| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760446
Identifier: 108760446
GI number: 108760446
Start: 1927193
End: 1928614
Strand: Direct
Name: 108760446
Synonym: MXAN_1624
Alternate gene names: NA
Gene position: 1927193-1928614 (Clockwise)
Preceding gene: 108761944
Following gene: 108757427
Centisome position: 21.09
GC content: 68.28
Gene sequence:
>1422_bases ATGACCACGCACTCAATTCGCACCCGCCTTGTCGCGCCCGCGCTGATGGTGCTCGGGATGCTGTCCACGCCTGCCTTCGC GGCCGCTCCCGCCTCGGCGCCCACCAAGGAAGCGCCTCCGGCCGCCGCCGCGCCCAAGCCCTTCAAAGTCCCCGTCCGCA CGGAGTTCACGCTCGACAACGGGCTGGAAGTCTCGCTGCTGCCCTACGGCGACATGCCGAAGGTCGCCATCCAACTGGCC ATCGACACCGGCAACATCCACGAGAAGGCCACGGAGACGTGGCTGGCGGACCTGACGGGAAAGCTGCTGTCGGAGGGCAC CACCACCCGTTCCGCGGAGCAGCTTGCCCAGGCGGCCGCGCAGCTGGGTGGTTCGCTCAACATCGGCACGACGATGGACC AGACCTATGTCGGTCTGGAGGTCCTCTCCGAGTCGGCGCCGGACGCCGTGGCCCTCATCGCGGACGTCATCCAGAACCCG GCCTTCCCGCCGGCGGAGGTCGAGCGCGTCAAGGGCGACCTCGTGCGGGAGATGGCCATCTACAAGAGCCGGCCGGGTAC GCTCGCCGACGAGCGGCTGCTCCAGTCGCTCTACGGTGACCACCCGTATGGCCGCTACTTCCCGCCGGAGGCCCAGCTCA AGGGCTACACGCCGGAGGCCGTCCGCGCGCACTACGACGCCAACATCGGCGCGGCCCGGGCGCGGCTGTACGTCGTCGGC CGGTTCGAGCCGGCGCCGGTGGAAAAGGCCATCCGGGACGCGTTCACCGGCTGGAAGGCCGGCGCGGCGCGCCTCCGGAA CGTGCCCAAGCAGAAGGTGGCGAAGGCGGTCCAGTTCATCGACCGCCCCGGCTCGGTGCAGTCCACGGTGCGCGTGGCGG TGAAGGGCCTGCCGCCCTCCAGCCCGGACTACGTCAAGCAGACGGTGATGAACACGCTGCTCGGTGGCTACTTCAGCTCG CGCATCACCGCGAACATCCGCGAGGCGAAGGGCTACACGTATTCGCCCTACAGCGATGTGTCCACGCACCTGGAGGACGC CTACTGGGTGCAGAACGCGGACGTGACGACGGCCGTCACGGGCGAGTCGCTGAAGGAGATCCTCAAGGAGGTGGCCACCC TGCGCAAGACGCCGCCGCCCGCGGACGAGCTGAGCGCTGTCCAGAGCTATCTGGCGGGCTCCTTCCTGCTCCAGAACTCG TCGCGCAGCGGCATCATCTACCAGCTCCGCTTCGTGGACCTGCACGGCCTGCCTGATTCGTATCTGCAGAACTACGTGCA GTCGGTGATGGCCGTCACGCCGGAGCAGGTGCAGCAGCTGGCCGCGAAGATGCTGACGCGTGAGGCGATGACCTTCATCG TCGTGGGCGACCAGAAGTTGGTGGCGCCGCAGCTGAAGGTCGTATCCCCCGCGCTGAAGTGA
Upstream 100 bases:
>100_bases GGCGAAGGAGTATCTGCGCCGTGAGAACCGCACCGTGTTGACGGTGACGCCCGCCACGGCGCCCGCCACCAAGACGCAGG CCCCCTGAGGACACGCACCC
Downstream 100 bases:
>100_bases GTCCTGGGAGGGCGGAGGCCACACCTGGGCCTCCGCCTTCCTCCCACGGTGTCCCTACTCGGGGCGGGCTGTGACGCCGT CCGGGTAGAGCGACTCGGGG
Product: M16 family peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MTTHSIRTRLVAPALMVLGMLSTPAFAAAPASAPTKEAPPAAAAPKPFKVPVRTEFTLDNGLEVSLLPYGDMPKVAIQLA IDTGNIHEKATETWLADLTGKLLSEGTTTRSAEQLAQAAAQLGGSLNIGTTMDQTYVGLEVLSESAPDAVALIADVIQNP AFPPAEVERVKGDLVREMAIYKSRPGTLADERLLQSLYGDHPYGRYFPPEAQLKGYTPEAVRAHYDANIGAARARLYVVG RFEPAPVEKAIRDAFTGWKAGAARLRNVPKQKVAKAVQFIDRPGSVQSTVRVAVKGLPPSSPDYVKQTVMNTLLGGYFSS RITANIREAKGYTYSPYSDVSTHLEDAYWVQNADVTTAVTGESLKEILKEVATLRKTPPPADELSAVQSYLAGSFLLQNS SRSGIIYQLRFVDLHGLPDSYLQNYVQSVMAVTPEQVQQLAAKMLTREAMTFIVVGDQKLVAPQLKVVSPALK
Sequences:
>Translated_473_residues MTTHSIRTRLVAPALMVLGMLSTPAFAAAPASAPTKEAPPAAAAPKPFKVPVRTEFTLDNGLEVSLLPYGDMPKVAIQLA IDTGNIHEKATETWLADLTGKLLSEGTTTRSAEQLAQAAAQLGGSLNIGTTMDQTYVGLEVLSESAPDAVALIADVIQNP AFPPAEVERVKGDLVREMAIYKSRPGTLADERLLQSLYGDHPYGRYFPPEAQLKGYTPEAVRAHYDANIGAARARLYVVG RFEPAPVEKAIRDAFTGWKAGAARLRNVPKQKVAKAVQFIDRPGSVQSTVRVAVKGLPPSSPDYVKQTVMNTLLGGYFSS RITANIREAKGYTYSPYSDVSTHLEDAYWVQNADVTTAVTGESLKEILKEVATLRKTPPPADELSAVQSYLAGSFLLQNS SRSGIIYQLRFVDLHGLPDSYLQNYVQSVMAVTPEQVQQLAAKMLTREAMTFIVVGDQKLVAPQLKVVSPALK >Mature_472_residues TTHSIRTRLVAPALMVLGMLSTPAFAAAPASAPTKEAPPAAAAPKPFKVPVRTEFTLDNGLEVSLLPYGDMPKVAIQLAI DTGNIHEKATETWLADLTGKLLSEGTTTRSAEQLAQAAAQLGGSLNIGTTMDQTYVGLEVLSESAPDAVALIADVIQNPA FPPAEVERVKGDLVREMAIYKSRPGTLADERLLQSLYGDHPYGRYFPPEAQLKGYTPEAVRAHYDANIGAARARLYVVGR FEPAPVEKAIRDAFTGWKAGAARLRNVPKQKVAKAVQFIDRPGSVQSTVRVAVKGLPPSSPDYVKQTVMNTLLGGYFSSR ITANIREAKGYTYSPYSDVSTHLEDAYWVQNADVTTAVTGESLKEILKEVATLRKTPPPADELSAVQSYLAGSFLLQNSS RSGIIYQLRFVDLHGLPDSYLQNYVQSVMAVTPEQVQQLAAKMLTREAMTFIVVGDQKLVAPQLKVVSPALK
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Drosophila melanogaster, GI21357875, Length=275, Percent_Identity=25.0909090909091, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI24646943, Length=275, Percent_Identity=25.0909090909091, Blast_Score=72, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR007863 [H]
Pfam domain/function: PF05193 Peptidase_M16_C [H]
EC number: NA
Molecular weight: Translated: 51095; Mature: 50964
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHSIRTRLVAPALMVLGMLSTPAFAAAPASAPTKEAPPAAAAPKPFKVPVRTEFTLDN CCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC GLEVSLLPYGDMPKVAIQLAIDTGNIHEKATETWLADLTGKLLSEGTTTRSAEQLAQAAA CCEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH QLGGSLNIGTTMDQTYVGLEVLSESAPDAVALIADVIQNPAFPPAEVERVKGDLVREMAI HCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH YKSRPGTLADERLLQSLYGDHPYGRYFPPEAQLKGYTPEAVRAHYDANIGAARARLYVVG HHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEE RFEPAPVEKAIRDAFTGWKAGAARLRNVPKQKVAKAVQFIDRPGSVQSTVRVAVKGLPPS CCCCCCHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHEECCCCC SPDYVKQTVMNTLLGGYFSSRITANIREAKGYTYSPYSDVSTHLEDAYWVQNADVTTAVT CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEECCCCEEEEC GESLKEILKEVATLRKTPPPADELSAVQSYLAGSFLLQNSSRSGIIYQLRFVDLHGLPDS HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEEEECCCCHH YLQNYVQSVMAVTPEQVQQLAAKMLTREAMTFIVVGDQKLVAPQLKVVSPALK HHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEEECCCHHCCCHHHHHCCCCC >Mature Secondary Structure TTHSIRTRLVAPALMVLGMLSTPAFAAAPASAPTKEAPPAAAAPKPFKVPVRTEFTLDN CCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECC GLEVSLLPYGDMPKVAIQLAIDTGNIHEKATETWLADLTGKLLSEGTTTRSAEQLAQAAA CCEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH QLGGSLNIGTTMDQTYVGLEVLSESAPDAVALIADVIQNPAFPPAEVERVKGDLVREMAI HCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH YKSRPGTLADERLLQSLYGDHPYGRYFPPEAQLKGYTPEAVRAHYDANIGAARARLYVVG HHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEEEEE RFEPAPVEKAIRDAFTGWKAGAARLRNVPKQKVAKAVQFIDRPGSVQSTVRVAVKGLPPS CCCCCCHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHEECCCCC SPDYVKQTVMNTLLGGYFSSRITANIREAKGYTYSPYSDVSTHLEDAYWVQNADVTTAVT CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEECCCCEEEEC GESLKEILKEVATLRKTPPPADELSAVQSYLAGSFLLQNSSRSGIIYQLRFVDLHGLPDS HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEEEECCCCHH YLQNYVQSVMAVTPEQVQQLAAKMLTREAMTFIVVGDQKLVAPQLKVVSPALK HHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEEECCCHHCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]