEYTHVDGLRRLLPSYEVQVLAEEYSATVGYRLELP HHHHHHHHHCCCHHHHHHHHHEEEEEEHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECC VTQVEALRTALNDLTLGQVLVEPLDSDD HHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDEKRYPIPAGLHRVEQDIQKSRFITTAAHAPTVEEAKAFIARVREEFADATHNCWAFVV CCCCCCCCCHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEE GPPGSTAQVGMSDDGEPHGTAGRPMLTALLHGGVGDVAMVVTRYFGGTLLGKGGLVRAYT CCCCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCEEECCCCCHHHHH AGVQQALESLPTTERVRKTRLAVEVEYTHVDGLRRLLPSYEVQVLAEEYSATVGYRLELP HHHHHHHHHCCCHHHHHHHHHEEEEEEHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECC VTQVEALRTALNDLTLGQVLVEPLDSDD HHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]