| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is 108760505
Identifier: 108760505
GI number: 108760505
Start: 6648197
End: 6649837
Strand: Reverse
Name: 108760505
Synonym: MXAN_5340
Alternate gene names: NA
Gene position: 6649837-6648197 (Counterclockwise)
Preceding gene: 108761597
Following gene: 108759550
Centisome position: 72.76
GC content: 72.7
Gene sequence:
>1641_bases ATGTCCTCCATCGTCCTCGCCGAGCCCTCCGCACCGGTGGCGGGCGTTCTGCGCCGCTATCTCGAATCCGCCGGTCATGA AGTGTCCTGGGTGAGCAGCGTCGACGAGGCGCTGCGCACGGTGAGGGAACGAATGCCCACCGTCCTGCTGGCGTCCGGAA CGGGCGCCCTGGACGGTGAGGCGCTGTGCCGGAGCATGCGGGCCGAAGGCCTCGCCGCGCCGGTGTTGCTGTTGTATTCG CCGGACGAGGAGCAGGCAGACACGCGGGCCGCCCAGGCGGGCGCGGACGGGTGCCTGGTGGGGCCGCTGAAGCGCCCCAC GGTGTTGACGTGCGTGTCCCTGCTTGTCCAGCGCGAGGAGGCGCTGCGGCGGGTGGGTTCCGTGGGCGTACGGCCGCCGC CACCCCCGTTCGATGGGGCGTCTCACGCGGGTGGGCCCCCTCCGCTTCCGGGCGCGTTGGGCGGGCGGATGGTTCCGCCT CCTCCTCCGCCGCTCGACGGCGTGGATGCACCTGTCGAGAGTGTGGATGCGCGGGGCATGCCCCCTCCGCCGCCGCTCGA CGAAGAGGCACCGGAAGCGGAGAGCGCACAGGCGCGGGTGGTGCCACCGCCGCGCGAGGCGGAAGCGCCGTTGTCCGAGG GCCACGGCGCGAAGTCCGCGTCGCTGCCACCTGAGCTGGACGAAGAGCCCATCACGTCGCCGTCCTCCGAAGCGGGCAGC ACGGCCCCGGATGCGGGCGAGGTGCCTGCTTCGGCCACAGCGGAGATGCAGGCTTCCGAGGAAGACGACCTTCCACTGCT CCACGCGGAGCCAGAGGCCGACGAGCGGGATGCCGCCAGGACAGCGTCCGAGGACGGGCCCGAGGCCACGGAGGCCGTCG CTGCATCAGGCGCCGGTTTCGAGCCGTCGTCCGCGCAGACGTCTCCGCCCGAGGCCCCGGCGATTTGGGCGGCGAAACCC GCGGACTCGGGTGCTGTGTCGACGAGCGCGTCTGACGCCGCCACCGCGACACCAGCCGCCAGCGCTCAGCCTCCCTCGGT GGGTGCCCGGCACTCCGGCGCCTTCCCCGCGCTCGCCCCCACGCCTGTCCCAGGCGCCAGCCGCATCAGCCGGTCCGACG TGGCGGCGGTCGGCTCCTCTCCGGACTTCGAGTTCCTCAAGCGGCTGATGTTGATGGAGGTGAAGCGCAGCCGGCGCTAC CGCTACCCCATCGCCGTGTTGCTGGTGGACATCGACAAGTTCGCGGAGAAAGCCGCGCCCCTGGCCCCTGCCGCGCGGAA GCTCGCGCTCGCCGAGGCCCTGGGACTGCTGGTGTCCGGAGTGCGCGACATCGACGTCGCCGTGCCCTTCGCGGACAGTC GCTTCGTCGTCTTCCTTCCGCACACGCCGCGCTCCGGCGCGCTGGTGGTGGGGCAGCGCCTGCGCGAGCTCATCAAGTCC CTGACGGCCTACGAGGGCGCCAGCGCCTCCGTGGGTGTCGCCGTCTCCGAGCCCCCGTCGGGCCGTGGACCCGTGGCGGG CGCCCTGTCTCAGGTCAGCTTCGGCAGCCTCCTCAAAGAGGCTGGAGAAGCCCTGCGTCGCGCTCAGGCCGCGGGTGGGG ACTGGGTGGAGGCCGCGAGCGGCAGGACTCAGCCGGGATAG
Upstream 100 bases:
>100_bases ACAAGCGCATCACCGAGGTCGTGCAGAAGCAGACCGACGCGGGCATCACGCAGGTGGATGAAATCGTGAAGAAGAAGGAG AAGGAGGTCATGGAGGTTTG
Downstream 100 bases:
>100_bases ACGAAGTCCGCCCCGGTGATGCCGCGGACGACGTCCGCGACGAACGACATCAACTCCAGGCCCCGGCCCTTGTCGTCCTT CCAGGTGCCGGTGGCCGCGT
Product: response regulator/GGDEF domain-containing protein
Products: NA
Alternate protein names: Response Regulator Receiver Modulated Diguanylate Cyclase; Response Regulator/GGDEF Domain-Containing Protein
Number of amino acids: Translated: 546; Mature: 545
Protein sequence:
>546_residues MSSIVLAEPSAPVAGVLRRYLESAGHEVSWVSSVDEALRTVRERMPTVLLASGTGALDGEALCRSMRAEGLAAPVLLLYS PDEEQADTRAAQAGADGCLVGPLKRPTVLTCVSLLVQREEALRRVGSVGVRPPPPPFDGASHAGGPPPLPGALGGRMVPP PPPPLDGVDAPVESVDARGMPPPPPLDEEAPEAESAQARVVPPPREAEAPLSEGHGAKSASLPPELDEEPITSPSSEAGS TAPDAGEVPASATAEMQASEEDDLPLLHAEPEADERDAARTASEDGPEATEAVAASGAGFEPSSAQTSPPEAPAIWAAKP ADSGAVSTSASDAATATPAASAQPPSVGARHSGAFPALAPTPVPGASRISRSDVAAVGSSPDFEFLKRLMLMEVKRSRRY RYPIAVLLVDIDKFAEKAAPLAPAARKLALAEALGLLVSGVRDIDVAVPFADSRFVVFLPHTPRSGALVVGQRLRELIKS LTAYEGASASVGVAVSEPPSGRGPVAGALSQVSFGSLLKEAGEALRRAQAAGGDWVEAASGRTQPG
Sequences:
>Translated_546_residues MSSIVLAEPSAPVAGVLRRYLESAGHEVSWVSSVDEALRTVRERMPTVLLASGTGALDGEALCRSMRAEGLAAPVLLLYS PDEEQADTRAAQAGADGCLVGPLKRPTVLTCVSLLVQREEALRRVGSVGVRPPPPPFDGASHAGGPPPLPGALGGRMVPP PPPPLDGVDAPVESVDARGMPPPPPLDEEAPEAESAQARVVPPPREAEAPLSEGHGAKSASLPPELDEEPITSPSSEAGS TAPDAGEVPASATAEMQASEEDDLPLLHAEPEADERDAARTASEDGPEATEAVAASGAGFEPSSAQTSPPEAPAIWAAKP ADSGAVSTSASDAATATPAASAQPPSVGARHSGAFPALAPTPVPGASRISRSDVAAVGSSPDFEFLKRLMLMEVKRSRRY RYPIAVLLVDIDKFAEKAAPLAPAARKLALAEALGLLVSGVRDIDVAVPFADSRFVVFLPHTPRSGALVVGQRLRELIKS LTAYEGASASVGVAVSEPPSGRGPVAGALSQVSFGSLLKEAGEALRRAQAAGGDWVEAASGRTQPG >Mature_545_residues SSIVLAEPSAPVAGVLRRYLESAGHEVSWVSSVDEALRTVRERMPTVLLASGTGALDGEALCRSMRAEGLAAPVLLLYSP DEEQADTRAAQAGADGCLVGPLKRPTVLTCVSLLVQREEALRRVGSVGVRPPPPPFDGASHAGGPPPLPGALGGRMVPPP PPPLDGVDAPVESVDARGMPPPPPLDEEAPEAESAQARVVPPPREAEAPLSEGHGAKSASLPPELDEEPITSPSSEAGST APDAGEVPASATAEMQASEEDDLPLLHAEPEADERDAARTASEDGPEATEAVAASGAGFEPSSAQTSPPEAPAIWAAKPA DSGAVSTSASDAATATPAASAQPPSVGARHSGAFPALAPTPVPGASRISRSDVAAVGSSPDFEFLKRLMLMEVKRSRRYR YPIAVLLVDIDKFAEKAAPLAPAARKLALAEALGLLVSGVRDIDVAVPFADSRFVVFLPHTPRSGALVVGQRLRELIKSL TAYEGASASVGVAVSEPPSGRGPVAGALSQVSFGSLLKEAGEALRRAQAAGGDWVEAASGRTQPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55686; Mature: 55555
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50887 GGDEF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIVLAEPSAPVAGVLRRYLESAGHEVSWVSSVDEALRTVRERMPTVLLASGTGALDGE CCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHH ALCRSMRAEGLAAPVLLLYSPDEEQADTRAAQAGADGCLVGPLKRPTVLTCVSLLVQREE HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHH ALRRVGSVGVRPPPPPFDGASHAGGPPPLPGALGGRMVPPPPPPLDGVDAPVESVDARGM HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHCCCCC PPPPPLDEEAPEAESAQARVVPPPREAEAPLSEGHGAKSASLPPELDEEPITSPSSEAGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC TAPDAGEVPASATAEMQASEEDDLPLLHAEPEADERDAARTASEDGPEATEAVAASGAGF CCCCCCCCCCCCHHHHCCCCCCCCCEEECCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCC EPSSAQTSPPEAPAIWAAKPADSGAVSTSASDAATATPAASAQPPSVGARHSGAFPALAP CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPVPGASRISRSDVAAVGSSPDFEFLKRLMLMEVKRSRRYRYPIAVLLVDIDKFAEKAAP CCCCCHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHCC LAPAARKLALAEALGLLVSGVRDIDVAVPFADSRFVVFLPHTPRSGALVVGQRLRELIKS CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHH LTAYEGASASVGVAVSEPPSGRGPVAGALSQVSFGSLLKEAGEALRRAQAAGGDWVEAAS HHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC GRTQPG CCCCCC >Mature Secondary Structure SSIVLAEPSAPVAGVLRRYLESAGHEVSWVSSVDEALRTVRERMPTVLLASGTGALDGE CCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHH ALCRSMRAEGLAAPVLLLYSPDEEQADTRAAQAGADGCLVGPLKRPTVLTCVSLLVQREE HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHH ALRRVGSVGVRPPPPPFDGASHAGGPPPLPGALGGRMVPPPPPPLDGVDAPVESVDARGM HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHCCCCC PPPPPLDEEAPEAESAQARVVPPPREAEAPLSEGHGAKSASLPPELDEEPITSPSSEAGS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC TAPDAGEVPASATAEMQASEEDDLPLLHAEPEADERDAARTASEDGPEATEAVAASGAGF CCCCCCCCCCCCHHHHCCCCCCCCCEEECCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCC EPSSAQTSPPEAPAIWAAKPADSGAVSTSASDAATATPAASAQPPSVGARHSGAFPALAP CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TPVPGASRISRSDVAAVGSSPDFEFLKRLMLMEVKRSRRYRYPIAVLLVDIDKFAEKAAP CCCCCHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHCC LAPAARKLALAEALGLLVSGVRDIDVAVPFADSRFVVFLPHTPRSGALVVGQRLRELIKS CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHH LTAYEGASASVGVAVSEPPSGRGPVAGALSQVSFGSLLKEAGEALRRAQAAGGDWVEAAS HHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC GRTQPG CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA