| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is 108760067
Identifier: 108760067
GI number: 108760067
Start: 2583659
End: 2586127
Strand: Direct
Name: 108760067
Synonym: MXAN_2241
Alternate gene names: NA
Gene position: 2583659-2586127 (Clockwise)
Preceding gene: 108760138
Following gene: 108760361
Centisome position: 28.27
GC content: 69.46
Gene sequence:
>2469_bases ATGAACTCCAGCCCATCCAGCCGGTCGTCCGTCGTCGTGGCGGAGCTGGGGCCCACGAACACGGGGAAGACCCACCGAGC CATCGAGCGCATGCTCGAGCACGGTTCGGGCATCATGGGGTTGCCGCTCCGCCTGCTCGCCCGCGAAGTCTATGACCGGG TGACCGCTCGGGTGGGTGAGGGCCGCGTGGCGCTGATGACGGGGGAGGAGAAGCGCGTGCCCCCGCGCCCCGACTACTGG ATTTGCACCGTCGAGGCGATGCCGACCGACAAGTCCGTCGACTTCCTCGCGGTGGATGAAATCCAGCTCGCTGCTCACCG TGAACGCGGGCACGTCTTCACGGATCGACTGCTCCATGCGCGGGGACGCAAGGAGACCTGGTTCCTGGGCGCGGACACGA TGCGTCCCATGGTCCAGACGCTCATCCCCCATGCCTCGGTGAAGCGCGCTACCCGTCTGTCACAGCTTCGTTATGCCGGG CATCGCTCCCTGAAGAGCCTCCCGCCGCGGTCGGCGGTGGTCGCGTTCTCCGCGGACCGCGTCTACGAGTTGGCCGAGTC GCTGCGGCGCCTCCGGGGCGGCGTGGCCGTGGTGCTGGGCGCGCTGTCTCCCCGGACGCGAAACGCCCAGGTGGCGATGT ACCAATCCGGAGAGGTGCAGTATCTGGTGGCCACGGATGCCATTGGCATGGGGCTGAACCTGGACCTCAACCACGTGGCC TTCGCCGCGCTGTCCAAGTTCGACGGCGCCGACCAGCGCGAGCTCTATCCGGACGAGCTGGCGCAGATCGCTGGCCGCGC CGGCCGCCACTTGAACGATGGGAGTTTCGGCACGCTGAACACGTTGCCGGAGCTGCCGCCGCGGGTGGTCTCCGCCATCG AGACGCACCGCTTCCCGGCGGTCCGGAGCCTCATCTGGCGCAATGCCGCGCTCGACTTCTCGAGCCCAGAGGCCCTGCTG GATTCACTGGCGCGCGCGCCGGGCCACAGTGCCTTCATCCGGGTGGAGCGCGCGGATGATTTCGATGCGCTCAAGGACCT CTCGCGTGTTCCAACCATCCAGGACCTGGCCACCGGGCCGGCCATGGTGGAGCTGCTGTGGCAGGTCTGCCAGATACCCG ACTTCCGGAAGGGGCTCTTCGGCCAGCATGTCGCGTTGCTGCGTGAGACGTTCCTGCAACTCACCGCGGGGGACGGGAAG CTGGACGCCGTCTGGCTGAACAAGCAGGTGGCTCCGCTCGACGACGTGTCCGGAGACATCCACACGCTGATGGACCGGCT GGCGGCCATCCGCATCTGGACGTACATCAGTCATCGGCCGGGGTGGCTGCACGAGGCGGAACACTGGCAGGAGCGGACGC GCGGCATCGAGGATGCGCTGGGGGACGCGCTCCATGAACGGCTCGTCGAGCGCTTCGTGCAGCGCGCCGCGAGGCGCAGC ACGCGTCGCTTTGTGAAGGCCACCGCGCGCCCTCCGTCCGGTTCGGCCAGTCCCTTCGCCAAGCTGGGGCAGATGCTGGA GGAGATGCCGGGCGCCGAGGGCTTCGCGATGACGGAGGAGCAGTTCGTCCAGCGGGTGGTGGACGCGAGCCATGATGCCT TCCAGGTGGATGCGAGTGGCGCCATCTCCTTCGAAGGCGAGCCCCTGGCGCGCCTCGTTCGCGGGACGGACCGCCGCTCC CCTTTGCTGGCACTGGCGGAGCCGGAGGTCTGGACGGGCGGCGCGCGGCAGCGGCTGGAGCGGCGTCTGCTCGCGCTGGC GCGGGACCTCGTCACCGAGGCCATGGGCGGCTTTCCCTCCGAGTCCTTCTCCGGAGCGGGGCGCAACGCGGCGGCGCGTG GGCTCGCGTATCGCCTGTCCGAAGGACTGGGCGTGATTACGCAGGGCGAGGCGCATGAGCAGTGGCGGCTGTTGGATGAG GAGGCTCGCGCGCGCTTGACGGAGCAAGGCGTCTGCGAGGGACACCGCTTCGTCTACGTCGCCGAGGCCCTCAGCCCGCA TGCGCTGGAGCGGCGCTGCATGCTCACGTCGCTGTTCCTCCAGCGGACATGTCCCACCGGGGTGCCACGAGAACCCGTGC TTCAGCTCTCCGAGTTGGATCGCCGCGACGCACGTGCCTATGGGTACGAGGTGCTCGGGAGCGTGGTTCTTCGCATCGAC ATCGTCGAGCGGCTGTGCGAGGCCCTGCGCCACCCGCATGGGGGCCGGCAGGTGCAGGCGCTCATGCAGGACCTCCGCCT GGAGGGGAGTATCCGGGCTCGGGTGCTGCGCGAGCTGGGAGGCGCCATTGGAAACCCTCCGCCGCGGCGGCGCCGTCGCC GACGTGGCGGCGCCGCGCAAGTGTCCGGCACGAGCGGCGCTCACCCAGGTTCGCCTCGGAGCGGGGCCTCGGAGCGGAAG GGACGTCGGCCCCGAGAGGGGGCGGTCCGGAATGCCACGGCGTTTCGAGACGGACCCTCGGAATCATGA
