| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is adhB [H]
Identifier: 108760445
GI number: 108760445
Start: 1911615
End: 1912589
Strand: Direct
Name: adhB [H]
Synonym: MXAN_1611
Alternate gene names: 108760445
Gene position: 1911615-1912589 (Clockwise)
Preceding gene: 108761575
Following gene: 108757270
Centisome position: 20.92
GC content: 72.31
Gene sequence:
>975_bases ATGCGCTCCCATCTCCTGTTCCTGCTGCTGGCGCTGAGCGCCTGTCAGCGCAACGAATCGCCGCCGCCACCCGCGAAGGC TCCGGCCGCATCCGCGCCGTCGCCTCGTGCTCCCGCCGTCCCGGCCGTCACCGCGTCCGCGGACGCGGCGAAGCTGGAGC GGGGCCGGTACCTCGTGGAGAACGTGCTCGCCTGTGGCTCCTGCCACACGCCGCGCGACTGGGCTCGGTATGGAGGCCCC GCCTCCGGGCCCGCGCTCTCCGGCGCCTGCTGGGATGACGCGGCCTGGGAGCTGCCCGGTCGCGTCTGCGCGCCCAACAT CACCTCCGATCCCGAGCACGGCATCGGCCGCTGGACGGATGAGGAGCTGATGCGCGCGCTGCGCGACGGCACCGGGCGCG ATGGGAAGACGCTCTTCCCACTCATGCCGTTCCTCCTCTACCGCGAGCTGTCGGACGCGGACGCCCATGCCGTGATTGCC TGGCTGCGTCAGGCCCCGGCCACCCCGCGCGCTTCGGCCCGCTCGGTCATCCCGGACGAGGTGTACGCGCAGTACAAGGA CATGGCCGCGCCCATGAAGACGGCCGTGCCGGAGCCCGCCGCAGATGACGTCTCTCGCGGTCGCTACCTGGCCACCATGG CGCAGTGCGCCGCGTGTCACGCGGGCATGGACGAGGCGGGCACGCCCTTCGTGGGAGGACGTCCGCTGCCCACGCCGCAC GGCCCGGAAGTCGTATCCAATCTCACGCCGCATGCACACGGACTGGGCGCCGTGGACGAAGCAGCCTTCGTCGCCCGCTT CACCGCCTTCAAGGACCTGGCACCCGCGCCCGCGCGGGCGGGCCAGGTGAACAAGCTCACCATGCCCTGGGGTTTCTTCG CCGGACTGGCGGAGGCGGACCTCAAGGCCCTCTACCGTTACCTGCGCACGGTGCCCGCCGTGGCCCCCGCCGCGCCGTCC GCGTCTGGCAAATGA
Upstream 100 bases:
>100_bases CCGCGGACCGCCTGCCCATCGAATACCGCCGGGGTGTCATCGCCCTGCGGCTGGGCAAGCCCGTGGACGGACCCGCCCCG GAATGAGGACCCACACCCCC
Downstream 100 bases:
>100_bases CCCATTCTGGCGCCACCTGGGAGCGTCCGGTAGACTCCCAGCGCGTCCCCTGAAAGCCCATCGTTGCGCGCCCTTCCCCC AGGGGCGCGCGTGACGCGTG
Product: cytochrome c family protein
Products: NA
Alternate protein names: Cytochrome c-553; Cytochrome c553; G3-ADH subunit II [H]
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MRSHLLFLLLALSACQRNESPPPPAKAPAASAPSPRAPAVPAVTASADAAKLERGRYLVENVLACGSCHTPRDWARYGGP ASGPALSGACWDDAAWELPGRVCAPNITSDPEHGIGRWTDEELMRALRDGTGRDGKTLFPLMPFLLYRELSDADAHAVIA WLRQAPATPRASARSVIPDEVYAQYKDMAAPMKTAVPEPAADDVSRGRYLATMAQCAACHAGMDEAGTPFVGGRPLPTPH GPEVVSNLTPHAHGLGAVDEAAFVARFTAFKDLAPAPARAGQVNKLTMPWGFFAGLAEADLKALYRYLRTVPAVAPAAPS ASGK
Sequences:
>Translated_324_residues MRSHLLFLLLALSACQRNESPPPPAKAPAASAPSPRAPAVPAVTASADAAKLERGRYLVENVLACGSCHTPRDWARYGGP ASGPALSGACWDDAAWELPGRVCAPNITSDPEHGIGRWTDEELMRALRDGTGRDGKTLFPLMPFLLYRELSDADAHAVIA WLRQAPATPRASARSVIPDEVYAQYKDMAAPMKTAVPEPAADDVSRGRYLATMAQCAACHAGMDEAGTPFVGGRPLPTPH GPEVVSNLTPHAHGLGAVDEAAFVARFTAFKDLAPAPARAGQVNKLTMPWGFFAGLAEADLKALYRYLRTVPAVAPAAPS ASGK >Mature_324_residues MRSHLLFLLLALSACQRNESPPPPAKAPAASAPSPRAPAVPAVTASADAAKLERGRYLVENVLACGSCHTPRDWARYGGP ASGPALSGACWDDAAWELPGRVCAPNITSDPEHGIGRWTDEELMRALRDGTGRDGKTLFPLMPFLLYRELSDADAHAVIA WLRQAPATPRASARSVIPDEVYAQYKDMAAPMKTAVPEPAADDVSRGRYLATMAQCAACHAGMDEAGTPFVGGRPLPTPH GPEVVSNLTPHAHGLGAVDEAAFVARFTAFKDLAPAPARAGQVNKLTMPWGFFAGLAEADLKALYRYLRTVPAVAPAAPS ASGK
Specific function: Dehydration of primary alcohols (exception:methanol) [H]
COG id: COG2010
COG function: function code C; Cytochrome c, mono- and diheme variants
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Periplasmic side (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 cytochrome c domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR003088 - InterPro: IPR008168 - InterPro: IPR014353 [H]
Pfam domain/function: PF00034 Cytochrom_C [H]
EC number: NA
Molecular weight: Translated: 34161; Mature: 34161
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSHLLFLLLALSACQRNESPPPPAKAPAASAPSPRAPAVPAVTASADAAKLERGRYLVE CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHH NVLACGSCHTPRDWARYGGPASGPALSGACWDDAAWELPGRVCAPNITSDPEHGIGRWTD HHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCEECCCCCCCCCCCCCCCCH EELMRALRDGTGRDGKTLFPLMPFLLYRELSDADAHAVIAWLRQAPATPRASARSVIPDE HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHCCCHHH VYAQYKDMAAPMKTAVPEPAADDVSRGRYLATMAQCAACHAGMDEAGTPFVGGRPLPTPH HHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC GPEVVSNLTPHAHGLGAVDEAAFVARFTAFKDLAPAPARAGQVNKLTMPWGFFAGLAEAD CHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHH LKALYRYLRTVPAVAPAAPSASGK HHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MRSHLLFLLLALSACQRNESPPPPAKAPAASAPSPRAPAVPAVTASADAAKLERGRYLVE CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHH NVLACGSCHTPRDWARYGGPASGPALSGACWDDAAWELPGRVCAPNITSDPEHGIGRWTD HHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCEECCCCCCCCCCCCCCCCH EELMRALRDGTGRDGKTLFPLMPFLLYRELSDADAHAVIAWLRQAPATPRASARSVIPDE HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHCCCHHH VYAQYKDMAAPMKTAVPEPAADDVSRGRYLATMAQCAACHAGMDEAGTPFVGGRPLPTPH HHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC GPEVVSNLTPHAHGLGAVDEAAFVARFTAFKDLAPAPARAGQVNKLTMPWGFFAGLAEAD CHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHH LKALYRYLRTVPAVAPAAPSASGK HHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9055427 [H]