| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760172
Identifier: 108760172
GI number: 108760172
Start: 2734100
End: 2735860
Strand: Reverse
Name: 108760172
Synonym: MXAN_2353
Alternate gene names: NA
Gene position: 2735860-2734100 (Counterclockwise)
Preceding gene: 108762934
Following gene: 108757584
Centisome position: 29.93
GC content: 67.23
Gene sequence:
>1761_bases GTGGGGACGTGGAAGTACCACCTGCTGCTGAGCGCCGTGGCCCTATTCATCCTGGGGCCCCTGGGCGGCATCGCCGCCTC GTACATGAACTTCAGCGTGGGCTTCTTCGTCGGCGGCCAGGTGCTGGCCGGCATCCTCGGCAGCGCCGTCACCTACGGGT ACGGCGCGGAGGGCAAGCACGGCGCCAACTACATGCAGACGATGGCCGCATCAGTGGCCTCGCTGTGCGCCATGTCCGTG CTCATCCAGTCCATGGTGTGGCTGGGCATGGAGATGCCCGCGGCCTGGCAGCTCATGCTCTTCGTCGGCTGCGTGGGCAT GTTCGCCGTGGGCGTGGGCATGCTCTACACGCCGCTGCTCGTGGACAAGCTCCAGCTCGACTATCCGTCCGGGCTGGCGG TGGCCAACATCCTGCGCGCCCTCACGGACAAGCGCCTGCTCAAGGCGTCCATCTCCAAGCTGGGCGGCGGCACCCTGCTG GGCGCCCTGGCGGCGTGGATGACGGAGAAGGTGGCCTTCGTCTCCTCCATCGGCACCAGCGCGGCGACGCTGGGCGCGGG CATGATTGTCGGCAGTCGCATCACCGTCCCCGCCATCGTGATGGCCGTCATCGGCGCGGTGCTGGTGCCCACCCTCCGCG AGATAGGGTGGCTCGGCCCTCAGGATCCGTTCCGCAAAATCGGCTTCGTCATCGGCCTGGGGATGATTTGCGGCGCGGCC GTGGTGGACCTGTCGCTGCTGGCGGTCCAGGCGGCGAAGCGCATCCGCGAGCGGGCCTCGGCGAAAGACGAAGAGGAGGA GTCCTGGAAGAAGGTCAACATCCCCCGGCTGCTGGCCTGGGTGGGTGTCTGGGGCGGCGCGACGCTGGTGGTGGGCACGC AGGTGCTGAATCAGCCTGTCGGCTGGCTCCTCTTCGGCATGCTGCTCGCCCTGCTGTTCGTGCTCATCAACGGCATCTCG TTCGGAATCACCGACCAGAACCCCATCTCCAGCGCCTTCGTCATCTCCGTGCTGATGATGTCCATGATGGGCCTGCGCGT TCCGCTGGTGGGCATGATGGCCGCCACCATCCTGCTCATCTCCACCTCGGTGGGCTGCGACATGCAGCAGGACCGCTCCA CCGGCTGGCGCCTGGGCACCAACCGCGTCACCCAGTTCCGCTATCAGGTGCTGGGCGTCACCATGGGCGCGCTGCTGTGC GTGGGCCTGGCGCGCGTGTTCATGACCGCCTACCCGGCGCTCACCATCAACCAGCTCGACAACCCCAACGCCGAAGTGGG CCAGTGGGGCTCCGCGATGACGTACAAGCTGGTGGGCGCCATCCGCGACCTCGGCTCGCTGTCGCAGGCCGTCGTGAATG CCCTGCTCCTCGGATTGGCCATCGGCTTCATCTACGAACTGCTGCGCAAGGTGGTGCGAGGCAACGCGCGCTACCAGCAG TACGTGAAGGGTTCCCGAAAGGGCTTCGCCGTCGGCTGGACGGTGGACGCCATCCTGCTTCCCAGTCCCTACGCGTCGTC GTTCGGCGGCTTCGTGGCGTTCCCGGTGTCGCTGTGGTTCGGCGCGGGCGGCATCGTGACGTCCGTCTGGAACACGTTCT CCAAGCGTGAAGAGCCCGCGGTGAGTGGCAGCCCGGGTGAAGGCGAGGCCCTTCCGGAGGACATGAGCACCATGTCCCTC ATGGGCGGTGGCCTCATCGCCGGTGAGTCGCTGTTCTTCCTCATCGCCGGCCTCATCGGGCTCGCGTCGCTGTTGGCGTA G
Upstream 100 bases:
>100_bases GTCATTGTCAGCCCCCTCGCTCCCCCCGGAGCCCCCTCCCCCGTCCTCGGGCGGCGCCCTCGCGGAGCCCTCCCAACGTC GCTTCCACTGGCTGCCCCCC
Downstream 100 bases:
>100_bases CAACACCTGCACGGGCCCTCCCAGTGGCGCAGGGTCCGTGCACGGGGCCGAGTTGACAATTCTCCGCGCCCCTCGCATCT TCTTCGCCGTGAGCTTCGTC
Product: putative oligopeptide transporter
Products: NA
Alternate protein names: OPT Superfamily Oligopeptide Transporter
Number of amino acids: Translated: 586; Mature: 585
Protein sequence:
>586_residues MGTWKYHLLLSAVALFILGPLGGIAASYMNFSVGFFVGGQVLAGILGSAVTYGYGAEGKHGANYMQTMAASVASLCAMSV LIQSMVWLGMEMPAAWQLMLFVGCVGMFAVGVGMLYTPLLVDKLQLDYPSGLAVANILRALTDKRLLKASISKLGGGTLL GALAAWMTEKVAFVSSIGTSAATLGAGMIVGSRITVPAIVMAVIGAVLVPTLREIGWLGPQDPFRKIGFVIGLGMICGAA VVDLSLLAVQAAKRIRERASAKDEEEESWKKVNIPRLLAWVGVWGGATLVVGTQVLNQPVGWLLFGMLLALLFVLINGIS FGITDQNPISSAFVISVLMMSMMGLRVPLVGMMAATILLISTSVGCDMQQDRSTGWRLGTNRVTQFRYQVLGVTMGALLC VGLARVFMTAYPALTINQLDNPNAEVGQWGSAMTYKLVGAIRDLGSLSQAVVNALLLGLAIGFIYELLRKVVRGNARYQQ YVKGSRKGFAVGWTVDAILLPSPYASSFGGFVAFPVSLWFGAGGIVTSVWNTFSKREEPAVSGSPGEGEALPEDMSTMSL MGGGLIAGESLFFLIAGLIGLASLLA
Sequences:
>Translated_586_residues MGTWKYHLLLSAVALFILGPLGGIAASYMNFSVGFFVGGQVLAGILGSAVTYGYGAEGKHGANYMQTMAASVASLCAMSV LIQSMVWLGMEMPAAWQLMLFVGCVGMFAVGVGMLYTPLLVDKLQLDYPSGLAVANILRALTDKRLLKASISKLGGGTLL GALAAWMTEKVAFVSSIGTSAATLGAGMIVGSRITVPAIVMAVIGAVLVPTLREIGWLGPQDPFRKIGFVIGLGMICGAA VVDLSLLAVQAAKRIRERASAKDEEEESWKKVNIPRLLAWVGVWGGATLVVGTQVLNQPVGWLLFGMLLALLFVLINGIS FGITDQNPISSAFVISVLMMSMMGLRVPLVGMMAATILLISTSVGCDMQQDRSTGWRLGTNRVTQFRYQVLGVTMGALLC VGLARVFMTAYPALTINQLDNPNAEVGQWGSAMTYKLVGAIRDLGSLSQAVVNALLLGLAIGFIYELLRKVVRGNARYQQ YVKGSRKGFAVGWTVDAILLPSPYASSFGGFVAFPVSLWFGAGGIVTSVWNTFSKREEPAVSGSPGEGEALPEDMSTMSL MGGGLIAGESLFFLIAGLIGLASLLA >Mature_585_residues GTWKYHLLLSAVALFILGPLGGIAASYMNFSVGFFVGGQVLAGILGSAVTYGYGAEGKHGANYMQTMAASVASLCAMSVL IQSMVWLGMEMPAAWQLMLFVGCVGMFAVGVGMLYTPLLVDKLQLDYPSGLAVANILRALTDKRLLKASISKLGGGTLLG ALAAWMTEKVAFVSSIGTSAATLGAGMIVGSRITVPAIVMAVIGAVLVPTLREIGWLGPQDPFRKIGFVIGLGMICGAAV VDLSLLAVQAAKRIRERASAKDEEEESWKKVNIPRLLAWVGVWGGATLVVGTQVLNQPVGWLLFGMLLALLFVLINGISF GITDQNPISSAFVISVLMMSMMGLRVPLVGMMAATILLISTSVGCDMQQDRSTGWRLGTNRVTQFRYQVLGVTMGALLCV GLARVFMTAYPALTINQLDNPNAEVGQWGSAMTYKLVGAIRDLGSLSQAVVNALLLGLAIGFIYELLRKVVRGNARYQQY VKGSRKGFAVGWTVDAILLPSPYASSFGGFVAFPVSLWFGAGGIVTSVWNTFSKREEPAVSGSPGEGEALPEDMSTMSLM GGGLIAGESLFFLIAGLIGLASLLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61743; Mature: 61612
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTWKYHLLLSAVALFILGPLGGIAASYMNFSVGFFVGGQVLAGILGSAVTYGYGAEGKH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GANYMQTMAASVASLCAMSVLIQSMVWLGMEMPAAWQLMLFVGCVGMFAVGVGMLYTPLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VDKLQLDYPSGLAVANILRALTDKRLLKASISKLGGGTLLGALAAWMTEKVAFVSSIGTS HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCH AATLGAGMIVGSRITVPAIVMAVIGAVLVPTLREIGWLGPQDPFRKIGFVIGLGMICGAA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH VVDLSLLAVQAAKRIRERASAKDEEEESWKKVNIPRLLAWVGVWGGATLVVGTQVLNQPV HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCH GWLLFGMLLALLFVLINGISFGITDQNPISSAFVISVLMMSMMGLRVPLVGMMAATILLI HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STSVGCDMQQDRSTGWRLGTNRVTQFRYQVLGVTMGALLCVGLARVFMTAYPALTINQLD HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC NPNAEVGQWGSAMTYKLVGAIRDLGSLSQAVVNALLLGLAIGFIYELLRKVVRGNARYQQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH YVKGSRKGFAVGWTVDAILLPSPYASSFGGFVAFPVSLWFGAGGIVTSVWNTFSKREEPA HHCCCCCCEEEEEEEEEEECCCCCHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC VSGSPGEGEALPEDMSTMSLMGGGLIAGESLFFLIAGLIGLASLLA CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure GTWKYHLLLSAVALFILGPLGGIAASYMNFSVGFFVGGQVLAGILGSAVTYGYGAEGKH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GANYMQTMAASVASLCAMSVLIQSMVWLGMEMPAAWQLMLFVGCVGMFAVGVGMLYTPLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VDKLQLDYPSGLAVANILRALTDKRLLKASISKLGGGTLLGALAAWMTEKVAFVSSIGTS HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCH AATLGAGMIVGSRITVPAIVMAVIGAVLVPTLREIGWLGPQDPFRKIGFVIGLGMICGAA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH VVDLSLLAVQAAKRIRERASAKDEEEESWKKVNIPRLLAWVGVWGGATLVVGTQVLNQPV HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCH GWLLFGMLLALLFVLINGISFGITDQNPISSAFVISVLMMSMMGLRVPLVGMMAATILLI HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH STSVGCDMQQDRSTGWRLGTNRVTQFRYQVLGVTMGALLCVGLARVFMTAYPALTINQLD HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC NPNAEVGQWGSAMTYKLVGAIRDLGSLSQAVVNALLLGLAIGFIYELLRKVVRGNARYQQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH YVKGSRKGFAVGWTVDAILLPSPYASSFGGFVAFPVSLWFGAGGIVTSVWNTFSKREEPA HHCCCCCCEEEEEEEEEEECCCCCHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC VSGSPGEGEALPEDMSTMSLMGGGLIAGESLFFLIAGLIGLASLLA CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA