| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108760052
Identifier: 108760052
GI number: 108760052
Start: 5217169
End: 5218338
Strand: Direct
Name: 108760052
Synonym: MXAN_4255
Alternate gene names: NA
Gene position: 5217169-5218338 (Clockwise)
Preceding gene: 108757918
Following gene: 108759845
Centisome position: 57.08
GC content: 74.44
Gene sequence:
>1170_bases TTGATGCGGACAGCCCCTTGGATGATGGCGGTGATGCTGGCGGGTCCACCCGCGCTCGCCGCGCAGACGCAGGCGCCGTG CGGCGGGCTGCGCTTCGACAGCGGCCGGATCGTGTTCGGCCGGCCGCTGGCCCCCCAGGGCGCGGAGACGGACGCGTGCC TGGCGCACGTAGCCCAAGCGCTCCTGGCGCGCCCCGCCATCCGTTCCGTGACGGTGGCGGCGAAGCTTCCGGACGCAGAA CGGCTGGACGGCCAGGGCCTGGCCGCGGCGAAACGGGCCGCGGATGTGCTGGTGGCGGCGGGCGTGCCCCGCACGCGCGT GTCCGCCATGGCGCCGCCGTCCGTGGAGGGCGAGCCCGCACAGCTCCAGTTCGCCTACGTGGAGCGGCCCGCCCAGCCCG CGGTGGCCCGGCTACGGGCGGCCAGCGGCGCGGTGGAGGCCGGCGCGACGGAAGCCCAACTCCTCGCGCGGACGGTGGGT GACGCGCTCTACCCGGGCGAGCTGCTGCGCACCGGCGAGGACGCCCGGGCCGAGCTGGCCCTGGCGGACGGCAGCATGGT GCGCGTGGTGGAGAACAGTCTCATCAAGGTGGGCGCCATCGAGCTGATGGCGAACCTCCAGCGCAAGGTGCAGTTGGACT TGCTGCGAGGCACCGTGGAGACGGACGCGGCGCCGGGTGGCGCGGGCTCCATCTTCGAGGTCCGCACGCGCGGCGCGGTG GCCGGTGTGCGGGGCACCCGGTTCCGCGTGTCGGCCCAGGACGACGGCACCAGCCGGCTGGAAACACTGGAAGGCAAGGT GGCCCTCAGCGCGGAGCAGGCCGAGGTCGAGGTGTCGGGCGGACATGGTTCGCGCGCGAAGCCGGGCTCGCCTCCGGAGC CGCCTCGCCCGCTGCTGCCGGCGCCCACGCTGGTGGGCCCTCGGGGAGGCGCGTTCGCCACGGCCCCGAAGGTGTCCTGG CGGACGCTGGAGGGCGCCGCGACATACCGCGTGGAGGTGGCTCGCACGGCGGACTTCGCCGCGAGCGTCCAGACGTATGA CAGCGCCAGCCCGGAGCTGGCGATTCCCGGGCCCCGCCAGGGCAAGTGGTTCTGGCGGGTGATGGCCGTGGACGGAGACG GCTTCGTGGGCTTCCCCTCGAAGATCTACGCCTTCGACGTCCAGCCCTGA
Upstream 100 bases:
>100_bases CGGTCGACACCAACGAGACGGCCAAGGGGCGCGAGAACAACCGGCGCGTCGAGTTCAACATCGTGAAGGTCGCCGAGCCT TCGACGGGAGGAGGCACGCG
Downstream 100 bases:
>100_bases GACTGTTGCGTTGCGTGCGCCCATTCGCACACGCATGATGGCCGGGCCCTGCCTCCCAGCAGGCCCCCGCCCATGGACTC CAGTCCCGCCGAGCCCCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MMRTAPWMMAVMLAGPPALAAQTQAPCGGLRFDSGRIVFGRPLAPQGAETDACLAHVAQALLARPAIRSVTVAAKLPDAE RLDGQGLAAAKRAADVLVAAGVPRTRVSAMAPPSVEGEPAQLQFAYVERPAQPAVARLRAASGAVEAGATEAQLLARTVG DALYPGELLRTGEDARAELALADGSMVRVVENSLIKVGAIELMANLQRKVQLDLLRGTVETDAAPGGAGSIFEVRTRGAV AGVRGTRFRVSAQDDGTSRLETLEGKVALSAEQAEVEVSGGHGSRAKPGSPPEPPRPLLPAPTLVGPRGGAFATAPKVSW RTLEGAATYRVEVARTADFAASVQTYDSASPELAIPGPRQGKWFWRVMAVDGDGFVGFPSKIYAFDVQP
Sequences:
>Translated_389_residues MMRTAPWMMAVMLAGPPALAAQTQAPCGGLRFDSGRIVFGRPLAPQGAETDACLAHVAQALLARPAIRSVTVAAKLPDAE RLDGQGLAAAKRAADVLVAAGVPRTRVSAMAPPSVEGEPAQLQFAYVERPAQPAVARLRAASGAVEAGATEAQLLARTVG DALYPGELLRTGEDARAELALADGSMVRVVENSLIKVGAIELMANLQRKVQLDLLRGTVETDAAPGGAGSIFEVRTRGAV AGVRGTRFRVSAQDDGTSRLETLEGKVALSAEQAEVEVSGGHGSRAKPGSPPEPPRPLLPAPTLVGPRGGAFATAPKVSW RTLEGAATYRVEVARTADFAASVQTYDSASPELAIPGPRQGKWFWRVMAVDGDGFVGFPSKIYAFDVQP >Mature_389_residues MMRTAPWMMAVMLAGPPALAAQTQAPCGGLRFDSGRIVFGRPLAPQGAETDACLAHVAQALLARPAIRSVTVAAKLPDAE RLDGQGLAAAKRAADVLVAAGVPRTRVSAMAPPSVEGEPAQLQFAYVERPAQPAVARLRAASGAVEAGATEAQLLARTVG DALYPGELLRTGEDARAELALADGSMVRVVENSLIKVGAIELMANLQRKVQLDLLRGTVETDAAPGGAGSIFEVRTRGAV AGVRGTRFRVSAQDDGTSRLETLEGKVALSAEQAEVEVSGGHGSRAKPGSPPEPPRPLLPAPTLVGPRGGAFATAPKVSW RTLEGAATYRVEVARTADFAASVQTYDSASPELAIPGPRQGKWFWRVMAVDGDGFVGFPSKIYAFDVQP
Specific function: Unknown
COG id: COG4254
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40468; Mature: 40468
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRTAPWMMAVMLAGPPALAAQTQAPCGGLRFDSGRIVFGRPLAPQGAETDACLAHVAQA CCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCHHHHHHHHHHH LLARPAIRSVTVAAKLPDAERLDGQGLAAAKRAADVLVAAGVPRTRVSAMAPPSVEGEPA HHHCCCHHEEEEEEECCCHHHCCCCCHHHHHHHHHEEEECCCCHHHHHCCCCCCCCCCCC QLQFAYVERPAQPAVARLRAASGAVEAGATEAQLLARTVGDALYPGELLRTGEDARAELA EEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEE LADGSMVRVVENSLIKVGAIELMANLQRKVQLDLLRGTVETDAAPGGAGSIFEVRTRGAV EECCCEEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEE AGVRGTRFRVSAQDDGTSRLETLEGKVALSAEQAEVEVSGGHGSRAKPGSPPEPPRPLLP ECCCCCEEEEECCCCCCHHHHHHCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCC APTLVGPRGGAFATAPKVSWRTLEGAATYRVEVARTADFAASVQTYDSASPELAIPGPRQ CCCEECCCCCCEECCCCCEEEEECCCEEEEEEEEEHHHHHHHHHHCCCCCCCEECCCCCC GKWFWRVMAVDGDGFVGFPSKIYAFDVQP CCEEEEEEEECCCCCCCCCCEEEEEECCC >Mature Secondary Structure MMRTAPWMMAVMLAGPPALAAQTQAPCGGLRFDSGRIVFGRPLAPQGAETDACLAHVAQA CCCCCHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCHHHHHHHHHHH LLARPAIRSVTVAAKLPDAERLDGQGLAAAKRAADVLVAAGVPRTRVSAMAPPSVEGEPA HHHCCCHHEEEEEEECCCHHHCCCCCHHHHHHHHHEEEECCCCHHHHHCCCCCCCCCCCC QLQFAYVERPAQPAVARLRAASGAVEAGATEAQLLARTVGDALYPGELLRTGEDARAELA EEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEE LADGSMVRVVENSLIKVGAIELMANLQRKVQLDLLRGTVETDAAPGGAGSIFEVRTRGAV EECCCEEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCEE AGVRGTRFRVSAQDDGTSRLETLEGKVALSAEQAEVEVSGGHGSRAKPGSPPEPPRPLLP ECCCCCEEEEECCCCCCHHHHHHCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCC APTLVGPRGGAFATAPKVSWRTLEGAATYRVEVARTADFAASVQTYDSASPELAIPGPRQ CCCEECCCCCCEECCCCCEEEEECCCEEEEEEEEEHHHHHHHHHHCCCCCCCEECCCCCC GKWFWRVMAVDGDGFVGFPSKIYAFDVQP CCEEEEEEEECCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA