| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is erpA [H]
Identifier: 108760194
GI number: 108760194
Start: 6254094
End: 6254435
Strand: Direct
Name: erpA [H]
Synonym: MXAN_5003
Alternate gene names: 108760194
Gene position: 6254094-6254435 (Clockwise)
Preceding gene: 108760385
Following gene: 108761503
Centisome position: 68.43
GC content: 65.79
Gene sequence:
>342_bases GTGGCCAAGCCCCCCAAGGGCATCACCATTGCCGACAGCGCGGTGGCCCGGCTGAAGGAGCTGCTGGAGCAGCGGCAGAC GCCCGAGGCGGGCTTGCGGCTGGCCGTGAAGGGCGGCGGGTGCTCGGGCCTCCAGTACTCCATGGAGTGGTCGGAGAAGT CCCGCGAGCGCGACAAGATTTTCGAGAAGGACGGCGTGCGCGTCTTCGTGGACCCAAAGAGCTACCTGTACCTCATCGGT ACCGAGCTGGTGTTCGAGCAGACGCTCATGGCCTCCGGCTTCAAGCTGGACAACCCCAACATCAAGGCGGCCTGCGGCTG CGGAGAGAGCTTCTCCGTCTGA
Upstream 100 bases:
>100_bases CAGGCCAAGGCGTCCTGACGTTCGGGAAAGGGAGAGGCGAACCATGAGCGAACAGGCGACCCAGGAGACGACGCAGCGCC AGGCGCCTGCCACCGCGCCC
Downstream 100 bases:
>100_bases CGCGGCAGCACGCGCTCCGCCCCCTTCTGGGCGGAGCCGCCGCCACGCGGGCCCGGCCAGCCGCCGGGCCCTTTTCGTTT GTCCCCTCCCCGCATTGGAG
Product: iron-sulfur cluster assembly accessory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MAKPPKGITIADSAVARLKELLEQRQTPEAGLRLAVKGGGCSGLQYSMEWSEKSRERDKIFEKDGVRVFVDPKSYLYLIG TELVFEQTLMASGFKLDNPNIKAACGCGESFSV
Sequences:
>Translated_113_residues MAKPPKGITIADSAVARLKELLEQRQTPEAGLRLAVKGGGCSGLQYSMEWSEKSRERDKIFEKDGVRVFVDPKSYLYLIG TELVFEQTLMASGFKLDNPNIKAACGCGESFSV >Mature_112_residues AKPPKGITIADSAVARLKELLEQRQTPEAGLRLAVKGGGCSGLQYSMEWSEKSRERDKIFEKDGVRVFVDPKSYLYLIGT ELVFEQTLMASGFKLDNPNIKAACGCGESFSV
Specific function: Required for insertion of 4Fe-4S clusters (Potential) [H]
COG id: COG0316
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hesB/iscA family [H]
Homologues:
Organism=Homo sapiens, GI52426768, Length=108, Percent_Identity=40.7407407407407, Blast_Score=96, Evalue=5e-21, Organism=Homo sapiens, GI160420328, Length=107, Percent_Identity=41.1214953271028, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI1788877, Length=106, Percent_Identity=47.1698113207547, Blast_Score=98, Evalue=1e-22, Organism=Escherichia coli, GI1786351, Length=106, Percent_Identity=39.622641509434, Blast_Score=93, Evalue=4e-21, Organism=Escherichia coli, GI1787974, Length=108, Percent_Identity=35.1851851851852, Blast_Score=76, Evalue=4e-16, Organism=Caenorhabditis elegans, GI25146411, Length=106, Percent_Identity=39.622641509434, Blast_Score=96, Evalue=3e-21, Organism=Caenorhabditis elegans, GI193209025, Length=107, Percent_Identity=39.2523364485981, Blast_Score=96, Evalue=3e-21, Organism=Caenorhabditis elegans, GI71998452, Length=108, Percent_Identity=34.2592592592593, Blast_Score=66, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6323001, Length=107, Percent_Identity=39.2523364485981, Blast_Score=84, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6325324, Length=132, Percent_Identity=31.0606060606061, Blast_Score=64, Evalue=7e-12, Organism=Drosophila melanogaster, GI24642263, Length=108, Percent_Identity=41.6666666666667, Blast_Score=97, Evalue=2e-21, Organism=Drosophila melanogaster, GI24649697, Length=113, Percent_Identity=31.858407079646, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000361 - InterPro: IPR016092 - InterPro: IPR017870 - InterPro: IPR023063 [H]
Pfam domain/function: PF01521 Fe-S_biosyn [H]
EC number: NA
Molecular weight: Translated: 12404; Mature: 12273
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: PS01152 HESB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPPKGITIADSAVARLKELLEQRQTPEAGLRLAVKGGGCSGLQYSMEWSEKSRERDKI CCCCCCCCEECHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCHHHHHHHHH FEKDGVRVFVDPKSYLYLIGTELVFEQTLMASGFKLDNPNIKAACGCGESFSV HCCCCCEEEECCCCEEEEECHHHHHHHHHHHCCEEECCCCCEEEECCCCCCCC >Mature Secondary Structure AKPPKGITIADSAVARLKELLEQRQTPEAGLRLAVKGGGCSGLQYSMEWSEKSRERDKI CCCCCCCEECHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCHHHHHHHHH FEKDGVRVFVDPKSYLYLIGTELVFEQTLMASGFKLDNPNIKAACGCGESFSV HCCCCCEEEECCCCEEEEECHHHHHHHHHHHCCEEECCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA