| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is mdmB [H]
Identifier: 108760012
GI number: 108760012
Start: 1227011
End: 1228198
Strand: Direct
Name: mdmB [H]
Synonym: MXAN_1049
Alternate gene names: 108760012
Gene position: 1227011-1228198 (Clockwise)
Preceding gene: 108759401
Following gene: 108762710
Centisome position: 13.42
GC content: 74.33
Gene sequence:
>1188_bases GTGAGCGGGAGCAGGGCCCTCGACGCGCTGACGGGGCTGCGCTTCGTCGCGGCCCTGCACGTCGTGTTGTTCCACTTCGC GGCGCCGTGTCTGGGCACGGCGCCAGAAGCGCTGCGGAGCTGGGTGGGCGCGGGTTATGCCGCGGTGGGCGTCTTCTTCG TCCTGTCCGGCTTCGTGCTCGCCTGGAACTACCTGGACGCGGACGGGCGCATGGAGACGTCGCCCAGGGCCTTCTGGGCC GCGCGCGTCGCCCGCGTGTACCCCGTCTACGTGCTGACGTTCCTCCTGTCCGCGCCCACCACCATCGCCGCGTCCGTGGC GGATAACGGCTGGAAGGTGGCCGCCGCGAAGCTCGCGGTGGGCGGGGTGGCGACGCTGGCGCTGCTCCAGGCCTGGGTTC CCCGGCTCGCGCTGTACTGGAATCCGCCGGGCTGGTCCGTGGCGGTGGAGGCCTGCTTCTACGGCCTCTTTCCCCGGCTG GCGAAGGGGCTGCCCCGGCTCAAGCCCGCGTGGCTCCCCGTGGCCCTGGGCGGCGCGTGGGTGCTGGGGTTGCTGCCGCC GCTGCTGTACCTGGCGCTCCTGCCGGACGGCCCGGGCCCCGTGGACGTGCATGCGTCGGGGCCCTGGCTGATGGCGCTCA AGTTCAACCCGCTGGCGCGGCTGCCGGAGTTCCTCTTCGGCGTCCTGCTGGGCTGGTGCTTCGTGCGCGAGCGCGCGGCG GGAGGGGCGAAGGGCTCCGGCGCGGTGCTGGCGGCGCTGGGGACGGCACTGCTGGTGGCGGCGGGCGCGGCGGGCTCGAG GGTGCCGTACCCGCTGATGCACAACGCCCTGCTGGCGCCCGCGTCGGGGCTGCTGGTGTACGGGCTGGCGCGGGGCGGAG GCGCCCTGGGCTGGCTGCTGTCACGGCCCACGCTGGTGAAGCTGGGAGGCGCCAGCTACGCGCTCTACCTGCTCCAGTAC CCGGTGTCGGAGGCGGCCAAGGGCCTGGGGGCTTGGGTGTCGCCCTGGGTGGAGCTGCGCACGCCCGAAGGACTGCTGGC CACCGTGTTGTTGCTGGGCGTGCCCGCGTCGCTGTGGGTGCACCGCGCCGTGGAGACACCGCTGCGCTCACGCATCCGCG CCGCGCTGACGCCCTGGGGGGAGGGGGCGTCGCGCGAGCCCGTGAAGCCGGTGGTGTCGGGGACCTGA
Upstream 100 bases:
>100_bases TGATGAAGTCGCCCGTCGTGTTCGACGGCCGCAACGTGTACGACCCGGCGCGCATGCGTGAGCTGGGCTTCACGTACTAC GGCATCGGCCGGCGGTAGCG
Downstream 100 bases:
>100_bases GCGGCGTGCGGGCGCCGTCAAGCGAGACGGGCGGCGTCCGGGGCACAGGCACCCGGAGCCTCCGGTCAGGTGGGCCGCCT CAGCGGGAGAGGCCGCAGGC
Product: acyltransferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MSGSRALDALTGLRFVAALHVVLFHFAAPCLGTAPEALRSWVGAGYAAVGVFFVLSGFVLAWNYLDADGRMETSPRAFWA ARVARVYPVYVLTFLLSAPTTIAASVADNGWKVAAAKLAVGGVATLALLQAWVPRLALYWNPPGWSVAVEACFYGLFPRL AKGLPRLKPAWLPVALGGAWVLGLLPPLLYLALLPDGPGPVDVHASGPWLMALKFNPLARLPEFLFGVLLGWCFVRERAA GGAKGSGAVLAALGTALLVAAGAAGSRVPYPLMHNALLAPASGLLVYGLARGGGALGWLLSRPTLVKLGGASYALYLLQY PVSEAAKGLGAWVSPWVELRTPEGLLATVLLLGVPASLWVHRAVETPLRSRIRAALTPWGEGASREPVKPVVSGT
Sequences:
>Translated_395_residues MSGSRALDALTGLRFVAALHVVLFHFAAPCLGTAPEALRSWVGAGYAAVGVFFVLSGFVLAWNYLDADGRMETSPRAFWA ARVARVYPVYVLTFLLSAPTTIAASVADNGWKVAAAKLAVGGVATLALLQAWVPRLALYWNPPGWSVAVEACFYGLFPRL AKGLPRLKPAWLPVALGGAWVLGLLPPLLYLALLPDGPGPVDVHASGPWLMALKFNPLARLPEFLFGVLLGWCFVRERAA GGAKGSGAVLAALGTALLVAAGAAGSRVPYPLMHNALLAPASGLLVYGLARGGGALGWLLSRPTLVKLGGASYALYLLQY PVSEAAKGLGAWVSPWVELRTPEGLLATVLLLGVPASLWVHRAVETPLRSRIRAALTPWGEGASREPVKPVVSGT >Mature_394_residues SGSRALDALTGLRFVAALHVVLFHFAAPCLGTAPEALRSWVGAGYAAVGVFFVLSGFVLAWNYLDADGRMETSPRAFWAA RVARVYPVYVLTFLLSAPTTIAASVADNGWKVAAAKLAVGGVATLALLQAWVPRLALYWNPPGWSVAVEACFYGLFPRLA KGLPRLKPAWLPVALGGAWVLGLLPPLLYLALLPDGPGPVDVHASGPWLMALKFNPLARLPEFLFGVLLGWCFVRERAAG GAKGSGAVLAALGTALLVAAGAAGSRVPYPLMHNALLAPASGLLVYGLARGGGALGWLLSRPTLVKLGGASYALYLLQYP VSEAAKGLGAWVSPWVELRTPEGLLATVLLLGVPASLWVHRAVETPLRSRIRAALTPWGEGASREPVKPVVSGT
Specific function: Catalyzes the acylation of the mycaminose sugar during midecamycin biosynthesis [H]
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002656 [H]
Pfam domain/function: PF01757 Acyl_transf_3 [H]
EC number: NA
Molecular weight: Translated: 41416; Mature: 41285
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSRALDALTGLRFVAALHVVLFHFAAPCLGTAPEALRSWVGAGYAAVGVFFVLSGFVL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH AWNYLDADGRMETSPRAFWAARVARVYPVYVLTFLLSAPTTIAASVADNGWKVAAAKLAV HHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEHHHHHHH GGVATLALLQAWVPRLALYWNPPGWSVAVEACFYGLFPRLAKGLPRLKPAWLPVALGGAW HHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHH VLGLLPPLLYLALLPDGPGPVDVHASGPWLMALKFNPLARLPEFLFGVLLGWCFVRERAA HHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHC GGAKGSGAVLAALGTALLVAAGAAGSRVPYPLMHNALLAPASGLLVYGLARGGGALGWLL CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHH SRPTLVKLGGASYALYLLQYPVSEAAKGLGAWVSPWVELRTPEGLLATVLLLGVPASLWV CCCCEEEECCCHHHHHHHHCCHHHHHHHCCHHHCCCEEECCCCHHHHHHHHHHCCHHHHH HRAVETPLRSRIRAALTPWGEGASREPVKPVVSGT HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SGSRALDALTGLRFVAALHVVLFHFAAPCLGTAPEALRSWVGAGYAAVGVFFVLSGFVL CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH AWNYLDADGRMETSPRAFWAARVARVYPVYVLTFLLSAPTTIAASVADNGWKVAAAKLAV HHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEHHHHHHH GGVATLALLQAWVPRLALYWNPPGWSVAVEACFYGLFPRLAKGLPRLKPAWLPVALGGAW HHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHH VLGLLPPLLYLALLPDGPGPVDVHASGPWLMALKFNPLARLPEFLFGVLLGWCFVRERAA HHHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHC GGAKGSGAVLAALGTALLVAAGAAGSRVPYPLMHNALLAPASGLLVYGLARGGGALGWLL CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHH SRPTLVKLGGASYALYLLQYPVSEAAKGLGAWVSPWVELRTPEGLLATVLLLGVPASLWV CCCCEEEECCCHHHHHHHHCCHHHHHHHCCHHHCCCEEECCCCHHHHHHHHHHCCHHHHH HRAVETPLRSRIRAALTPWGEGASREPVKPVVSGT HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1629172 [H]