Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is 108760505

Identifier: 108760505

GI number: 108760505

Start: 6648197

End: 6649837

Strand: Reverse

Name: 108760505

Synonym: MXAN_5340

Alternate gene names: NA

Gene position: 6649837-6648197 (Counterclockwise)

Preceding gene: 108761597

Following gene: 108759550

Centisome position: 72.76

GC content: 72.7

Gene sequence:

>1641_bases
ATGTCCTCCATCGTCCTCGCCGAGCCCTCCGCACCGGTGGCGGGCGTTCTGCGCCGCTATCTCGAATCCGCCGGTCATGA
AGTGTCCTGGGTGAGCAGCGTCGACGAGGCGCTGCGCACGGTGAGGGAACGAATGCCCACCGTCCTGCTGGCGTCCGGAA
CGGGCGCCCTGGACGGTGAGGCGCTGTGCCGGAGCATGCGGGCCGAAGGCCTCGCCGCGCCGGTGTTGCTGTTGTATTCG
CCGGACGAGGAGCAGGCAGACACGCGGGCCGCCCAGGCGGGCGCGGACGGGTGCCTGGTGGGGCCGCTGAAGCGCCCCAC
GGTGTTGACGTGCGTGTCCCTGCTTGTCCAGCGCGAGGAGGCGCTGCGGCGGGTGGGTTCCGTGGGCGTACGGCCGCCGC
CACCCCCGTTCGATGGGGCGTCTCACGCGGGTGGGCCCCCTCCGCTTCCGGGCGCGTTGGGCGGGCGGATGGTTCCGCCT
CCTCCTCCGCCGCTCGACGGCGTGGATGCACCTGTCGAGAGTGTGGATGCGCGGGGCATGCCCCCTCCGCCGCCGCTCGA
CGAAGAGGCACCGGAAGCGGAGAGCGCACAGGCGCGGGTGGTGCCACCGCCGCGCGAGGCGGAAGCGCCGTTGTCCGAGG
GCCACGGCGCGAAGTCCGCGTCGCTGCCACCTGAGCTGGACGAAGAGCCCATCACGTCGCCGTCCTCCGAAGCGGGCAGC
ACGGCCCCGGATGCGGGCGAGGTGCCTGCTTCGGCCACAGCGGAGATGCAGGCTTCCGAGGAAGACGACCTTCCACTGCT
CCACGCGGAGCCAGAGGCCGACGAGCGGGATGCCGCCAGGACAGCGTCCGAGGACGGGCCCGAGGCCACGGAGGCCGTCG
CTGCATCAGGCGCCGGTTTCGAGCCGTCGTCCGCGCAGACGTCTCCGCCCGAGGCCCCGGCGATTTGGGCGGCGAAACCC
GCGGACTCGGGTGCTGTGTCGACGAGCGCGTCTGACGCCGCCACCGCGACACCAGCCGCCAGCGCTCAGCCTCCCTCGGT
GGGTGCCCGGCACTCCGGCGCCTTCCCCGCGCTCGCCCCCACGCCTGTCCCAGGCGCCAGCCGCATCAGCCGGTCCGACG
TGGCGGCGGTCGGCTCCTCTCCGGACTTCGAGTTCCTCAAGCGGCTGATGTTGATGGAGGTGAAGCGCAGCCGGCGCTAC
CGCTACCCCATCGCCGTGTTGCTGGTGGACATCGACAAGTTCGCGGAGAAAGCCGCGCCCCTGGCCCCTGCCGCGCGGAA
GCTCGCGCTCGCCGAGGCCCTGGGACTGCTGGTGTCCGGAGTGCGCGACATCGACGTCGCCGTGCCCTTCGCGGACAGTC
GCTTCGTCGTCTTCCTTCCGCACACGCCGCGCTCCGGCGCGCTGGTGGTGGGGCAGCGCCTGCGCGAGCTCATCAAGTCC
CTGACGGCCTACGAGGGCGCCAGCGCCTCCGTGGGTGTCGCCGTCTCCGAGCCCCCGTCGGGCCGTGGACCCGTGGCGGG
CGCCCTGTCTCAGGTCAGCTTCGGCAGCCTCCTCAAAGAGGCTGGAGAAGCCCTGCGTCGCGCTCAGGCCGCGGGTGGGG
ACTGGGTGGAGGCCGCGAGCGGCAGGACTCAGCCGGGATAG

Upstream 100 bases:

>100_bases
ACAAGCGCATCACCGAGGTCGTGCAGAAGCAGACCGACGCGGGCATCACGCAGGTGGATGAAATCGTGAAGAAGAAGGAG
AAGGAGGTCATGGAGGTTTG

Downstream 100 bases:

>100_bases
ACGAAGTCCGCCCCGGTGATGCCGCGGACGACGTCCGCGACGAACGACATCAACTCCAGGCCCCGGCCCTTGTCGTCCTT
CCAGGTGCCGGTGGCCGCGT

Product: response regulator/GGDEF domain-containing protein

Products: NA

Alternate protein names: Response Regulator Receiver Modulated Diguanylate Cyclase; Response Regulator/GGDEF Domain-Containing Protein

Number of amino acids: Translated: 546; Mature: 545

Protein sequence:

>546_residues
MSSIVLAEPSAPVAGVLRRYLESAGHEVSWVSSVDEALRTVRERMPTVLLASGTGALDGEALCRSMRAEGLAAPVLLLYS
PDEEQADTRAAQAGADGCLVGPLKRPTVLTCVSLLVQREEALRRVGSVGVRPPPPPFDGASHAGGPPPLPGALGGRMVPP
PPPPLDGVDAPVESVDARGMPPPPPLDEEAPEAESAQARVVPPPREAEAPLSEGHGAKSASLPPELDEEPITSPSSEAGS
TAPDAGEVPASATAEMQASEEDDLPLLHAEPEADERDAARTASEDGPEATEAVAASGAGFEPSSAQTSPPEAPAIWAAKP
ADSGAVSTSASDAATATPAASAQPPSVGARHSGAFPALAPTPVPGASRISRSDVAAVGSSPDFEFLKRLMLMEVKRSRRY
RYPIAVLLVDIDKFAEKAAPLAPAARKLALAEALGLLVSGVRDIDVAVPFADSRFVVFLPHTPRSGALVVGQRLRELIKS
LTAYEGASASVGVAVSEPPSGRGPVAGALSQVSFGSLLKEAGEALRRAQAAGGDWVEAASGRTQPG

Sequences:

>Translated_546_residues
MSSIVLAEPSAPVAGVLRRYLESAGHEVSWVSSVDEALRTVRERMPTVLLASGTGALDGEALCRSMRAEGLAAPVLLLYS
PDEEQADTRAAQAGADGCLVGPLKRPTVLTCVSLLVQREEALRRVGSVGVRPPPPPFDGASHAGGPPPLPGALGGRMVPP
PPPPLDGVDAPVESVDARGMPPPPPLDEEAPEAESAQARVVPPPREAEAPLSEGHGAKSASLPPELDEEPITSPSSEAGS
TAPDAGEVPASATAEMQASEEDDLPLLHAEPEADERDAARTASEDGPEATEAVAASGAGFEPSSAQTSPPEAPAIWAAKP
ADSGAVSTSASDAATATPAASAQPPSVGARHSGAFPALAPTPVPGASRISRSDVAAVGSSPDFEFLKRLMLMEVKRSRRY
RYPIAVLLVDIDKFAEKAAPLAPAARKLALAEALGLLVSGVRDIDVAVPFADSRFVVFLPHTPRSGALVVGQRLRELIKS
LTAYEGASASVGVAVSEPPSGRGPVAGALSQVSFGSLLKEAGEALRRAQAAGGDWVEAASGRTQPG
>Mature_545_residues
SSIVLAEPSAPVAGVLRRYLESAGHEVSWVSSVDEALRTVRERMPTVLLASGTGALDGEALCRSMRAEGLAAPVLLLYSP
DEEQADTRAAQAGADGCLVGPLKRPTVLTCVSLLVQREEALRRVGSVGVRPPPPPFDGASHAGGPPPLPGALGGRMVPPP
PPPLDGVDAPVESVDARGMPPPPPLDEEAPEAESAQARVVPPPREAEAPLSEGHGAKSASLPPELDEEPITSPSSEAGST
APDAGEVPASATAEMQASEEDDLPLLHAEPEADERDAARTASEDGPEATEAVAASGAGFEPSSAQTSPPEAPAIWAAKPA
DSGAVSTSASDAATATPAASAQPPSVGARHSGAFPALAPTPVPGASRISRSDVAAVGSSPDFEFLKRLMLMEVKRSRRYR
YPIAVLLVDIDKFAEKAAPLAPAARKLALAEALGLLVSGVRDIDVAVPFADSRFVVFLPHTPRSGALVVGQRLRELIKSL
TAYEGASASVGVAVSEPPSGRGPVAGALSQVSFGSLLKEAGEALRRAQAAGGDWVEAASGRTQPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55686; Mature: 55555

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSIVLAEPSAPVAGVLRRYLESAGHEVSWVSSVDEALRTVRERMPTVLLASGTGALDGE
CCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHH
ALCRSMRAEGLAAPVLLLYSPDEEQADTRAAQAGADGCLVGPLKRPTVLTCVSLLVQREE
HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHH
ALRRVGSVGVRPPPPPFDGASHAGGPPPLPGALGGRMVPPPPPPLDGVDAPVESVDARGM
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHCCCCC
PPPPPLDEEAPEAESAQARVVPPPREAEAPLSEGHGAKSASLPPELDEEPITSPSSEAGS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
TAPDAGEVPASATAEMQASEEDDLPLLHAEPEADERDAARTASEDGPEATEAVAASGAGF
CCCCCCCCCCCCHHHHCCCCCCCCCEEECCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCC
EPSSAQTSPPEAPAIWAAKPADSGAVSTSASDAATATPAASAQPPSVGARHSGAFPALAP
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TPVPGASRISRSDVAAVGSSPDFEFLKRLMLMEVKRSRRYRYPIAVLLVDIDKFAEKAAP
CCCCCHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHCC
LAPAARKLALAEALGLLVSGVRDIDVAVPFADSRFVVFLPHTPRSGALVVGQRLRELIKS
CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
LTAYEGASASVGVAVSEPPSGRGPVAGALSQVSFGSLLKEAGEALRRAQAAGGDWVEAAS
HHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
GRTQPG
CCCCCC
>Mature Secondary Structure 
SSIVLAEPSAPVAGVLRRYLESAGHEVSWVSSVDEALRTVRERMPTVLLASGTGALDGE
CCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHH
ALCRSMRAEGLAAPVLLLYSPDEEQADTRAAQAGADGCLVGPLKRPTVLTCVSLLVQREE
HHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHH
ALRRVGSVGVRPPPPPFDGASHAGGPPPLPGALGGRMVPPPPPPLDGVDAPVESVDARGM
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCHHHHCCCCC
PPPPPLDEEAPEAESAQARVVPPPREAEAPLSEGHGAKSASLPPELDEEPITSPSSEAGS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
TAPDAGEVPASATAEMQASEEDDLPLLHAEPEADERDAARTASEDGPEATEAVAASGAGF
CCCCCCCCCCCCHHHHCCCCCCCCCEEECCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCC
EPSSAQTSPPEAPAIWAAKPADSGAVSTSASDAATATPAASAQPPSVGARHSGAFPALAP
CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TPVPGASRISRSDVAAVGSSPDFEFLKRLMLMEVKRSRRYRYPIAVLLVDIDKFAEKAAP
CCCCCHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHCC
LAPAARKLALAEALGLLVSGVRDIDVAVPFADSRFVVFLPHTPRSGALVVGQRLRELIKS
CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHH
LTAYEGASASVGVAVSEPPSGRGPVAGALSQVSFGSLLKEAGEALRRAQAAGGDWVEAAS
HHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC
GRTQPG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA