| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is torS [H]
Identifier: 108760711
GI number: 108760711
Start: 369075
End: 371150
Strand: Direct
Name: torS [H]
Synonym: MXAN_0314
Alternate gene names: 108760711
Gene position: 369075-371150 (Clockwise)
Preceding gene: 108760606
Following gene: 108757979
Centisome position: 4.04
GC content: 70.33
Gene sequence:
>2076_bases ATGGGAACTGATACTGATACATGTTTGCCGCGTGTACTTGTGACGGCCACGTATTCGTGTCGACATGGAGCCATTCTGAA CGACCGATTCCAGGCGGCTCCGGCGCCCGACATGGATGTGCTGCTGGTGGCGCTCGAGGAAGCGGAGCGGCACCAGCCTG AGGGCTGCATGGTGTTGCACGCCGTGCGGGACGCGGCGGGAGCGCTCGTCGACTTCCAGTGGGCCTGGGCGAATCCCGCG GGTGCGCGCGCACTGGGGCACGCCGCTCCGGAGTTGCTGAGAGGCCGGCGGCTGCGCGAGCTGATGCCGGGCTCGGGTCT GGCCTCCCGGGTGGACCTGCTCCGGAACGTGGTGGAGGCGGGCCGGCCGGCTGCGGACAGCTTCCAGGAAGGGGACGTGT GGCTTCAGGGAACGGCGGTGCCGCTCCGGGACGGTGTCCTGCTGCGCCTGCGTGACATCACCAGCGCCCTGCGGTTGGAG GAGAGCGTCCGCGAAACCCTGGACTGGGTGCGGAGCATGCTGGAGGCCACACCCGACGCGTTCTTCACGTTGGATGCGGA CTGGCGAATCACCTTCGTGAACCACGAGGCCGCGGCCCTCAGCGGGCGTTCGCAGGAGCAGCTCTTCCGGCAGATTCTGT GGCAGGCGTGCCCGGAGTTGCTGGGCACGCGGATGGAGCGGGAGCTGCGCCGGGTCGCGAGCGGCGCGGGCCACACCATC TTCGAATGGCGCGCCACGCCTGGACGCTGGCATGAGGTGCACGCCTGGGGCGCCAACGGCAACGTGTCCATTTTCGGGCG GGACGTCACCGCCAGGAAGCAGGCGGAGGCGGAGCGGGACGTGCTTCTGTCGCGCGAGCACTCGGGCCGCCTGGAAGCCG AGGCCCTGGTCCACGAGCGCACCCGCGAACTCATGGCCGCGCGTGAGCGACTGGTGCAGTCGGAGAAGCTGGCCATGGCG GGACAGCTCGCGGCGGGCGTGGGGCACGAAATCAACAACCCGCTCTCCTACGTCGTGGGGAACCTGCAGTTCGCGCTGGA GCAGCTCGAGCCCCTCGCAACGCAGGGCGCGGTGCGTGAATCATTGGCCCGCGCGCTGGGCGAGGCGATGGAGGCCCTGC GCGAGGCGAAGGAAGGCGCCGAGCGCATCCGCACCACCGTCCGTGATTTGCAGATCTTCGCTCGAGCGGAGGAGCCGCAA CTGTCGCCCGTGGACGTGCACGCGGCGCTGGAGTTCGGCCTCTCCATGGCGATGCCGCACCTGCGCCACCGGGCCCGCGT CGAGAAGCGCCTGGGCCCGGTGCCCACGGTGATGGCGCACGAGACGCGGCTGGGGCAGGTGTTCCTCCAACTGCTCGTCA ACGCCGCGCAGGCCATCCCGGAAGGGGACGTGGCGCGCTACCAGGTGACGCTCTCCACCTGGAGGGACGGCGCGACGGTG GTGGTGGAGGTGGCGGACAACGGCCACGGCATGGCGCCCGAGGTCCTGGAGCGCGCCTTCGAGCCCTTCTTCACCACCCG TCCCCTGGGGGAGGGCGCTGGACTCGGCCTGTCCACCAGCCTGGGCCTGGTGCGAGGCATGGGAGGCGAGCTGTCGGCAT CGAGCGCGCCGGGCCTGGGCAGTGTCTTCCAGGTGCGGCTGCCCACCACCGACGCGGACGCGCCAGCCGTGCGGGTGGCG GAGGACACGGACCTTCCCGGACGGAAGCGGGTGCTGGTGGTGGATGACGAGCCGCTGCTCGCCTCGGTGCTGGGCCGCAT CCTCGGCGTGCGTCACGAGGTGGTGGTGGTCCACAGCGGGCGCGAGGCGTTGGACACGCTGGCGCGCGACGCGGACTTCG ACCGCATCTTCTGTGACTTGATGATGGGGGACCTGACGGGGATGGACGTGTACGACGCGCTGTCCTCGCGTCAGCCGGAG CTGCTCGCGCGCTTCGTCTTCATGACGGGCGGAGGCTTCTCCGAGCGAGCACGGACCTTCCTCCAGTCGGTGCCGGTGCC GCGCATCGAAAAGCCGTTCGAGCTGGGCGTCCTGCACGCGCTGGTGGAGGACGCCCCGCCGCGCGCCGGTCCCTGA
Upstream 100 bases:
>100_bases CGGTGATGAGGGTGGGCGTCATGGGCGGCCGAGGAGCCTAGCCGCCCGGGCGTCCCCTGCGCGCGCGAGCCAGGTCAAGC GGCGGTTGGCCGACAGACAC
Downstream 100 bases:
>100_bases GAAGGGCGGCCGGCGCGCGACTCGGAAGCGGTGTGACTACAACTTCACTTCTTCCCGGTCGGGCTGGGTGATGTAGCCGG AGCCTGCTGCCACCAGCTTG
Product: sensory box histidine kinase/response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 691; Mature: 690
Protein sequence:
>691_residues MGTDTDTCLPRVLVTATYSCRHGAILNDRFQAAPAPDMDVLLVALEEAERHQPEGCMVLHAVRDAAGALVDFQWAWANPA GARALGHAAPELLRGRRLRELMPGSGLASRVDLLRNVVEAGRPAADSFQEGDVWLQGTAVPLRDGVLLRLRDITSALRLE ESVRETLDWVRSMLEATPDAFFTLDADWRITFVNHEAAALSGRSQEQLFRQILWQACPELLGTRMERELRRVASGAGHTI FEWRATPGRWHEVHAWGANGNVSIFGRDVTARKQAEAERDVLLSREHSGRLEAEALVHERTRELMAARERLVQSEKLAMA GQLAAGVGHEINNPLSYVVGNLQFALEQLEPLATQGAVRESLARALGEAMEALREAKEGAERIRTTVRDLQIFARAEEPQ LSPVDVHAALEFGLSMAMPHLRHRARVEKRLGPVPTVMAHETRLGQVFLQLLVNAAQAIPEGDVARYQVTLSTWRDGATV VVEVADNGHGMAPEVLERAFEPFFTTRPLGEGAGLGLSTSLGLVRGMGGELSASSAPGLGSVFQVRLPTTDADAPAVRVA EDTDLPGRKRVLVVDDEPLLASVLGRILGVRHEVVVVHSGREALDTLARDADFDRIFCDLMMGDLTGMDVYDALSSRQPE LLARFVFMTGGGFSERARTFLQSVPVPRIEKPFELGVLHALVEDAPPRAGP
Sequences:
>Translated_691_residues MGTDTDTCLPRVLVTATYSCRHGAILNDRFQAAPAPDMDVLLVALEEAERHQPEGCMVLHAVRDAAGALVDFQWAWANPA GARALGHAAPELLRGRRLRELMPGSGLASRVDLLRNVVEAGRPAADSFQEGDVWLQGTAVPLRDGVLLRLRDITSALRLE ESVRETLDWVRSMLEATPDAFFTLDADWRITFVNHEAAALSGRSQEQLFRQILWQACPELLGTRMERELRRVASGAGHTI FEWRATPGRWHEVHAWGANGNVSIFGRDVTARKQAEAERDVLLSREHSGRLEAEALVHERTRELMAARERLVQSEKLAMA GQLAAGVGHEINNPLSYVVGNLQFALEQLEPLATQGAVRESLARALGEAMEALREAKEGAERIRTTVRDLQIFARAEEPQ LSPVDVHAALEFGLSMAMPHLRHRARVEKRLGPVPTVMAHETRLGQVFLQLLVNAAQAIPEGDVARYQVTLSTWRDGATV VVEVADNGHGMAPEVLERAFEPFFTTRPLGEGAGLGLSTSLGLVRGMGGELSASSAPGLGSVFQVRLPTTDADAPAVRVA EDTDLPGRKRVLVVDDEPLLASVLGRILGVRHEVVVVHSGREALDTLARDADFDRIFCDLMMGDLTGMDVYDALSSRQPE LLARFVFMTGGGFSERARTFLQSVPVPRIEKPFELGVLHALVEDAPPRAGP >Mature_690_residues GTDTDTCLPRVLVTATYSCRHGAILNDRFQAAPAPDMDVLLVALEEAERHQPEGCMVLHAVRDAAGALVDFQWAWANPAG ARALGHAAPELLRGRRLRELMPGSGLASRVDLLRNVVEAGRPAADSFQEGDVWLQGTAVPLRDGVLLRLRDITSALRLEE SVRETLDWVRSMLEATPDAFFTLDADWRITFVNHEAAALSGRSQEQLFRQILWQACPELLGTRMERELRRVASGAGHTIF EWRATPGRWHEVHAWGANGNVSIFGRDVTARKQAEAERDVLLSREHSGRLEAEALVHERTRELMAARERLVQSEKLAMAG QLAAGVGHEINNPLSYVVGNLQFALEQLEPLATQGAVRESLARALGEAMEALREAKEGAERIRTTVRDLQIFARAEEPQL SPVDVHAALEFGLSMAMPHLRHRARVEKRLGPVPTVMAHETRLGQVFLQLLVNAAQAIPEGDVARYQVTLSTWRDGATVV VEVADNGHGMAPEVLERAFEPFFTTRPLGEGAGLGLSTSLGLVRGMGGELSASSAPGLGSVFQVRLPTTDADAPAVRVAE DTDLPGRKRVLVVDDEPLLASVLGRILGVRHEVVVVHSGREALDTLARDADFDRIFCDLMMGDLTGMDVYDALSSRQPEL LARFVFMTGGGFSERARTFLQSVPVPRIEKPFELGVLHALVEDAPPRAGP
Specific function: Member of the two-component regulatory system torS/torR involved in the anaerobic utilization of trimethylamine-N-oxide (TMAO). Detects the presence of TMAO in the medium and, in response, activates torR via a four-step phosphorelay. When TMAO is removed,
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=254, Percent_Identity=31.496062992126, Blast_Score=107, Evalue=4e-24, Organism=Escherichia coli, GI1788549, Length=412, Percent_Identity=26.6990291262136, Blast_Score=106, Evalue=6e-24, Organism=Escherichia coli, GI87081816, Length=363, Percent_Identity=28.099173553719, Blast_Score=101, Evalue=2e-22, Organism=Escherichia coli, GI48994928, Length=544, Percent_Identity=23.7132352941176, Blast_Score=93, Evalue=5e-20, Organism=Escherichia coli, GI145693157, Length=448, Percent_Identity=25.4464285714286, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1788713, Length=295, Percent_Identity=23.728813559322, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1790300, Length=394, Percent_Identity=25.6345177664975, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR014302 - InterPro: IPR001789 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF01627 Hpt; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 75566; Mature: 75435
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: PS50112 PAS ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTDTDTCLPRVLVTATYSCRHGAILNDRFQAAPAPDMDVLLVALEEAERHQPEGCMVLH CCCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEHH AVRDAAGALVDFQWAWANPAGARALGHAAPELLRGRRLRELMPGSGLASRVDLLRNVVEA HHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC GRPAADSFQEGDVWLQGTAVPLRDGVLLRLRDITSALRLEESVRETLDWVRSMLEATPDA CCCCCCCCCCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FFTLDADWRITFVNHEAAALSGRSQEQLFRQILWQACPELLGTRMERELRRVASGAGHTI EEEECCCEEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE FEWRATPGRWHEVHAWGANGNVSIFGRDVTARKQAEAERDVLLSREHSGRLEAEALVHER EEEECCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH TRELMAARERLVQSEKLAMAGQLAAGVGHEINNPLSYVVGNLQFALEQLEPLATQGAVRE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SLARALGEAMEALREAKEGAERIRTTVRDLQIFARAEEPQLSPVDVHAALEFGLSMAMPH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH LRHRARVEKRLGPVPTVMAHETRLGQVFLQLLVNAAQAIPEGDVARYQVTLSTWRDGATV HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEE VVEVADNGHGMAPEVLERAFEPFFTTRPLGEGAGLGLSTSLGLVRGMGGELSASSAPGLG EEEECCCCCCCCHHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC SVFQVRLPTTDADAPAVRVAEDTDLPGRKRVLVVDDEPLLASVLGRILGVRHEVVVVHSG CEEEEEECCCCCCCCEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECC REALDTLARDADFDRIFCDLMMGDLTGMDVYDALSSRQPELLARFVFMTGGGFSERARTF HHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH LQSVPVPRIEKPFELGVLHALVEDAPPRAGP HHHCCCCCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure GTDTDTCLPRVLVTATYSCRHGAILNDRFQAAPAPDMDVLLVALEEAERHQPEGCMVLH CCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEHH AVRDAAGALVDFQWAWANPAGARALGHAAPELLRGRRLRELMPGSGLASRVDLLRNVVEA HHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC GRPAADSFQEGDVWLQGTAVPLRDGVLLRLRDITSALRLEESVRETLDWVRSMLEATPDA CCCCCCCCCCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FFTLDADWRITFVNHEAAALSGRSQEQLFRQILWQACPELLGTRMERELRRVASGAGHTI EEEECCCEEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE FEWRATPGRWHEVHAWGANGNVSIFGRDVTARKQAEAERDVLLSREHSGRLEAEALVHER EEEECCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH TRELMAARERLVQSEKLAMAGQLAAGVGHEINNPLSYVVGNLQFALEQLEPLATQGAVRE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SLARALGEAMEALREAKEGAERIRTTVRDLQIFARAEEPQLSPVDVHAALEFGLSMAMPH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH LRHRARVEKRLGPVPTVMAHETRLGQVFLQLLVNAAQAIPEGDVARYQVTLSTWRDGATV HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEE VVEVADNGHGMAPEVLERAFEPFFTTRPLGEGAGLGLSTSLGLVRGMGGELSASSAPGLG EEEECCCCCCCCHHHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC SVFQVRLPTTDADAPAVRVAEDTDLPGRKRVLVVDDEPLLASVLGRILGVRHEVVVVHSG CEEEEEECCCCCCCCEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECC REALDTLARDADFDRIFCDLMMGDLTGMDVYDALSSRQPELLARFVFMTGGGFSERARTF HHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHH LQSVPVPRIEKPFELGVLHALVEDAPPRAGP HHHCCCCCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]