Upstream 100 bases:
>100_bases CACTGAGCCACCGCGCGCCACGCCAGGACGCTGGCGTGGGCTTCGCGGCCGCCGCCGCTGGAGCCGGGCGGAGGGGCCTG TCCGAGGTTAGACTCCGCGG
Downstream 100 bases:
>100_bases GGCGCTGGCGCACCCGTCTGCGCCGGAGCTCCTCGTTTGAAGGGGCGGCTCGTGCAGGTGCTCGGCGACTGGACGTCCGC CGAGCCGGGCCCCGCCCCCG
Product: putative helicase
Products: NA
Alternate protein names: Helicase Domain Protein; Helicase; Helicase-Like; Helicase Conserved C-Terminal Domain Protein; ATP-Dependent Helicase; ATP-Dependent RNA Helicase; ATP-Dependent DNA Helicase; ATP-Dependent DNA Helicase Protein; MgpS ATP-Dependent Helicase; RNA Helicase; Superfamily II DNA/RNA Helicase; Helicase-Like Protein; Superfamily II DNA And RNA Helicase; ATP-Dependent RNA And DNA Helicase; ATP Dependent RNA Helicase; Adenosinetriphosphatase; RNA Helicase RhrA; ATP-Dependent Helicase MgpS; ATP-Dependent RNA Helicase Superfamily II; Helicase C-Terminal Domain Protein; DNA Helicase; ATP-Dependent DNA And RNA Helicase Protein
Number of amino acids: Translated: 822; Mature: 822
Protein sequence:
>822_residues MNSSPSSRSSVVVAELGPTNTGKTHRAIERMLEHGSGIMGLPLRLLAREVYDRVTARVGEGRVALMTGEEKRVPPRPDYW ICTVEAMPTDKSVDFLAVDEIQLAAHRERGHVFTDRLLHARGRKETWFLGADTMRPMVQTLIPHASVKRATRLSQLRYAG HRSLKSLPPRSAVVAFSADRVYELAESLRRLRGGVAVVLGALSPRTRNAQVAMYQSGEVQYLVATDAIGMGLNLDLNHVA FAALSKFDGADQRELYPDELAQIAGRAGRHLNDGSFGTLNTLPELPPRVVSAIETHRFPAVRSLIWRNAALDFSSPEALL DSLARAPGHSAFIRVERADDFDALKDLSRVPTIQDLATGPAMVELLWQVCQIPDFRKGLFGQHVALLRETFLQLTAGDGK LDAVWLNKQVAPLDDVSGDIHTLMDRLAAIRIWTYISHRPGWLHEAEHWQERTRGIEDALGDALHERLVERFVQRAARRS TRRFVKATARPPSGSASPFAKLGQMLEEMPGAEGFAMTEEQFVQRVVDASHDAFQVDASGAISFEGEPLARLVRGTDRRS PLLALAEPEVWTGGARQRLERRLLALARDLVTEAMGGFPSESFSGAGRNAAARGLAYRLSEGLGVITQGEAHEQWRLLDE EARARLTEQGVCEGHRFVYVAEALSPHALERRCMLTSLFLQRTCPTGVPREPVLQLSELDRRDARAYGYEVLGSVVLRID IVERLCEALRHPHGGRQVQALMQDLRLEGSIRARVLRELGGAIGNPPPRRRRRRRGGAAQVSGTSGAHPGSPRSGASERK GRRPREGAVRNATAFRDGPSES
Sequences:
>Translated_822_residues MNSSPSSRSSVVVAELGPTNTGKTHRAIERMLEHGSGIMGLPLRLLAREVYDRVTARVGEGRVALMTGEEKRVPPRPDYW ICTVEAMPTDKSVDFLAVDEIQLAAHRERGHVFTDRLLHARGRKETWFLGADTMRPMVQTLIPHASVKRATRLSQLRYAG HRSLKSLPPRSAVVAFSADRVYELAESLRRLRGGVAVVLGALSPRTRNAQVAMYQSGEVQYLVATDAIGMGLNLDLNHVA FAALSKFDGADQRELYPDELAQIAGRAGRHLNDGSFGTLNTLPELPPRVVSAIETHRFPAVRSLIWRNAALDFSSPEALL DSLARAPGHSAFIRVERADDFDALKDLSRVPTIQDLATGPAMVELLWQVCQIPDFRKGLFGQHVALLRETFLQLTAGDGK LDAVWLNKQVAPLDDVSGDIHTLMDRLAAIRIWTYISHRPGWLHEAEHWQERTRGIEDALGDALHERLVERFVQRAARRS TRRFVKATARPPSGSASPFAKLGQMLEEMPGAEGFAMTEEQFVQRVVDASHDAFQVDASGAISFEGEPLARLVRGTDRRS PLLALAEPEVWTGGARQRLERRLLALARDLVTEAMGGFPSESFSGAGRNAAARGLAYRLSEGLGVITQGEAHEQWRLLDE EARARLTEQGVCEGHRFVYVAEALSPHALERRCMLTSLFLQRTCPTGVPREPVLQLSELDRRDARAYGYEVLGSVVLRID IVERLCEALRHPHGGRQVQALMQDLRLEGSIRARVLRELGGAIGNPPPRRRRRRRGGAAQVSGTSGAHPGSPRSGASERK GRRPREGAVRNATAFRDGPSES >Mature_822_residues MNSSPSSRSSVVVAELGPTNTGKTHRAIERMLEHGSGIMGLPLRLLAREVYDRVTARVGEGRVALMTGEEKRVPPRPDYW ICTVEAMPTDKSVDFLAVDEIQLAAHRERGHVFTDRLLHARGRKETWFLGADTMRPMVQTLIPHASVKRATRLSQLRYAG HRSLKSLPPRSAVVAFSADRVYELAESLRRLRGGVAVVLGALSPRTRNAQVAMYQSGEVQYLVATDAIGMGLNLDLNHVA FAALSKFDGADQRELYPDELAQIAGRAGRHLNDGSFGTLNTLPELPPRVVSAIETHRFPAVRSLIWRNAALDFSSPEALL DSLARAPGHSAFIRVERADDFDALKDLSRVPTIQDLATGPAMVELLWQVCQIPDFRKGLFGQHVALLRETFLQLTAGDGK LDAVWLNKQVAPLDDVSGDIHTLMDRLAAIRIWTYISHRPGWLHEAEHWQERTRGIEDALGDALHERLVERFVQRAARRS TRRFVKATARPPSGSASPFAKLGQMLEEMPGAEGFAMTEEQFVQRVVDASHDAFQVDASGAISFEGEPLARLVRGTDRRS PLLALAEPEVWTGGARQRLERRLLALARDLVTEAMGGFPSESFSGAGRNAAARGLAYRLSEGLGVITQGEAHEQWRLLDE EARARLTEQGVCEGHRFVYVAEALSPHALERRCMLTSLFLQRTCPTGVPREPVLQLSELDRRDARAYGYEVLGSVVLRID IVERLCEALRHPHGGRQVQALMQDLRLEGSIRARVLRELGGAIGNPPPRRRRRRRGGAAQVSGTSGAHPGSPRSGASERK GRRPREGAVRNATAFRDGPSES
Specific function: Unknown
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI31543667, Length=291, Percent_Identity=32.9896907216495, Blast_Score=121, Evalue=3e-27, Organism=Caenorhabditis elegans, GI115532782, Length=292, Percent_Identity=34.5890410958904, Blast_Score=117, Evalue=4e-26, Organism=Caenorhabditis elegans, GI115532784, Length=292, Percent_Identity=34.5890410958904, Blast_Score=116, Evalue=5e-26, Organism=Saccharomyces cerevisiae, GI6325228, Length=385, Percent_Identity=29.8701298701299, Blast_Score=146, Evalue=1e-35, Organism=Drosophila melanogaster, GI221329989, Length=279, Percent_Identity=32.6164874551971, Blast_Score=118, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90764; Mature: 90764
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSSPSSRSSVVVAELGPTNTGKTHRAIERMLEHGSGIMGLPLRLLAREVYDRVTARVGE CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC GRVALMTGEEKRVPPRPDYWICTVEAMPTDKSVDFLAVDEIQLAAHRERGHVFTDRLLHA CEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCEEEECHHHHHHHHHCCCHHHHHHHHH RGRKETWFLGADTMRPMVQTLIPHASVKRATRLSQLRYAGHRSLKSLPPRSAVVAFSADR CCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHH VYELAESLRRLRGGVAVVLGALSPRTRNAQVAMYQSGEVQYLVATDAIGMGLNLDLNHVA HHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCHHHHH FAALSKFDGADQRELYPDELAQIAGRAGRHLNDGSFGTLNTLPELPPRVVSAIETHRFPA HHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHH VRSLIWRNAALDFSSPEALLDSLARAPGHSAFIRVERADDFDALKDLSRVPTIQDLATGP HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHCCH AMVELLWQVCQIPDFRKGLFGQHVALLRETFLQLTAGDGKLDAVWLNKQVAPLDDVSGDI HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHCCCHH HTLMDRLAAIRIWTYISHRPGWLHEAEHWQERTRGIEDALGDALHERLVERFVQRAARRS HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH TRRFVKATARPPSGSASPFAKLGQMLEEMPGAEGFAMTEEQFVQRVVDASHDAFQVDASG HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCC AISFEGEPLARLVRGTDRRSPLLALAEPEVWTGGARQRLERRLLALARDLVTEAMGGFPS EEEECCCHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC ESFSGAGRNAAARGLAYRLSEGLGVITQGEAHEQWRLLDEEARARLTEQGVCEGHRFVYV CCCCCCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEE AEALSPHALERRCMLTSLFLQRTCPTGVPREPVLQLSELDRRDARAYGYEVLGSVVLRID ECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVERLCEALRHPHGGRQVQALMQDLRLEGSIRARVLRELGGAIGNPPPRRRRRRRGGAAQ HHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCE VSGTSGAHPGSPRSGASERKGRRPREGAVRNATAFRDGPSES ECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHCCCCCCCC >Mature Secondary Structure MNSSPSSRSSVVVAELGPTNTGKTHRAIERMLEHGSGIMGLPLRLLAREVYDRVTARVGE CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC GRVALMTGEEKRVPPRPDYWICTVEAMPTDKSVDFLAVDEIQLAAHRERGHVFTDRLLHA CEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCEEEECHHHHHHHHHCCCHHHHHHHHH RGRKETWFLGADTMRPMVQTLIPHASVKRATRLSQLRYAGHRSLKSLPPRSAVVAFSADR CCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHH VYELAESLRRLRGGVAVVLGALSPRTRNAQVAMYQSGEVQYLVATDAIGMGLNLDLNHVA HHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCHHHHH FAALSKFDGADQRELYPDELAQIAGRAGRHLNDGSFGTLNTLPELPPRVVSAIETHRFPA HHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHH VRSLIWRNAALDFSSPEALLDSLARAPGHSAFIRVERADDFDALKDLSRVPTIQDLATGP HHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHCCH AMVELLWQVCQIPDFRKGLFGQHVALLRETFLQLTAGDGKLDAVWLNKQVAPLDDVSGDI HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHCCCHH HTLMDRLAAIRIWTYISHRPGWLHEAEHWQERTRGIEDALGDALHERLVERFVQRAARRS HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH TRRFVKATARPPSGSASPFAKLGQMLEEMPGAEGFAMTEEQFVQRVVDASHDAFQVDASG HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCEEECCCC AISFEGEPLARLVRGTDRRSPLLALAEPEVWTGGARQRLERRLLALARDLVTEAMGGFPS EEEECCCHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC ESFSGAGRNAAARGLAYRLSEGLGVITQGEAHEQWRLLDEEARARLTEQGVCEGHRFVYV CCCCCCCCCHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEE AEALSPHALERRCMLTSLFLQRTCPTGVPREPVLQLSELDRRDARAYGYEVLGSVVLRID ECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVERLCEALRHPHGGRQVQALMQDLRLEGSIRARVLRELGGAIGNPPPRRRRRRRGGAAQ HHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCE VSGTSGAHPGSPRSGASERKGRRPREGAVRNATAFRDGPSES ECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA