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The map label for this gene is nudC [H]

Identifier: 108759999

GI number: 108759999

Start: 537833

End: 538666

Strand: Reverse

Name: nudC [H]

Synonym: MXAN_0479

Alternate gene names: 108759999

Gene position: 538666-537833 (Counterclockwise)

Preceding gene: 108756890

Following gene: 108763752

Centisome position: 5.89

GC content: 70.26

Gene sequence:

>834_bases
GTGAGCTCCGCCCCCCTCTTCGTCCCCGACCACATCCCGCCCGACCGGCCCCGCGAGGGCGCCCTGCTCTTCCTCGCCCG
GGGCATGGACGTGCTCGTCCAGGAGCATGCGGACGGCGTCGCCATTCCCACCGGCGCGGCCTTCCCGGAGCTCGCCGCCG
CCGCGCACTACCTGGGAGCGCTGGACGGCGTGGACTGCTACGCGGCGGGGTTCGCCAAGGACTTCGTCCCGCCAGAGCGC
TACAAGGCCGTCGCCGCCCGCTCGCTCTACAAGCGCGTGGATGACGCCCGCTTCGCCGTGGCGGGCCGCGCGCTCGCGAT
TGTCGAGTGGGACCTCACCCACCGCTTCTGCGGCCGCTGCGGCGAACCCACCCTGTTGGTTCCGGGTGAGCGCGCCCGCC
GCTGCCCGGTGGACAAGACGCCCTTCTATCCCCGCATCGCCCCCGCCATCATCGTCCTCATCACCCGCGGCGACACGATG
CTGCTGGCGCACAACGCCCAATTTCCAGAGCCCATGTTCAGCACACTCGCCGGCTTCGCGGAGCCGGGCGAGTCGCTGGA
GGAGTGCGTGGCGCGCGAGGTGAAGGAGGAAGTCGGCATCGACGTGAAGAACATCCGCTACTTCGGCTCACAGCCGTGGC
CCTTCGGCCGCTCGCTGATGGTGGGCTTCACCGCCGAGTACGCGGGCGGCGACATCACCGTGGACCAGAAGGAAATCTCC
GAGGCCCACTGGTTCAGCCCGGACAACCTGCCGCGCATCCCCCCGAAGCTCAGCATCGCCCGGCAGCTCATCGACACCTT
CATCGAGCGCGTGAAGGGCCCCACCGCCCCTTGA

Upstream 100 bases:

>100_bases
GGTGGAACTCATCCAGAAGGACCGCTGAGCCCACCGCCGTCCCAGGCCCGCAGCGCACGCAACGCCTGCACACCCGGCCC
GGGCCCGTTAGTGTGGCCCC

Downstream 100 bases:

>100_bases
CCCCTCCTCAGGCGAGGCAACAGGCCGCGCTTGACCTGGCGCGGCAGGTTGGGGTTGAAGCACGCCTCCCTCGAATCAGC
GAAGAAGCCATGCCCGCAGC

Product: NUDIX family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MSSAPLFVPDHIPPDRPREGALLFLARGMDVLVQEHADGVAIPTGAAFPELAAAAHYLGALDGVDCYAAGFAKDFVPPER
YKAVAARSLYKRVDDARFAVAGRALAIVEWDLTHRFCGRCGEPTLLVPGERARRCPVDKTPFYPRIAPAIIVLITRGDTM
LLAHNAQFPEPMFSTLAGFAEPGESLEECVAREVKEEVGIDVKNIRYFGSQPWPFGRSLMVGFTAEYAGGDITVDQKEIS
EAHWFSPDNLPRIPPKLSIARQLIDTFIERVKGPTAP

Sequences:

>Translated_277_residues
MSSAPLFVPDHIPPDRPREGALLFLARGMDVLVQEHADGVAIPTGAAFPELAAAAHYLGALDGVDCYAAGFAKDFVPPER
YKAVAARSLYKRVDDARFAVAGRALAIVEWDLTHRFCGRCGEPTLLVPGERARRCPVDKTPFYPRIAPAIIVLITRGDTM
LLAHNAQFPEPMFSTLAGFAEPGESLEECVAREVKEEVGIDVKNIRYFGSQPWPFGRSLMVGFTAEYAGGDITVDQKEIS
EAHWFSPDNLPRIPPKLSIARQLIDTFIERVKGPTAP
>Mature_276_residues
SSAPLFVPDHIPPDRPREGALLFLARGMDVLVQEHADGVAIPTGAAFPELAAAAHYLGALDGVDCYAAGFAKDFVPPERY
KAVAARSLYKRVDDARFAVAGRALAIVEWDLTHRFCGRCGEPTLLVPGERARRCPVDKTPFYPRIAPAIIVLITRGDTML
LAHNAQFPEPMFSTLAGFAEPGESLEECVAREVKEEVGIDVKNIRYFGSQPWPFGRSLMVGFTAEYAGGDITVDQKEISE
AHWFSPDNLPRIPPKLSIARQLIDTFIERVKGPTAP

Specific function: Unknown

COG id: COG2816

COG function: function code L; NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI50593112, Length=201, Percent_Identity=36.318407960199, Blast_Score=138, Evalue=5e-33,
Organism=Homo sapiens, GI13899267, Length=198, Percent_Identity=33.8383838383838, Blast_Score=123, Evalue=2e-28,
Organism=Escherichia coli, GI48994995, Length=176, Percent_Identity=46.5909090909091, Blast_Score=168, Evalue=5e-43,
Organism=Caenorhabditis elegans, GI212645999, Length=195, Percent_Identity=30.7692307692308, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71986510, Length=195, Percent_Identity=30.7692307692308, Blast_Score=85, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6321371, Length=242, Percent_Identity=28.099173553719, Blast_Score=89, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 30329; Mature: 30198

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAPLFVPDHIPPDRPREGALLFLARGMDVLVQEHADGVAIPTGAAFPELAAAAHYLGA
CCCCCEECCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHC
LDGVDCYAAGFAKDFVPPERYKAVAARSLYKRVDDARFAVAGRALAIVEWDLTHRFCGRC
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHCCC
GEPTLLVPGERARRCPVDKTPFYPRIAPAIIVLITRGDTMLLAHNAQFPEPMFSTLAGFA
CCCCEEECCCHHHCCCCCCCCCCCHHCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHC
EPGESLEECVAREVKEEVGIDVKNIRYFGSQPWPFGRSLMVGFTAEYAGGDITVDQKEIS
CCCHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCCCEEEEEEEHHHCCCCEEECHHHHH
EAHWFSPDNLPRIPPKLSIARQLIDTFIERVKGPTAP
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SSAPLFVPDHIPPDRPREGALLFLARGMDVLVQEHADGVAIPTGAAFPELAAAAHYLGA
CCCCEECCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHC
LDGVDCYAAGFAKDFVPPERYKAVAARSLYKRVDDARFAVAGRALAIVEWDLTHRFCGRC
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHHHHHCCC
GEPTLLVPGERARRCPVDKTPFYPRIAPAIIVLITRGDTMLLAHNAQFPEPMFSTLAGFA
CCCCEEECCCHHHCCCCCCCCCCCHHCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHC
EPGESLEECVAREVKEEVGIDVKNIRYFGSQPWPFGRSLMVGFTAEYAGGDITVDQKEIS
CCCHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCCCEEEEEEEHHHCCCCEEECHHHHH
EAHWFSPDNLPRIPPKLSIARQLIDTFIERVKGPTAP
HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA