| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is udg [H]
Identifier: 108759401
GI number: 108759401
Start: 1225710
End: 1227008
Strand: Direct
Name: udg [H]
Synonym: MXAN_1048
Alternate gene names: 108759401
Gene position: 1225710-1227008 (Clockwise)
Preceding gene: 108758608
Following gene: 108760012
Centisome position: 13.41
GC content: 66.44
Gene sequence:
>1299_bases ATGCGTATTGCCATCATCGGAACCGGCTACGTCGGACTGGTCGCGGGCACCTGTTTCGCGGACTCGGGTAACGACGTCAC GTGCGTGGACATCGACGAGCGGAAGATCCGCATGCTCCAGGCGGGCGAGGTGCCCATCTACGAGCCCGGCCTGGAGGAGC TCATCAAGAAGAACGTGCGCGAGAAGCGCCTGTTCTTCACCCGGGACCTGACGGAGGCCGTCACCAACGCCCAGGTCGTC TTCATCGCCGTGGGCACGCCGGAAGGTGAGAGCGGCGACGCCGACCTCCAGTACGTGCTGGCCGCCGCCGAGCAGATTGG CAAGGCGATGAAGCAGTACACGGTGGTGGTGGACAAGAGCACCGTGCCGGTGGGCACCGCGGACAAGGTGCGCGAGGCCA TCCGCAAGGTGACGGACATCGAGTTCGACGTCGTCTCCAACCCGGAGTTCCTCAAGGAAGGCGCCGCGCTGGACGACTTC CTCAAGCCCGACCGCGTCGTCATTGGCGTGGACTCCGAGCGCGCCCGCAAGGTGATGGCGGACCTGTACTCGCCCTTTGT GCGCACCGAGAACCCGGTGTTGTTCATGGACACGCGCTCGGCGGAGCTGACGAAGTACGCGGCCAACGCGATGCTGGCCA CGCGCATCTCCTTCATGAACGACATCGCCGCGCTCTGCGAGAAGGTGGGTGCGGACGTGGACTTCGTGCGCAAGGGCCTG GGGTCGGACAAGCGCATCGGCTATCCGTTCCTCTTCCCGGGCGTGGGCTACGGCGGCTCCTGCTTCCCCAAGGACGTGAA GGCGCTGGTGGCCACCGCGCGTGACTACGGCCTGGAGCTGGACCTGCTGCGCGCGGTGGAGCGCACCAACGAGCGCCAGA AGAAGCTGCTGGTGACCAAGGCGGCCAAGCACTACGGCTCGCTGGAGGGCCGCAAGTTCGGCGTGTGGGGTCTGGCCTTC AAGCCGAAGACGGACGACATGCGCGAGGCGCCGTCCATCGAGGTCATCGAGGGCCTCATCGGCAAGGGCGCCCAGGTGAT TGCGCACGACCCGGTGTCTCCGCACACGGCCAAGCGCGTCTTCGGTGATCGCATCCGCTACGCCTCCGTGCCCTACGAGG CGCTGGAGGGCGTGGACGGCCTCTTCGTGGTGACGGAGTGGAACGAGTTCCGCCACCCGGACTTCGAGCGCATGAAGACG CTGATGAAGTCGCCCGTCGTGTTCGACGGCCGCAACGTGTACGACCCGGCGCGCATGCGTGAGCTGGGCTTCACGTACTA CGGCATCGGCCGGCGGTAG
Upstream 100 bases:
>100_bases CGGCTGCTCACAGAGGAGCCCCAGTGACGGGGATGGGCTTTCTTTCGGACTCCCTCCCGGCGTATGAGTCCTGCAAGAGA CATTCACTGGGGCTCCCTCA
Downstream 100 bases:
>100_bases CGGTGAGCGGGAGCAGGGCCCTCGACGCGCTGACGGGGCTGCGCTTCGTCGCGGCCCTGCACGTCGTGTTGTTCCACTTC GCGGCGCCGTGTCTGGGCAC
Product: UDP-glucose 6-dehydrogenase
Products: NA
Alternate protein names: UDP-Glc dehydrogenase; UDP-GlcDH; UDPGDH [H]
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MRIAIIGTGYVGLVAGTCFADSGNDVTCVDIDERKIRMLQAGEVPIYEPGLEELIKKNVREKRLFFTRDLTEAVTNAQVV FIAVGTPEGESGDADLQYVLAAAEQIGKAMKQYTVVVDKSTVPVGTADKVREAIRKVTDIEFDVVSNPEFLKEGAALDDF LKPDRVVIGVDSERARKVMADLYSPFVRTENPVLFMDTRSAELTKYAANAMLATRISFMNDIAALCEKVGADVDFVRKGL GSDKRIGYPFLFPGVGYGGSCFPKDVKALVATARDYGLELDLLRAVERTNERQKKLLVTKAAKHYGSLEGRKFGVWGLAF KPKTDDMREAPSIEVIEGLIGKGAQVIAHDPVSPHTAKRVFGDRIRYASVPYEALEGVDGLFVVTEWNEFRHPDFERMKT LMKSPVVFDGRNVYDPARMRELGFTYYGIGRR
Sequences:
>Translated_432_residues MRIAIIGTGYVGLVAGTCFADSGNDVTCVDIDERKIRMLQAGEVPIYEPGLEELIKKNVREKRLFFTRDLTEAVTNAQVV FIAVGTPEGESGDADLQYVLAAAEQIGKAMKQYTVVVDKSTVPVGTADKVREAIRKVTDIEFDVVSNPEFLKEGAALDDF LKPDRVVIGVDSERARKVMADLYSPFVRTENPVLFMDTRSAELTKYAANAMLATRISFMNDIAALCEKVGADVDFVRKGL GSDKRIGYPFLFPGVGYGGSCFPKDVKALVATARDYGLELDLLRAVERTNERQKKLLVTKAAKHYGSLEGRKFGVWGLAF KPKTDDMREAPSIEVIEGLIGKGAQVIAHDPVSPHTAKRVFGDRIRYASVPYEALEGVDGLFVVTEWNEFRHPDFERMKT LMKSPVVFDGRNVYDPARMRELGFTYYGIGRR >Mature_432_residues MRIAIIGTGYVGLVAGTCFADSGNDVTCVDIDERKIRMLQAGEVPIYEPGLEELIKKNVREKRLFFTRDLTEAVTNAQVV FIAVGTPEGESGDADLQYVLAAAEQIGKAMKQYTVVVDKSTVPVGTADKVREAIRKVTDIEFDVVSNPEFLKEGAALDDF LKPDRVVIGVDSERARKVMADLYSPFVRTENPVLFMDTRSAELTKYAANAMLATRISFMNDIAALCEKVGADVDFVRKGL GSDKRIGYPFLFPGVGYGGSCFPKDVKALVATARDYGLELDLLRAVERTNERQKKLLVTKAAKHYGSLEGRKFGVWGLAF KPKTDDMREAPSIEVIEGLIGKGAQVIAHDPVSPHTAKRVFGDRIRYASVPYEALEGVDGLFVVTEWNEFRHPDFERMKT LMKSPVVFDGRNVYDPARMRELGFTYYGIGRR
Specific function: Unknown
COG id: COG1004
COG function: function code M; Predicted UDP-glucose 6-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507813, Length=462, Percent_Identity=36.3636363636364, Blast_Score=267, Evalue=2e-71, Organism=Homo sapiens, GI296040438, Length=368, Percent_Identity=36.4130434782609, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI296040443, Length=328, Percent_Identity=35.6707317073171, Blast_Score=186, Evalue=4e-47, Organism=Escherichia coli, GI1788340, Length=358, Percent_Identity=31.8435754189944, Blast_Score=157, Evalue=1e-39, Organism=Escherichia coli, GI48994968, Length=413, Percent_Identity=28.0871670702179, Blast_Score=132, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17560350, Length=465, Percent_Identity=35.4838709677419, Blast_Score=265, Evalue=5e-71, Organism=Drosophila melanogaster, GI17136908, Length=462, Percent_Identity=36.1471861471861, Blast_Score=279, Evalue=3e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR021157 - InterPro: IPR016040 - InterPro: IPR017476 - InterPro: IPR014027 - InterPro: IPR014026 - InterPro: IPR014028 - InterPro: IPR001732 [H]
Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]
EC number: =1.1.1.22 [H]
Molecular weight: Translated: 47908; Mature: 47908
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIAIIGTGYVGLVAGTCFADSGNDVTCVDIDERKIRMLQAGEVPIYEPGLEELIKKNVR CEEEEEECCHHHHHHHHEECCCCCCEEEEECCHHHHHHHCCCCCCCCCCCHHHHHHHHHH EKRLFFTRDLTEAVTNAQVVFIAVGTPEGESGDADLQYVLAAAEQIGKAMKQYTVVVDKS HHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECC TVPVGTADKVREAIRKVTDIEFDVVSNPEFLKEGAALDDFLKPDRVVIGVDSERARKVMA CCCCCCHHHHHHHHHHHHCCEEEECCCHHHHHCCCCHHHHCCCCEEEEECCHHHHHHHHH DLYSPFVRTENPVLFMDTRSAELTKYAANAMLATRISFMNDIAALCEKVGADVDFVRKGL HHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC GSDKRIGYPFLFPGVGYGGSCFPKDVKALVATARDYGLELDLLRAVERTNERQKKLLVTK CCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHH AAKHYGSLEGRKFGVWGLAFKPKTDDMREAPSIEVIEGLIGKGAQVIAHDPVSPHTAKRV HHHHHCCCCCCEEEEEEEEECCCCCHHHCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHH FGDRIRYASVPYEALEGVDGLFVVTEWNEFRHPDFERMKTLMKSPVVFDGRNVYDPARMR HHHHHEECCCCHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCEECCCCCCCHHHHH ELGFTYYGIGRR HHCCEEEECCCC >Mature Secondary Structure MRIAIIGTGYVGLVAGTCFADSGNDVTCVDIDERKIRMLQAGEVPIYEPGLEELIKKNVR CEEEEEECCHHHHHHHHEECCCCCCEEEEECCHHHHHHHCCCCCCCCCCCHHHHHHHHHH EKRLFFTRDLTEAVTNAQVVFIAVGTPEGESGDADLQYVLAAAEQIGKAMKQYTVVVDKS HHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECC TVPVGTADKVREAIRKVTDIEFDVVSNPEFLKEGAALDDFLKPDRVVIGVDSERARKVMA CCCCCCHHHHHHHHHHHHCCEEEECCCHHHHHCCCCHHHHCCCCEEEEECCHHHHHHHHH DLYSPFVRTENPVLFMDTRSAELTKYAANAMLATRISFMNDIAALCEKVGADVDFVRKGL HHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC GSDKRIGYPFLFPGVGYGGSCFPKDVKALVATARDYGLELDLLRAVERTNERQKKLLVTK CCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHH AAKHYGSLEGRKFGVWGLAFKPKTDDMREAPSIEVIEGLIGKGAQVIAHDPVSPHTAKRV HHHHHCCCCCCEEEEEEEEECCCCCHHHCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHH FGDRIRYASVPYEALEGVDGLFVVTEWNEFRHPDFERMKTLMKSPVVFDGRNVYDPARMR HHHHHEECCCCHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCEECCCCCCCHHHHH ELGFTYYGIGRR HHCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]