| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is nfrB [C]
Identifier: 108760731
GI number: 108760731
Start: 5849462
End: 5850478
Strand: Reverse
Name: nfrB [C]
Synonym: MXAN_4666
Alternate gene names: 108760731
Gene position: 5850478-5849462 (Counterclockwise)
Preceding gene: 108762287
Following gene: 108757774
Centisome position: 64.01
GC content: 71.98
Gene sequence:
>1017_bases ATGCGCAAGAAGATTGGTGAGCTGCTCGTCGAGGCCGGCGTCGTGACGGAGGAGCAGGTCCGCGTGGCATTGGGACGTCG GGGCGCATTCGGCAGTCATCGCCTGGGTGAGGTGCTGGTGGCGCAGGGGCTGTGCACGCCCACGCACATCGCGCAGGCCC TGTCCGCCCAGCACGCGCTTCCCTTCGTGGCGCTGCCGGAGGAGATTCCGGCGAACGTCGCGGGTTTGGTGTCCGTGGAC TTCCAGTCCGAGCACCGCATCCTGCCGTTCCGGATGGAAGTGGAAGGCCGCAGCGAGCGCATCCTCGTCGCGGTGGATGA CCCGGCGGACGTGACGCTCGTGGACGAGCTGCGCTTCCAGCTCCGCAAGCAGATGCGCGTCTTCGTGGCGGCTTCGGACG ACCTGGACGCCGCGCTGGCGCGGGCTCGGGGCGAGCCGCTGGACATCGTGGAAGCCGTGGCCCTGGAGGACGAGGACGGT GCTCCGCCTCCGCCCGTGGCCGCTGGCGCGCCGCTCGAATGGGATTTCCCGGAGGCTCCGAAGCCCGTGCCCAAGTCCGT ACCGCCTTCTCCGCCCCCCGCTGCCCGTCCCCCCTCGCTCCGAGGCTCGGCTTCGCCCCCGCCTCCGCCCCCGGAAGCCA CCGACGGCGACGCCGGCGCGGACGCGCTGGATGACCTGTTGGGCCGGAAGGCCTCGCCCCCGGTGCGGCCCCCGCCGCCT CCGCCTCCCGACGCGGAGGGAGACGGCGCGGAGGGCCGGCCGCGCGTGCCGGTGGTGATGTTCGGAGGGGCGGCGCAGGG CTCGCGTCCGTCGGTGCCGCTCACGCCCACGCCTCAGTTCTCCGACGAGGACCTGGCCATCCTGGACGACATCGAGCGCA TCTCCCGCGGCGAGGATGCCTCGCTGGACACGGAGAAGGTGAAGCCGGCCCGCATGGTGGCCAGCCTCATCCGCCTGCTC ATCCGCAAGGGCGTCATCCAGGAAGGGGAGTTCCTGGAGGAGCTGGCCCAGAAGTGA
Upstream 100 bases:
>100_bases CAAGGAAGTCGCCGCCCTCAAGGCGATGGTGGAGTTGCTCATCGAGAAGGGCGTGTTCAGCCGCGAGGAGTATCTCGCGA AGGTCAAGCGGTAGTCCCCC
Downstream 100 bases:
>100_bases CCGCCGCCGTGACGCCCGCGGGCCAGGAGCTGTTGCTCGACGTCCGAGGGCTGACCACGGAGCTGGCGCTGGAGGAAGGG CCGGTGCGCGCGGTGGACGA
Product: general secretion pathway protein E
Products: NA
Alternate protein names: General Secretion Pathway Protein E
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MRKKIGELLVEAGVVTEEQVRVALGRRGAFGSHRLGEVLVAQGLCTPTHIAQALSAQHALPFVALPEEIPANVAGLVSVD FQSEHRILPFRMEVEGRSERILVAVDDPADVTLVDELRFQLRKQMRVFVAASDDLDAALARARGEPLDIVEAVALEDEDG APPPPVAAGAPLEWDFPEAPKPVPKSVPPSPPPAARPPSLRGSASPPPPPPEATDGDAGADALDDLLGRKASPPVRPPPP PPPDAEGDGAEGRPRVPVVMFGGAAQGSRPSVPLTPTPQFSDEDLAILDDIERISRGEDASLDTEKVKPARMVASLIRLL IRKGVIQEGEFLEELAQK
Sequences:
>Translated_338_residues MRKKIGELLVEAGVVTEEQVRVALGRRGAFGSHRLGEVLVAQGLCTPTHIAQALSAQHALPFVALPEEIPANVAGLVSVD FQSEHRILPFRMEVEGRSERILVAVDDPADVTLVDELRFQLRKQMRVFVAASDDLDAALARARGEPLDIVEAVALEDEDG APPPPVAAGAPLEWDFPEAPKPVPKSVPPSPPPAARPPSLRGSASPPPPPPEATDGDAGADALDDLLGRKASPPVRPPPP PPPDAEGDGAEGRPRVPVVMFGGAAQGSRPSVPLTPTPQFSDEDLAILDDIERISRGEDASLDTEKVKPARMVASLIRLL IRKGVIQEGEFLEELAQK >Mature_338_residues MRKKIGELLVEAGVVTEEQVRVALGRRGAFGSHRLGEVLVAQGLCTPTHIAQALSAQHALPFVALPEEIPANVAGLVSVD FQSEHRILPFRMEVEGRSERILVAVDDPADVTLVDELRFQLRKQMRVFVAASDDLDAALARARGEPLDIVEAVALEDEDG APPPPVAAGAPLEWDFPEAPKPVPKSVPPSPPPAARPPSLRGSASPPPPPPEATDGDAGADALDDLLGRKASPPVRPPPP PPPDAEGDGAEGRPRVPVVMFGGAAQGSRPSVPLTPTPQFSDEDLAILDDIERISRGEDASLDTEKVKPARMVASLIRLL IRKGVIQEGEFLEELAQK
Specific function: Required For Bacteriophage N4 Adsorption. May Be A Component Of The Phage Receptor. [C]
COG id: COG2804
COG function: function code NU; Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35866; Mature: 35866
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKIGELLVEAGVVTEEQVRVALGRRGAFGSHRLGEVLVAQGLCTPTHIAQALSAQHAL CCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCC PFVALPEEIPANVAGLVSVDFQSEHRILPFRMEVEGRSERILVAVDDPADVTLVDELRFQ CEEECCHHHCCCEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCCCEEHHHHHHHH LRKQMRVFVAASDDLDAALARARGEPLDIVEAVALEDEDGAPPPPVAAGAPLEWDFPEAP HHHHHEEEEEECCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC KPVPKSVPPSPPPAARPPSLRGSASPPPPPPEATDGDAGADALDDLLGRKASPPVRPPPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC PPPDAEGDGAEGRPRVPVVMFGGAAQGSRPSVPLTPTPQFSDEDLAILDDIERISRGEDA CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC SLDTEKVKPARMVASLIRLLIRKGVIQEGEFLEELAQK CCCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC >Mature Secondary Structure MRKKIGELLVEAGVVTEEQVRVALGRRGAFGSHRLGEVLVAQGLCTPTHIAQALSAQHAL CCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCC PFVALPEEIPANVAGLVSVDFQSEHRILPFRMEVEGRSERILVAVDDPADVTLVDELRFQ CEEECCHHHCCCEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCCCEEHHHHHHHH LRKQMRVFVAASDDLDAALARARGEPLDIVEAVALEDEDGAPPPPVAAGAPLEWDFPEAP HHHHHEEEEEECCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC KPVPKSVPPSPPPAARPPSLRGSASPPPPPPEATDGDAGADALDDLLGRKASPPVRPPPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC PPPDAEGDGAEGRPRVPVVMFGGAAQGSRPSVPLTPTPQFSDEDLAILDDIERISRGEDA CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC SLDTEKVKPARMVASLIRLLIRKGVIQEGEFLEELAQK CCCHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA