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The map label for this gene is ccmE [H]

Identifier: 108760136

GI number: 108760136

Start: 3808350

End: 3808826

Strand: Reverse

Name: ccmE [H]

Synonym: MXAN_3254

Alternate gene names: 108760136

Gene position: 3808826-3808350 (Counterclockwise)

Preceding gene: 108760859

Following gene: 108759086

Centisome position: 41.67

GC content: 66.04

Gene sequence:

>477_bases
ATGTCCCCCGTCGCTCGCAACCGTCTGATTGCCCTGGGGGCCCTGCTCGTCGCGGGGGCTGGCCTGGGATTCGTGGCCTT
CGGCAACATCGGTGAGAACCTCGTCTACTACTGGAGCCCGTCGGAGATGCTGGGCCAGGGTGACAAGGCGTACTCGGCCA
CCATCCGCCTGGGGGGCGTGGTGGAGGCAGGCAGCATCCAGTGGAACGCGGAGCACACCACCCTGCAATTCCGCGTGGCG
GATGACGTCAAGGAAGGCGCGCCCAGCGTGCTGGTGCGCGCCACGGAGACGCCTCCGCAGATGTTCCGCGACAAGATTGG
CGTCGTCGTGGAAGGCACCTACGACAAGTCCGGCGTCTTCAGCTCCAACCGGCTGATGGTGAACCACTCCAACGAGTACC
GCGCCCCCAAGGAGGGTGAGGATCCTCGTCAGTGGCAGGAGACGCTCTCCGACGCCACCGCCATGGGTGCGAAGTGA

Upstream 100 bases:

>100_bases
GGCCTGCTACGGCATTACAGTCGCCATGCTCGTTCTCTACGCTGTGTCCCTGTGGGTTCGTCGGCCCAAAGCCCCCACCG
ACGCCAAGGAGTGAGTCGCC

Downstream 100 bases:

>100_bases
ACGGAACCGTTGGCTACGGCCTCGTGCTCGGAGGGCTCGCGTTCGCGACCTTCGGCGCACTCGTAGGCCTGGTGAGCGGC
CTGCGTCGAAGTGACGCAGG

Product: cytochrome c-type biogenesis protein CcmE

Products: NA

Alternate protein names: Cytochrome c maturation protein E; Heme chaperone CcmE [H]

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSPVARNRLIALGALLVAGAGLGFVAFGNIGENLVYYWSPSEMLGQGDKAYSATIRLGGVVEAGSIQWNAEHTTLQFRVA
DDVKEGAPSVLVRATETPPQMFRDKIGVVVEGTYDKSGVFSSNRLMVNHSNEYRAPKEGEDPRQWQETLSDATAMGAK

Sequences:

>Translated_158_residues
MSPVARNRLIALGALLVAGAGLGFVAFGNIGENLVYYWSPSEMLGQGDKAYSATIRLGGVVEAGSIQWNAEHTTLQFRVA
DDVKEGAPSVLVRATETPPQMFRDKIGVVVEGTYDKSGVFSSNRLMVNHSNEYRAPKEGEDPRQWQETLSDATAMGAK
>Mature_157_residues
SPVARNRLIALGALLVAGAGLGFVAFGNIGENLVYYWSPSEMLGQGDKAYSATIRLGGVVEAGSIQWNAEHTTLQFRVAD
DVKEGAPSVLVRATETPPQMFRDKIGVVVEGTYDKSGVFSSNRLMVNHSNEYRAPKEGEDPRQWQETLSDATAMGAK

Specific function: Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH [H]

COG id: COG2332

COG function: function code O; Cytochrome c-type biogenesis protein CcmE

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmE/CycJ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004329
- InterPro:   IPR012340 [H]

Pfam domain/function: PF03100 CcmE [H]

EC number: NA

Molecular weight: Translated: 17062; Mature: 16931

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPVARNRLIALGALLVAGAGLGFVAFGNIGENLVYYWSPSEMLGQGDKAYSATIRLGGV
CCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCHHHHCCCCCEEEEEEEECCE
VEAGSIQWNAEHTTLQFRVADDVKEGAPSVLVRATETPPQMFRDKIGVVVEGTYDKSGVF
EECCCEEECCCCEEEEEEECCCHHCCCCEEEEEECCCCHHHHHHHCCEEEECCCCCCCCE
SSNRLMVNHSNEYRAPKEGEDPRQWQETLSDATAMGAK
ECCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SPVARNRLIALGALLVAGAGLGFVAFGNIGENLVYYWSPSEMLGQGDKAYSATIRLGGV
CCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEECCHHHHCCCCCEEEEEEEECCE
VEAGSIQWNAEHTTLQFRVADDVKEGAPSVLVRATETPPQMFRDKIGVVVEGTYDKSGVF
EECCCEEECCCCEEEEEEECCCHHCCCCEEEEEECCCCHHHHHHHCCEEEECCCCCCCCE
SSNRLMVNHSNEYRAPKEGEDPRQWQETLSDATAMGAK
ECCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA