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The map label for this gene is nrdR

Identifier: 108760844

GI number: 108760844

Start: 5966328

End: 5966834

Strand: Reverse

Name: nrdR

Synonym: MXAN_4765

Alternate gene names: 108760844

Gene position: 5966834-5966328 (Counterclockwise)

Preceding gene: 108762445

Following gene: 108757223

Centisome position: 65.28

GC content: 67.46

Gene sequence:

>507_bases
ATGCGCTGCCCCTTCTGTCAGGACGCCGAGAACAAGGTCATCGACTCCCGTGAGTCACACGAGGGCTCCGTCATCCGGCG
GCGCCGCGAGTGCCTGACCTGCAAGCGCCGCTTCACCACGTATGAGCGGGTGGAGGAGCTCTACCCGCTCATCGTGAAGA
AGGACGGGCGGCGCGAGGCGTTCGACCGGGAGAAGATCGTCAACGGGCTGAAGAAGGCGTGTGAGAAGCGGCCCGTGTCC
GCGGATCAGCTCGAGGAGACGGTGGTCGCCATCGAGCGGCAGCTGCAGGGCATGGGCGAGAAGGAAGTGCCCTCGTCCGT
CATCGGCGAGGAGATCATGCGCCGGCTGCGGCAGCTGGACGAGGTGGCCTATGTCCGCTTCGCGTCCGTGTACCGCAGCT
TCCGCGACATCGCGGAGTTCATGGACGAGCTGAAGGCCCTGCGCGAGGCGGAGGCGCGCGAGCAGCGCCAGGCGCCTCCC
TCGGCACCGGTGGACAAGGGCGGTTAG

Upstream 100 bases:

>100_bases
CGCCGCGCTGGCCCGCATCAAGGGGCAGGTGAAGGAGCTTTCGCAGGGGTTCCCGCTCTACGCCTCGCGGTTGAAGTAGA
TTGGCGAGCCGTACCCTTCC

Downstream 100 bases:

>100_bases
AGAAAGCACATGCGGCTGTTGACACGGGCAAGGTTGGAAGCGACACGGGCGCCCCGGGCGAAGCGAGCGGCGGACTTCGA
CCGGGCGGTGGCTGAGTTCT

Product: transcriptional regulator NrdR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MRCPFCQDAENKVIDSRESHEGSVIRRRRECLTCKRRFTTYERVEELYPLIVKKDGRREAFDREKIVNGLKKACEKRPVS
ADQLEETVVAIERQLQGMGEKEVPSSVIGEEIMRRLRQLDEVAYVRFASVYRSFRDIAEFMDELKALREAEAREQRQAPP
SAPVDKGG

Sequences:

>Translated_168_residues
MRCPFCQDAENKVIDSRESHEGSVIRRRRECLTCKRRFTTYERVEELYPLIVKKDGRREAFDREKIVNGLKKACEKRPVS
ADQLEETVVAIERQLQGMGEKEVPSSVIGEEIMRRLRQLDEVAYVRFASVYRSFRDIAEFMDELKALREAEAREQRQAPP
SAPVDKGG
>Mature_168_residues
MRCPFCQDAENKVIDSRESHEGSVIRRRRECLTCKRRFTTYERVEELYPLIVKKDGRREAFDREKIVNGLKKACEKRPVS
ADQLEETVVAIERQLQGMGEKEVPSSVIGEEIMRRLRQLDEVAYVRFASVYRSFRDIAEFMDELKALREAEAREQRQAPP
SAPVDKGG

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain

Homologues:

Organism=Escherichia coli, GI1786615, Length=147, Percent_Identity=53.0612244897959, Blast_Score=160, Evalue=4e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NRDR_MYXXD (Q1D346)

Other databases:

- EMBL:   CP000113
- RefSeq:   YP_632927.1
- STRING:   Q1D346
- GeneID:   4104406
- GenomeReviews:   CP000113_GR
- KEGG:   mxa:MXAN_4765
- TIGR:   MXAN_4765
- eggNOG:   COG1327
- HOGENOM:   HBG351755
- OMA:   FASVYRD
- PhylomeDB:   Q1D346
- ProtClustDB:   PRK00464
- BioCyc:   MXAN246197:MXAN_4765-MONOMER
- GO:   GO:0006350
- HAMAP:   MF_00440
- InterPro:   IPR005144
- InterPro:   IPR003796
- TIGRFAMs:   TIGR00244

Pfam domain/function: PF03477 ATP-cone

EC number: NA

Molecular weight: Translated: 19538; Mature: 19538

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCPFCQDAENKVIDSRESHEGSVIRRRRECLTCKRRFTTYERVEELYPLIVKKDGRREA
CCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
FDREKIVNGLKKACEKRPVSADQLEETVVAIERQLQGMGEKEVPSSVIGEEIMRRLRQLD
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
EVAYVRFASVYRSFRDIAEFMDELKALREAEAREQRQAPPSAPVDKGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRCPFCQDAENKVIDSRESHEGSVIRRRRECLTCKRRFTTYERVEELYPLIVKKDGRREA
CCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
FDREKIVNGLKKACEKRPVSADQLEETVVAIERQLQGMGEKEVPSSVIGEEIMRRLRQLD
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
EVAYVRFASVYRSFRDIAEFMDELKALREAEAREQRQAPPSAPVDKGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA