| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760197
Identifier: 108760197
GI number: 108760197
Start: 1271335
End: 1272177
Strand: Reverse
Name: 108760197
Synonym: MXAN_1090
Alternate gene names: NA
Gene position: 1272177-1271335 (Counterclockwise)
Preceding gene: 108763279
Following gene: 108760187
Centisome position: 13.92
GC content: 68.92
Gene sequence:
>843_bases ATGGCCTCTCCTTCCCGGAATCGCATTGGCGACATCCTCGTCAAGGCACGCGTCATCGACGACTTGCAGCTGCGCAGTGC ACTGGCCACCCATGACCAGTGGGGCGGACGTCTGTCGCGCATCATCGCGGACCTGGGTCTGGCCACCGACGACGTCATCA CCGAGGCCATCTGCCAGGGCCTGGGAATGCAGCGCATCCAGTTGGGCAACGTCACGCGCGACGCGGGCGCGCTCTCACGC GTCGACGTGAGCCTCGCCGAACAGAAGGCCGTCTTCCCGGTGTCGCTCAAGGACAACGGCAAGACGCTGGTGCTGGCCAT GGCGGACCCCACGGACCTCGTCACCCTGGACCAGGTGGCGGCGAAGAGCCGCGCCCGCGTGGTCGTTATGGTGGCGGGCG AGCGTGAAATCGAACACGCCATCCTCCGCCACTACCGTGGCCAGGAGCCCGTCGTCAGCACGCGCTTCGGCGGCAACAAG CGCCCGAGCAGCTCGGACGCGCCGGAGGACGAGGACGAGTTCAAGGTCGTCGACATGAGCGGCAACACGGTGGTGAAGCG CATCGCCGACATCACCCCGCCCGCTCCCGCCGCGGCGCCTCCGCCCCGCGCGCCGGAGCGCGCCCCCGCCCCAGGCGCTG GCGCCAGCGCCGCGGACATCCTTGACGAGATTCTGGCGGGTGGCGCGCCCGCCAACGAGTGGACGGACGAGGACCTCAAG CGGCTGCAGACGGTGCAGCAGAACCAGGAGAAGAGCTCCAAGATTCTGCGCGCGCTGCTCGAGCTGCTGCTGGAGAAGAA CCAGCTCCAGCAGCGCGAACTGGCGGCGCGGATGCGGCTGTAG
Upstream 100 bases:
>100_bases AGGGGCACAGCTGGGCGGCGGATTCCGCGAAGGGCTGCATGGCTGGGTCTCCTCATCACGGACTCAGCGTCCGCGCATCT AGACGGTAGAATGCCGAGCC
Downstream 100 bases:
>100_bases GGCGCGCCCTCAGCCGGCGCCCGAGCCCGCTTCCAGAAGCTCGCGGCCGGTGAGCCCCAGCAGGTAGAGGATGCTGTCCA GGCCGCCCGCGGCGATGGAC
Product: general secretion pathway protein E
Products: NA
Alternate protein names: General Secretion Pathway Protein E; General Secretory System II Protein E; General Secretory System II Protein E Domain Protein; Type IV-A Pilus Assembly ATPase PilB; Type IV Pilus Assembly Protein PilB; General Secretory System II Protein E-Like; Response Regulator Receiver Protein; Pili Biogenesis Protein PilB-Like ATPase; Response Regulator Receiver Domain-Containing Protein; Secretion System Protein E; GspE N-Terminal Domain-Containing Protein
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MASPSRNRIGDILVKARVIDDLQLRSALATHDQWGGRLSRIIADLGLATDDVITEAICQGLGMQRIQLGNVTRDAGALSR VDVSLAEQKAVFPVSLKDNGKTLVLAMADPTDLVTLDQVAAKSRARVVVMVAGEREIEHAILRHYRGQEPVVSTRFGGNK RPSSSDAPEDEDEFKVVDMSGNTVVKRIADITPPAPAAAPPPRAPERAPAPGAGASAADILDEILAGGAPANEWTDEDLK RLQTVQQNQEKSSKILRALLELLLEKNQLQQRELAARMRL
Sequences:
>Translated_280_residues MASPSRNRIGDILVKARVIDDLQLRSALATHDQWGGRLSRIIADLGLATDDVITEAICQGLGMQRIQLGNVTRDAGALSR VDVSLAEQKAVFPVSLKDNGKTLVLAMADPTDLVTLDQVAAKSRARVVVMVAGEREIEHAILRHYRGQEPVVSTRFGGNK RPSSSDAPEDEDEFKVVDMSGNTVVKRIADITPPAPAAAPPPRAPERAPAPGAGASAADILDEILAGGAPANEWTDEDLK RLQTVQQNQEKSSKILRALLELLLEKNQLQQRELAARMRL >Mature_279_residues ASPSRNRIGDILVKARVIDDLQLRSALATHDQWGGRLSRIIADLGLATDDVITEAICQGLGMQRIQLGNVTRDAGALSRV DVSLAEQKAVFPVSLKDNGKTLVLAMADPTDLVTLDQVAAKSRARVVVMVAGEREIEHAILRHYRGQEPVVSTRFGGNKR PSSSDAPEDEDEFKVVDMSGNTVVKRIADITPPAPAAAPPPRAPERAPAPGAGASAADILDEILAGGAPANEWTDEDLKR LQTVQQNQEKSSKILRALLELLLEKNQLQQRELAARMRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30236; Mature: 30105
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPSRNRIGDILVKARVIDDLQLRSALATHDQWGGRLSRIIADLGLATDDVITEAICQG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC LGMQRIQLGNVTRDAGALSRVDVSLAEQKAVFPVSLKDNGKTLVLAMADPTDLVTLDQVA CCCCEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHH AKSRARVVVMVAGEREIEHAILRHYRGQEPVVSTRFGGNKRPSSSDAPEDEDEFKVVDMS HHCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECC GNTVVKRIADITPPAPAAAPPPRAPERAPAPGAGASAADILDEILAGGAPANEWTDEDLK CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHH RLQTVQQNQEKSSKILRALLELLLEKNQLQQRELAARMRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ASPSRNRIGDILVKARVIDDLQLRSALATHDQWGGRLSRIIADLGLATDDVITEAICQG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC LGMQRIQLGNVTRDAGALSRVDVSLAEQKAVFPVSLKDNGKTLVLAMADPTDLVTLDQVA CCCCEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHH AKSRARVVVMVAGEREIEHAILRHYRGQEPVVSTRFGGNKRPSSSDAPEDEDEFKVVDMS HHCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECC GNTVVKRIADITPPAPAAAPPPRAPERAPAPGAGASAADILDEILAGGAPANEWTDEDLK CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHH RLQTVQQNQEKSSKILRALLELLLEKNQLQQRELAARMRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA