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The map label for this gene is recO

Identifier: 108760610

GI number: 108760610

Start: 3612165

End: 3612899

Strand: Direct

Name: recO

Synonym: MXAN_3086

Alternate gene names: 108760610

Gene position: 3612165-3612899 (Clockwise)

Preceding gene: 108762224

Following gene: 108757155

Centisome position: 39.52

GC content: 69.93

Gene sequence:

>735_bases
ATGGAGCGATACGACGACGACGCGCTCGTGCTGTCCTCGGTGGACTATGGCGAGTCCGACCGGCTCGTCACCTTGCTGAC
GCGCGAGCATGGGAAGCTGACGGCCTTCGCCGCGGGCGCACGCAAGAGCAAGCGGCGCTTCGCCGGCGCGCTGGAGCCGT
TCATGCGGCTTCGCGTGCACATCGTGGAGACGCGCGGCAGCACGGTGCGGCTGGACGGCACAGACATCGTCGCGGGCTTC
TATGCGGCGCGCGAGGACCTGTCCCTGATTGCCCGGGCCTTGTACGCGGTGGAGCTGTGCCGCGAGCTGACGCGGGACCA
TGAGCCGCAGCCGGAGCTGTTTGCCCTGCTGGAGTCGTACCTGACGCGACTGGATGCGAAGGAGGCCGGGCCCACGTCGC
TCTTGGCTTTCGAGCTGTCCGCGCTGGCGCACGCGGGGTTGATGCCTCGGTTTGATTCGTGCTCGCTGTGTGGCGGCGCT
CCGGGCGAGCGGCCTCGTTTCGACCAGGCCCATGGCGGCGCGGTGTGTGAGCCGTGTGGAGTCCGTGCTCGCGAGTCCGT
GGCGGTGCCGGTGGCGCTGCTGTCGGGCCTGCGCGCGCTCCAGGAAGGGGCGCGCACGCCGCTCCCGCCGGAGCTGCGCG
CGCGTGCTCGCGGCCTGCTCAACGTCTTCATTGCCCATCACCTGGGTCGCCGCCTCAAGAGCGTGGACTTCATGGCCCAG
GTGGGCCTGGATTGA

Upstream 100 bases:

>100_bases
GGGGCTGTCCGTGCTGCTGGCGGCCCTGCTCCTGGGCGTGTACCTGTTCCTGGTGCTGAGCGGAAAGCTTCCCAATCCGC
TCGCGCGTTGAAGCATCTCC

Downstream 100 bases:

>100_bases
CGAAGTTCGGAAGCGAGGGGCTCATGCCGCCGCTGGATGTCGTGTGCTTTGGCGAGACGTTGGTGGACTTCCTCCCGGCG
GCTCCAGGGCACCGCGTGCG

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MERYDDDALVLSSVDYGESDRLVTLLTREHGKLTAFAAGARKSKRRFAGALEPFMRLRVHIVETRGSTVRLDGTDIVAGF
YAAREDLSLIARALYAVELCRELTRDHEPQPELFALLESYLTRLDAKEAGPTSLLAFELSALAHAGLMPRFDSCSLCGGA
PGERPRFDQAHGGAVCEPCGVRARESVAVPVALLSGLRALQEGARTPLPPELRARARGLLNVFIAHHLGRRLKSVDFMAQ
VGLD

Sequences:

>Translated_244_residues
MERYDDDALVLSSVDYGESDRLVTLLTREHGKLTAFAAGARKSKRRFAGALEPFMRLRVHIVETRGSTVRLDGTDIVAGF
YAAREDLSLIARALYAVELCRELTRDHEPQPELFALLESYLTRLDAKEAGPTSLLAFELSALAHAGLMPRFDSCSLCGGA
PGERPRFDQAHGGAVCEPCGVRARESVAVPVALLSGLRALQEGARTPLPPELRARARGLLNVFIAHHLGRRLKSVDFMAQ
VGLD
>Mature_244_residues
MERYDDDALVLSSVDYGESDRLVTLLTREHGKLTAFAAGARKSKRRFAGALEPFMRLRVHIVETRGSTVRLDGTDIVAGF
YAAREDLSLIARALYAVELCRELTRDHEPQPELFALLESYLTRLDAKEAGPTSLLAFELSALAHAGLMPRFDSCSLCGGA
PGERPRFDQAHGGAVCEPCGVRARESVAVPVALLSGLRALQEGARTPLPPELRARARGLLNVFIAHHLGRRLKSVDFMAQ
VGLD

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_MYXXD (Q1D7T4)

Other databases:

- EMBL:   CP000113
- RefSeq:   YP_631289.1
- ProteinModelPortal:   Q1D7T4
- SMR:   Q1D7T4
- STRING:   Q1D7T4
- GeneID:   4104130
- GenomeReviews:   CP000113_GR
- KEGG:   mxa:MXAN_3086
- TIGR:   MXAN_3086
- eggNOG:   COG1381
- HOGENOM:   HBG634481
- OMA:   WHLERGL
- ProtClustDB:   CLSK945592
- BioCyc:   MXAN246197:MXAN_3086-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 26650; Mature: 26650

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERYDDDALVLSSVDYGESDRLVTLLTREHGKLTAFAAGARKSKRRFAGALEPFMRLRVH
CCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
IVETRGSTVRLDGTDIVAGFYAAREDLSLIARALYAVELCRELTRDHEPQPELFALLESY
EEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LTRLDAKEAGPTSLLAFELSALAHAGLMPRFDSCSLCGGAPGERPRFDQAHGGAVCEPCG
HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VRARESVAVPVALLSGLRALQEGARTPLPPELRARARGLLNVFIAHHLGRRLKSVDFMAQ
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLD
HCCC
>Mature Secondary Structure
MERYDDDALVLSSVDYGESDRLVTLLTREHGKLTAFAAGARKSKRRFAGALEPFMRLRVH
CCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH
IVETRGSTVRLDGTDIVAGFYAAREDLSLIARALYAVELCRELTRDHEPQPELFALLESY
EEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LTRLDAKEAGPTSLLAFELSALAHAGLMPRFDSCSLCGGAPGERPRFDQAHGGAVCEPCG
HHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VRARESVAVPVALLSGLRALQEGARTPLPPELRARARGLLNVFIAHHLGRRLKSVDFMAQ
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGLD
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA