| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760596
Identifier: 108760596
GI number: 108760596
Start: 2140770
End: 2142578
Strand: Direct
Name: 108760596
Synonym: MXAN_1811
Alternate gene names: NA
Gene position: 2140770-2142578 (Clockwise)
Preceding gene: 108757862
Following gene: 108759730
Centisome position: 23.42
GC content: 71.75
Gene sequence:
>1809_bases GTGCTGGCACTGGGGTGTTCCCGGCCGTGGAAGCGGGAAGACTCCAGGACGTGGGAGGGTTGCTGCCAGGGGGCTGACGC GTGCCTTGCGCTGCTGCAGGAGCTCCACGGGCCCGACACAGGGGAGAAGTGGCTGCCGCCGGAGCAGGCGTGTGCGGCCT GGAAACTGGGGCGCGAGGGAGAGGGCGTCGTCCCTCGGCTGATTCCGCTGCTTCGGCACCCAGAGCGTCGCGTGCGCGGC GGTGCAGCGCAGGCGCTGGCGAATATGGGGGAGAAGGCCACGGGCGCCTTACCTGCGCTCATTGAGGCGTATGAGCGGGA GCCCGGTGGGCTGGCCCTGCACGCGCTCTCCTCACTTGATGACGAGAGAGCAGCGCCAGCCATTGTGCGCCACCTCCTGG AGTCGCCCACGTCGGCGCTGGAGCACCTCGGCCCGACATTGGCCCCGGTGCTGTTTGACGCGCTGGAGAACCCGGAGTCG AGCTGGGAGGCGCTGGTGCTGGTGCGCCACGTCCTCTCCCGGCGAGCCTCCATGCACACGGAGACCTTCGTCCCGCGCCT GCGGACGCTCCTCGCGCGGGAGCTGGAGGAGTCCACGCTGCGGCGCCCACCCGGGACGTCCTGCCCGTCGGCGCCTGCGC CAGGCTGCGAGGCGGTTTTCGACGCATGCACCCCACGAGCGGCGTACGTGGCGTCCGTGCTGGCGGCCCACGCGCGCGAA GGGGCGAAGGGCGAGCCCGAGGCGCTGCAGGCGCTACAGCGGGCGGACGTGCGCCTCACGCCCGTGGCGCTGCAGGCGCT GGTGGCCTTCAGGAGTCCTGCTGCGGTGCCGGGCGTCCTTGAGCAGCTCGCCGTGCCTGAATGCCGCGCCCGGGCCCTTG CGAGCCTCGTGTCCCTGGGGGACGTGGCGCGGCCAGCCGCGACGGAGCCGCTGCTGCGGCTGCTGGCCACGGGGAAGGAG GGCTGGGAGCGCGCACGGGCCGCAGAGGCCCTTGGACGCGTGGGAGACGCAGCCGCCTTCGAGGCGCTGCGCCAGGCGGT GGACGCGCCGCACAGCGAAGTCCAGGCCGCGGCGGTTGATGCGCTGGGCAGCTACGCCTTCCGGGAGCATGCGGAGGAGC TGGGGCCGCTGCTCCAGCGGGTGGGGACGACGCACGCCTCGCCGGTGGCGCGGAGCCACGCGAGGTTGGCCATGCAAGGC CTCGCCGAACAGGAGGTGCAGCATGCGGAGTCCATCGACTGCGCCCGCATTATTCCTGGACGTAGCGGGGGGTGGACGCT GAATGAGGGACACACCTCTGTCCAGTTGCACTGGGACAAGCCGAAGGCGCCCCCACAGGGGAGTCCCTGCGCAGCCGTGC CGGGTGGGGACTCCGCATCCGTCCTCGAAGCTATGGGGGAGGCGTGCCTCGTCGGATGGGACGACGGGGAGTTTGGGGGC ACGCTGGAAGTGCATGAAGCCGGGCGGGTGACGGTGCTGGAGGAGCCCCGGGCCAACCCCCTGGTAGTCGTGCGGATGCA CGACGCCCTCGTGGTTGTGGAGGGCCTCGCACACATGTATTTCGGGGCAGGGCGTCTGGTGCGTGTCGACGCCTCCGAGG GGCGGTGGCGTGCCACGCCTTGGGTGACTCTCCCAGGCGCGCCGATGGCATACGCACTGGATGAAGCGGGGGACTTGGTG GTGGGGACGACGGACCAGCGACTCGACGCATTCGTGTGTGGCCGGGCTGGCACCTTCGCACCCGCCCACGTGGTGCGCGT CACGAGGGACGGGCGCCTGGCCCCCGTCGAGCCGGATGGACGGCACTGA
Upstream 100 bases:
>100_bases GTCCCTTCCCAGTGAAGGGGGAATGAGAGGCGATGACATGGAGAGAGAGTTGAAGTCTGGGCGTCCCCGCTGGCTGACCG GGCTCGTGTGCGTGGCGGTG
Downstream 100 bases:
>100_bases CGCTACCGCGTGAGAAAGGGCGCCCCTCCTGGGATAGGAGGGGGCCTGTCGGGCGGGAAGGTTTCAGGCGCGCCGCGTCC GCGAGCGGAACTCGCTGGCC
Product: HEAT repeat-containing PBS lyase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 602; Mature: 602
Protein sequence:
>602_residues MLALGCSRPWKREDSRTWEGCCQGADACLALLQELHGPDTGEKWLPPEQACAAWKLGREGEGVVPRLIPLLRHPERRVRG GAAQALANMGEKATGALPALIEAYEREPGGLALHALSSLDDERAAPAIVRHLLESPTSALEHLGPTLAPVLFDALENPES SWEALVLVRHVLSRRASMHTETFVPRLRTLLARELEESTLRRPPGTSCPSAPAPGCEAVFDACTPRAAYVASVLAAHARE GAKGEPEALQALQRADVRLTPVALQALVAFRSPAAVPGVLEQLAVPECRARALASLVSLGDVARPAATEPLLRLLATGKE GWERARAAEALGRVGDAAAFEALRQAVDAPHSEVQAAAVDALGSYAFREHAEELGPLLQRVGTTHASPVARSHARLAMQG LAEQEVQHAESIDCARIIPGRSGGWTLNEGHTSVQLHWDKPKAPPQGSPCAAVPGGDSASVLEAMGEACLVGWDDGEFGG TLEVHEAGRVTVLEEPRANPLVVVRMHDALVVVEGLAHMYFGAGRLVRVDASEGRWRATPWVTLPGAPMAYALDEAGDLV VGTTDQRLDAFVCGRAGTFAPAHVVRVTRDGRLAPVEPDGRH
Sequences:
>Translated_602_residues MLALGCSRPWKREDSRTWEGCCQGADACLALLQELHGPDTGEKWLPPEQACAAWKLGREGEGVVPRLIPLLRHPERRVRG GAAQALANMGEKATGALPALIEAYEREPGGLALHALSSLDDERAAPAIVRHLLESPTSALEHLGPTLAPVLFDALENPES SWEALVLVRHVLSRRASMHTETFVPRLRTLLARELEESTLRRPPGTSCPSAPAPGCEAVFDACTPRAAYVASVLAAHARE GAKGEPEALQALQRADVRLTPVALQALVAFRSPAAVPGVLEQLAVPECRARALASLVSLGDVARPAATEPLLRLLATGKE GWERARAAEALGRVGDAAAFEALRQAVDAPHSEVQAAAVDALGSYAFREHAEELGPLLQRVGTTHASPVARSHARLAMQG LAEQEVQHAESIDCARIIPGRSGGWTLNEGHTSVQLHWDKPKAPPQGSPCAAVPGGDSASVLEAMGEACLVGWDDGEFGG TLEVHEAGRVTVLEEPRANPLVVVRMHDALVVVEGLAHMYFGAGRLVRVDASEGRWRATPWVTLPGAPMAYALDEAGDLV VGTTDQRLDAFVCGRAGTFAPAHVVRVTRDGRLAPVEPDGRH >Mature_602_residues MLALGCSRPWKREDSRTWEGCCQGADACLALLQELHGPDTGEKWLPPEQACAAWKLGREGEGVVPRLIPLLRHPERRVRG GAAQALANMGEKATGALPALIEAYEREPGGLALHALSSLDDERAAPAIVRHLLESPTSALEHLGPTLAPVLFDALENPES SWEALVLVRHVLSRRASMHTETFVPRLRTLLARELEESTLRRPPGTSCPSAPAPGCEAVFDACTPRAAYVASVLAAHARE GAKGEPEALQALQRADVRLTPVALQALVAFRSPAAVPGVLEQLAVPECRARALASLVSLGDVARPAATEPLLRLLATGKE GWERARAAEALGRVGDAAAFEALRQAVDAPHSEVQAAAVDALGSYAFREHAEELGPLLQRVGTTHASPVARSHARLAMQG LAEQEVQHAESIDCARIIPGRSGGWTLNEGHTSVQLHWDKPKAPPQGSPCAAVPGGDSASVLEAMGEACLVGWDDGEFGG TLEVHEAGRVTVLEEPRANPLVVVRMHDALVVVEGLAHMYFGAGRLVRVDASEGRWRATPWVTLPGAPMAYALDEAGDLV VGTTDQRLDAFVCGRAGTFAPAHVVRVTRDGRLAPVEPDGRH
Specific function: Unknown
COG id: COG1413
COG function: function code C; FOG: HEAT repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63957; Mature: 63957
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLALGCSRPWKREDSRTWEGCCQGADACLALLQELHGPDTGEKWLPPEQACAAWKLGREG CCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCC EGVVPRLIPLLRHPERRVRGGAAQALANMGEKATGALPALIEAYEREPGGLALHALSSLD CCCHHHHHHHHHCCHHHHCCHHHHHHHHCCCHHCCHHHHHHHHHHCCCCCEEHHHHHHCC DERAAPAIVRHLLESPTSALEHLGPTLAPVLFDALENPESSWEALVLVRHVLSRRASMHT HHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH ETFVPRLRTLLARELEESTLRRPPGTSCPSAPAPGCEAVFDACTPRAAYVASVLAAHARE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHC GAKGEPEALQALQRADVRLTPVALQALVAFRSPAAVPGVLEQLAVPECRARALASLVSLG CCCCCHHHHHHHHHCCCEEHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH DVARPAATEPLLRLLATGKEGWERARAAEALGRVGDAAAFEALRQAVDAPHSEVQAAAVD HHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHH ALGSYAFREHAEELGPLLQRVGTTHASPVARSHARLAMQGLAEQEVQHAESIDCARIIPG HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC RSGGWTLNEGHTSVQLHWDKPKAPPQGSPCAAVPGGDSASVLEAMGEACLVGWDDGEFGG CCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCC TLEVHEAGRVTVLEEPRANPLVVVRMHDALVVVEGLAHMYFGAGRLVRVDASEGRWRATP EEEEECCCCEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCEECCC WVTLPGAPMAYALDEAGDLVVGTTDQRLDAFVCGRAGTFAPAHVVRVTRDGRLAPVEPDG EEECCCCCHHHHHCCCCCEEECCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCC RH CC >Mature Secondary Structure MLALGCSRPWKREDSRTWEGCCQGADACLALLQELHGPDTGEKWLPPEQACAAWKLGREG CCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCC EGVVPRLIPLLRHPERRVRGGAAQALANMGEKATGALPALIEAYEREPGGLALHALSSLD CCCHHHHHHHHHCCHHHHCCHHHHHHHHCCCHHCCHHHHHHHHHHCCCCCEEHHHHHHCC DERAAPAIVRHLLESPTSALEHLGPTLAPVLFDALENPESSWEALVLVRHVLSRRASMHT HHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH ETFVPRLRTLLARELEESTLRRPPGTSCPSAPAPGCEAVFDACTPRAAYVASVLAAHARE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHC GAKGEPEALQALQRADVRLTPVALQALVAFRSPAAVPGVLEQLAVPECRARALASLVSLG CCCCCHHHHHHHHHCCCEEHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH DVARPAATEPLLRLLATGKEGWERARAAEALGRVGDAAAFEALRQAVDAPHSEVQAAAVD HHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHH ALGSYAFREHAEELGPLLQRVGTTHASPVARSHARLAMQGLAEQEVQHAESIDCARIIPG HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC RSGGWTLNEGHTSVQLHWDKPKAPPQGSPCAAVPGGDSASVLEAMGEACLVGWDDGEFGG CCCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCC TLEVHEAGRVTVLEEPRANPLVVVRMHDALVVVEGLAHMYFGAGRLVRVDASEGRWRATP EEEEECCCCEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCEECCC WVTLPGAPMAYALDEAGDLVVGTTDQRLDAFVCGRAGTFAPAHVVRVTRDGRLAPVEPDG EEECCCCCHHHHHCCCCCEEECCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCC RH CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA