| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is cscK [H]
Identifier: 108757155
GI number: 108757155
Start: 3612896
End: 3613918
Strand: Direct
Name: cscK [H]
Synonym: MXAN_3087
Alternate gene names: 108757155
Gene position: 3612896-3613918 (Clockwise)
Preceding gene: 108760610
Following gene: 108759627
Centisome position: 39.53
GC content: 69.79
Gene sequence:
>1023_bases TTGACGAAGTTCGGAAGCGAGGGGCTCATGCCGCCGCTGGATGTCGTGTGCTTTGGCGAGACGTTGGTGGACTTCCTCCC GGCGGCTCCAGGGCACCGCGTGCGCGACGTGCCCGCGTGGCATCCGTGCCCTGGTGGCTCGCCGGCGAATGTCGCGGTGG GGCTGGCCCGGTTGGGGCTGCGTCCAGCCATGCTGGGCGTGGTGGGCGCGGATGAGTTCGGGCACTTCCTTCGCGAGCGA TTGGCGGCGGAAGGCGTGGACGTGAGTCACCTGCGCCAGACGGCGGAGGCTCGCACCGGGCTGGTGTTCATCTCCCTGGA TGGGAAGGGCGAGCGCAGCTTCACCTTCTTCCGGACACGCTCCGCTGAGTTCCTGCTGGGACAGGCGGATGTCGACGCGG CGTTCCTGTCGGGGGCGAAGGCAGTGCACTGTGGTTCCAACTCGCTCCAGTGGCCGGAGGCGCAGGAGGCCGCGGTGCGG ATGCTGGGGCTGGCGCGCGACGCGGGCCTCATCGTGAGTTGTGACCCCAACTTGCGGCTGCACGCGTGGGAGGACACGTC TCTCCTGAAGGGCCTGCTGGCGCGGATGCTGCCGCTGTGCACCGTGGTGAAGCTCTCCGAGGAGGAGATTGGCTTCGTCA CGGGGACGGAGGTGCCCCACGAAGCGCTGACGCGACTGGCCGCGATGGGCGTGCCGCTGCCCGTGGTGACGCTGGGCGAG CGTGGCGCGCTGCTGCAGTGGAAGGGGGAGTGCATCCACGTCGCGGCGCCGCAGGCGCGCGTCGTCGACACCACCGGTGC TGGCGATGGTTTCGTCGCGGGCCTGCTTCAGGGGCTGGTGCGCTGGTACGGCGGCGCTGGGGGGCTGCGTGATGCAACCG GTGAGGAGTTGGTGACGCTGGCCACGTTCGCGTGTGAGGTCGGGGCCCGTGTCGTGGAGAAGCTCGGTGCGGTGGATGGG CTTCCCCGGGCGGAAGTGCTGGCTCACGTCATGCCGTCGCGTCCGGACAGCTCTCGCGCATAG
Upstream 100 bases:
>100_bases AGCTGCGCGCGCGTGCTCGCGGCCTGCTCAACGTCTTCATTGCCCATCACCTGGGTCGCCGCCTCAAGAGCGTGGACTTC ATGGCCCAGGTGGGCCTGGA
Downstream 100 bases:
>100_bases TGCTGTGACGGTGGTGTCGTCGCGTCCGACGAACAATCTTCTGTTGTCGTGCGCACGGTTTGACGCGGGCGCTTGCTTGG TGCCCGCGCTCCTCGTTGAC
Product: fructokinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MTKFGSEGLMPPLDVVCFGETLVDFLPAAPGHRVRDVPAWHPCPGGSPANVAVGLARLGLRPAMLGVVGADEFGHFLRER LAAEGVDVSHLRQTAEARTGLVFISLDGKGERSFTFFRTRSAEFLLGQADVDAAFLSGAKAVHCGSNSLQWPEAQEAAVR MLGLARDAGLIVSCDPNLRLHAWEDTSLLKGLLARMLPLCTVVKLSEEEIGFVTGTEVPHEALTRLAAMGVPLPVVTLGE RGALLQWKGECIHVAAPQARVVDTTGAGDGFVAGLLQGLVRWYGGAGGLRDATGEELVTLATFACEVGARVVEKLGAVDG LPRAEVLAHVMPSRPDSSRA
Sequences:
>Translated_340_residues MTKFGSEGLMPPLDVVCFGETLVDFLPAAPGHRVRDVPAWHPCPGGSPANVAVGLARLGLRPAMLGVVGADEFGHFLRER LAAEGVDVSHLRQTAEARTGLVFISLDGKGERSFTFFRTRSAEFLLGQADVDAAFLSGAKAVHCGSNSLQWPEAQEAAVR MLGLARDAGLIVSCDPNLRLHAWEDTSLLKGLLARMLPLCTVVKLSEEEIGFVTGTEVPHEALTRLAAMGVPLPVVTLGE RGALLQWKGECIHVAAPQARVVDTTGAGDGFVAGLLQGLVRWYGGAGGLRDATGEELVTLATFACEVGARVVEKLGAVDG LPRAEVLAHVMPSRPDSSRA >Mature_339_residues TKFGSEGLMPPLDVVCFGETLVDFLPAAPGHRVRDVPAWHPCPGGSPANVAVGLARLGLRPAMLGVVGADEFGHFLRERL AAEGVDVSHLRQTAEARTGLVFISLDGKGERSFTFFRTRSAEFLLGQADVDAAFLSGAKAVHCGSNSLQWPEAQEAAVRM LGLARDAGLIVSCDPNLRLHAWEDTSLLKGLLARMLPLCTVVKLSEEEIGFVTGTEVPHEALTRLAAMGVPLPVVTLGER GALLQWKGECIHVAAPQARVVDTTGAGDGFVAGLLQGLVRWYGGAGGLRDATGEELVTLATFACEVGARVVEKLGAVDGL PRAEVLAHVMPSRPDSSRA
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
Organism=Homo sapiens, GI11545855, Length=240, Percent_Identity=29.1666666666667, Blast_Score=72, Evalue=6e-13, Organism=Escherichia coli, GI87081971, Length=332, Percent_Identity=25.9036144578313, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI87082281, Length=264, Percent_Identity=29.9242424242424, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1789775, Length=235, Percent_Identity=28.0851063829787, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1790193, Length=242, Percent_Identity=24.3801652892562, Blast_Score=62, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17532905, Length=290, Percent_Identity=29.6551724137931, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI20128807, Length=299, Percent_Identity=32.4414715719064, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI24583886, Length=291, Percent_Identity=26.4604810996564, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR002139 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.4 [H]
Molecular weight: Translated: 35854; Mature: 35722
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKFGSEGLMPPLDVVCFGETLVDFLPAAPGHRVRDVPAWHPCPGGSPANVAVGLARLGL CCCCCCCCCCCCHHHEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC RPAMLGVVGADEFGHFLRERLAAEGVDVSHLRQTAEARTGLVFISLDGKGERSFTFFRTR CHHHHEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEEC SAEFLLGQADVDAAFLSGAKAVHCGSNSLQWPEAQEAAVRMLGLARDAGLIVSCDPNLRL CCEEEEECCCCCHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEE HAWEDTSLLKGLLARMLPLCTVVKLSEEEIGFVTGTEVPHEALTRLAAMGVPLPVVTLGE EEECCHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCCHHHHHHHHHCCCCCCEEEECC RGALLQWKGECIHVAAPQARVVDTTGAGDGFVAGLLQGLVRWYGGAGGLRDATGEELVTL CCCEEEECCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH ATFACEVGARVVEKLGAVDGLPRAEVLAHVMPSRPDSSRA HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TKFGSEGLMPPLDVVCFGETLVDFLPAAPGHRVRDVPAWHPCPGGSPANVAVGLARLGL CCCCCCCCCCCHHHEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC RPAMLGVVGADEFGHFLRERLAAEGVDVSHLRQTAEARTGLVFISLDGKGERSFTFFRTR CHHHHEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCCCCCCEEEEEEC SAEFLLGQADVDAAFLSGAKAVHCGSNSLQWPEAQEAAVRMLGLARDAGLIVSCDPNLRL CCEEEEECCCCCHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEE HAWEDTSLLKGLLARMLPLCTVVKLSEEEIGFVTGTEVPHEALTRLAAMGVPLPVVTLGE EEECCHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCCHHHHHHHHHCCCCCCEEEECC RGALLQWKGECIHVAAPQARVVDTTGAGDGFVAGLLQGLVRWYGGAGGLRDATGEELVTL CCCEEEECCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH ATFACEVGARVVEKLGAVDGLPRAEVLAHVMPSRPDSSRA HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1809835 [H]