Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is gsiB [H]

Identifier: 108761036

GI number: 108761036

Start: 4628841

End: 4629302

Strand: Reverse

Name: gsiB [H]

Synonym: MXAN_3850

Alternate gene names: 108761036

Gene position: 4629302-4628841 (Counterclockwise)

Preceding gene: 108764022

Following gene: 108758684

Centisome position: 50.65

GC content: 69.7

Gene sequence:

>462_bases
ATGTCGGACAAGGACAACAAGGGCAGCATGACGGTGGCCGAAGCGGGCCGGAAGGGTGGCGAGACGGTCCGGAACGAACG
CGGTCGCGAGTTCTACGAGACGATCGGCCGCAAGGGCGGCGCCACGGTGAAGGCCGAGCGCGGTCGCTCCTTCTACGAGG
AGATTGGCCGCAAGGGCGGCGAGACGGTGAAGGCCGAGCGCGGCGCCAAGTTCTACGAGGAGATCGGCAAGAAGGGTGGC
GACAGGGTGAAGGCCACCCGGGGGCCGAACTTCTACGAGGAGATTGGCCGCAAGGGTGGGCAGAAGGTGAAGAAGCTCAT
CGAAGAGGGCAAGCGGGCCGCGCGGGCCGCCATGGCGGCGCAGGAGGGCGCGGCAGGTGCTCCGCCCCAGGAGGGTGCGG
CGCCGGCGCCATCCACCCCCCCTTCTTCCGGAGAGCCGGCGGGGCCGGGCCAGAACGAGTAG

Upstream 100 bases:

>100_bases
GGTGTACGGAGCTTGCTTGCATCGGGGCGCTTCCGTCCCAAGGTTTCAGGCAAGGGGCACCAAGGCGAGGGCTGGGGTAG
TCACGAGAGGAGATAGGGAA

Downstream 100 bases:

>100_bases
CACCGCGAGCGTGGCGCCAGACTCGCGGACCGACTAAGAGGGCCGCGTGTACTTGGTCATCACGTTCCTCGAACAGTTGG
AAGGAACCGAGCGGGCCATC

Product: putative general stress protein GsiB

Products: NA

Alternate protein names: General stress protein B [H]

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MSDKDNKGSMTVAEAGRKGGETVRNERGREFYETIGRKGGATVKAERGRSFYEEIGRKGGETVKAERGAKFYEEIGKKGG
DRVKATRGPNFYEEIGRKGGQKVKKLIEEGKRAARAAMAAQEGAAGAPPQEGAAPAPSTPPSSGEPAGPGQNE

Sequences:

>Translated_153_residues
MSDKDNKGSMTVAEAGRKGGETVRNERGREFYETIGRKGGATVKAERGRSFYEEIGRKGGETVKAERGAKFYEEIGKKGG
DRVKATRGPNFYEEIGRKGGQKVKKLIEEGKRAARAAMAAQEGAAGAPPQEGAAPAPSTPPSSGEPAGPGQNE
>Mature_152_residues
SDKDNKGSMTVAEAGRKGGETVRNERGREFYETIGRKGGATVKAERGRSFYEEIGRKGGETVKAERGAKFYEEIGKKGGD
RVKATRGPNFYEEIGRKGGQKVKKLIEEGKRAARAAMAAQEGAAGAPPQEGAAPAPSTPPSSGEPAGPGQNE

Specific function: Involved in an adaptative response to nutrient deprivation other than sporulation [H]

COG id: COG3729

COG function: function code R; General stress protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019626
- InterPro:   IPR000389 [H]

Pfam domain/function: PF10685 KGG; PF00477 LEA_5 [H]

EC number: NA

Molecular weight: Translated: 16127; Mature: 15996

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDKDNKGSMTVAEAGRKGGETVRNERGREFYETIGRKGGATVKAERGRSFYEEIGRKGG
CCCCCCCCCCHHHHHCCCCCHHHHHHCCHHHHHHHCCCCCCCEEHHHCHHHHHHHHHCCC
ETVKAERGAKFYEEIGKKGGDRVKATRGPNFYEEIGRKGGQKVKKLIEEGKRAARAAMAA
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
QEGAAGAPPQEGAAPAPSTPPSSGEPAGPGQNE
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDKDNKGSMTVAEAGRKGGETVRNERGREFYETIGRKGGATVKAERGRSFYEEIGRKGG
CCCCCCCCCHHHHHCCCCCHHHHHHCCHHHHHHHCCCCCCCEEHHHCHHHHHHHHHCCC
ETVKAERGAKFYEEIGKKGGDRVKATRGPNFYEEIGRKGGQKVKKLIEEGKRAARAAMAA
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
QEGAAGAPPQEGAAPAPSTPPSSGEPAGPGQNE
HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1378051; 9384377; 8012595 [H]