| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108759941
Identifier: 108759941
GI number: 108759941
Start: 2932341
End: 2934455
Strand: Direct
Name: 108759941
Synonym: MXAN_2520
Alternate gene names: NA
Gene position: 2932341-2934455 (Clockwise)
Preceding gene: 108759000
Following gene: 108758932
Centisome position: 32.08
GC content: 69.17
Gene sequence:
>2115_bases ATGCCTCCTCGTCCTCCTCCCTCTTCCCGTGCTGGCGCCGGCCGTTCCGGTGGTTCTGCGGGTGAGGACCCAGACTCCAT GAAGTCCCCCTCCCGGCGCCGTCCTGCGTCCGAGGACGAGGACTTCGCCGCTCCCGCATCCGGCGAGGACGGCTACCCAG ACGATGGGCCGCCCAACCCGGACCTCTATGGTGAGGAGTCACCGGGCCGCTCCCGCACGGGTGAGACGCGCGTGGCCTCC ATCGAGTCCGTGGAGGAGGAGCGGCGCTCCCGCGACGAGGACGAAGACGACAACGCGGACGCCACGCGCGCCGGACCGCC AGTGCAGATGCATGTGCTGGACGGCCCGGACAAGGGCCGCAAGAAGCGCTTCCAGAGCGTGCGGATGGTGGTGGGCCGCA ACAAGGACTGCGACTTCGTGCTGGAGGACCAGTCCGTGTCCCGCCGACACCTGGAGTTGGTGTACGGCCAGGCCGGCGTG GTGATGCGGGATCTGGGCAGCGTCAGTGGCACCCAGGTCAATGACCAGCGCGTGGACGAGTGTCTGCTGAAGCATGGAGA CGAAATCTCCATGGGCAAGACGCGCCTGCGCTTCGTGGACGAATCGGAGCAGATCAAGGAGCTGCGCGCCCAGGCGGAGG TCCGCGAGGCTGCGGAGAAGCGCGAGCGCGAGGCGGCCGCCCGCGAGGCGGAGGAGAAGCGGAAGAACCAGGCCGCCGCG CGTGGCAGCGAGGTGGATCCGAACGACCCGCGCTTCAACGAGGCCACCAACGCCAACTACAAGCTGCCTGACTCGCTCAA GGAGAACTCCGGCAGCAAGGGCGCGGTGGCCGTACCCCGGCCCCGTCCGCCCATCCGCAGCACGCCGACGCGTTCGAACA GCGGTGGACTGACGGGCAAGCAGAAGGCGCTCATCGGCGGCGGTGGCGCGTTGGTGGTGGTGCTGGTCATCGGGCTGATG CTGATTCCGTCCGGACCTCCGCCTCCGCCTCCGCCGGACCCGAAGGTGGAGAAGGCGAAGGTGTTGATGCAGCAGGCGCG CGAGTCCGTGCGCGCGGATGACTTCGCCAACGCCGTCCGCCTCGTCGGCGAGGCGGAGAAGCTGGTGCCGGGCATCGACG CGGACAACCTGGCCCGGGGCGCGCGCACGCAGTTGGAGGTGATGACCGCGCTGGATGCCGTCCGCACCCTCATCGAGGAG AAGCAGTTCGACGAGGCGCGCGCGAAGCTGGAGGCGACGCCGCAGGGCACGGCGAAGACGGATGACATCCGCCGCAAGCT GGCGACGGAGCTGGAGGAGAAGGACATCGCCTGGCGGCTCCAGCAGGTGGAGGAGTCCTTCGCCTCGCGCGACCCGGAGA CGATTCGCCCGCTCATCGCGCAGTTGCCGCCGTTGAACCGGCCGGCCTACGAGGTGAAGCTGACGGACCTGGAGGCCGAG CTGGCGAAGGAGGCCCAGGATGCGTCGCGCCGCACCCGCAACGCCAACGCCCGCGCGGCGGAGGTGGCCAAGGAGAAGCG CAAGGAGTTCATCGCCGAGGCCTTCACCGACGTGGAGCGCCGCTTCAACGGGGGGGACTACCAGCGCGCCGTCCTGGAGT GCGACCGGGTGATGGACAAGTACCGGGCGGACAAGGACGTGAAGGACCGGGCCCTGGCCCTCAAGCGTCTGATTCCCCAG TTCCGGCGCGCGCTGGAGGACGGGCAGAAAAAGCTGGATTCGAACTCGCTGGAGGCGGCGGCGAAGCCCCTGCGGCGCGC GGCGGAGCTGTACCGCCAGATTGGCTTCCGGGGCTCGTTGGGGAACACCATCGACGAACAGCTCGCGTCGTCATCGCTGG CGGCGGGGCAGAGCGCGCTGAAGAAGGGCGACCTGGGCGCGGCCGGCTCGCACTTCCGCGAGGCGCTGCGGCTCAACCCG GGTGACGGGCGGGCGCGTGAAGGACTGGAGAACCTGCAGAAGAAGGCGGAGGAGCTCTTCCTCCGGGCCTACATCCAGCG GGACAGGGATCCGAAGGCCGCGGCGGAGATGTTCAAGGTCGTCATCGAGACGGCCTCGGAAGGCTCCGACGTCAAGCGCA AGGCGGAGATGTATCTGAGCGAGCTCCAGCCGTGA
Upstream 100 bases:
>100_bases CAAGGGCCCCCGTTCTTTCCCTGATCCGCGGCCTGTCCGCATTCCCACCATGGAGACGGCGCTCTAAGATGTCCGGCGCT TCGAGACTGGAACCCACCCC
Downstream 100 bases:
>100_bases GTGGCGGCGGGCCGACCATGATTTGCCGGGGAGAAAAGGGATGAACGAGTCGTCGCTGCGTGAGCTCGGGATGGACCTCA TCGAGGAGCGCCAGTTCGAG
Product: FHA domain- TPR-repeat-containing protein
Products: NA
Alternate protein names: FHA Domain Containing Protein; FHA Domain- TPR-Repeat-Containing Protein; Fha Domain/Tetratricopeptide Repeat Protein; Sigma-54 Dependent Transcriptional Regulator Fis Family; Sigma-54 Dependent Trancsriptional Regulator; Signaling Protein
Number of amino acids: Translated: 704; Mature: 703
Protein sequence:
>704_residues MPPRPPPSSRAGAGRSGGSAGEDPDSMKSPSRRRPASEDEDFAAPASGEDGYPDDGPPNPDLYGEESPGRSRTGETRVAS IESVEEERRSRDEDEDDNADATRAGPPVQMHVLDGPDKGRKKRFQSVRMVVGRNKDCDFVLEDQSVSRRHLELVYGQAGV VMRDLGSVSGTQVNDQRVDECLLKHGDEISMGKTRLRFVDESEQIKELRAQAEVREAAEKREREAAAREAEEKRKNQAAA RGSEVDPNDPRFNEATNANYKLPDSLKENSGSKGAVAVPRPRPPIRSTPTRSNSGGLTGKQKALIGGGGALVVVLVIGLM LIPSGPPPPPPPDPKVEKAKVLMQQARESVRADDFANAVRLVGEAEKLVPGIDADNLARGARTQLEVMTALDAVRTLIEE KQFDEARAKLEATPQGTAKTDDIRRKLATELEEKDIAWRLQQVEESFASRDPETIRPLIAQLPPLNRPAYEVKLTDLEAE LAKEAQDASRRTRNANARAAEVAKEKRKEFIAEAFTDVERRFNGGDYQRAVLECDRVMDKYRADKDVKDRALALKRLIPQ FRRALEDGQKKLDSNSLEAAAKPLRRAAELYRQIGFRGSLGNTIDEQLASSSLAAGQSALKKGDLGAAGSHFREALRLNP GDGRAREGLENLQKKAEELFLRAYIQRDRDPKAAAEMFKVVIETASEGSDVKRKAEMYLSELQP
Sequences:
>Translated_704_residues MPPRPPPSSRAGAGRSGGSAGEDPDSMKSPSRRRPASEDEDFAAPASGEDGYPDDGPPNPDLYGEESPGRSRTGETRVAS IESVEEERRSRDEDEDDNADATRAGPPVQMHVLDGPDKGRKKRFQSVRMVVGRNKDCDFVLEDQSVSRRHLELVYGQAGV VMRDLGSVSGTQVNDQRVDECLLKHGDEISMGKTRLRFVDESEQIKELRAQAEVREAAEKREREAAAREAEEKRKNQAAA RGSEVDPNDPRFNEATNANYKLPDSLKENSGSKGAVAVPRPRPPIRSTPTRSNSGGLTGKQKALIGGGGALVVVLVIGLM LIPSGPPPPPPPDPKVEKAKVLMQQARESVRADDFANAVRLVGEAEKLVPGIDADNLARGARTQLEVMTALDAVRTLIEE KQFDEARAKLEATPQGTAKTDDIRRKLATELEEKDIAWRLQQVEESFASRDPETIRPLIAQLPPLNRPAYEVKLTDLEAE LAKEAQDASRRTRNANARAAEVAKEKRKEFIAEAFTDVERRFNGGDYQRAVLECDRVMDKYRADKDVKDRALALKRLIPQ FRRALEDGQKKLDSNSLEAAAKPLRRAAELYRQIGFRGSLGNTIDEQLASSSLAAGQSALKKGDLGAAGSHFREALRLNP GDGRAREGLENLQKKAEELFLRAYIQRDRDPKAAAEMFKVVIETASEGSDVKRKAEMYLSELQP >Mature_703_residues PPRPPPSSRAGAGRSGGSAGEDPDSMKSPSRRRPASEDEDFAAPASGEDGYPDDGPPNPDLYGEESPGRSRTGETRVASI ESVEEERRSRDEDEDDNADATRAGPPVQMHVLDGPDKGRKKRFQSVRMVVGRNKDCDFVLEDQSVSRRHLELVYGQAGVV MRDLGSVSGTQVNDQRVDECLLKHGDEISMGKTRLRFVDESEQIKELRAQAEVREAAEKREREAAAREAEEKRKNQAAAR GSEVDPNDPRFNEATNANYKLPDSLKENSGSKGAVAVPRPRPPIRSTPTRSNSGGLTGKQKALIGGGGALVVVLVIGLML IPSGPPPPPPPDPKVEKAKVLMQQARESVRADDFANAVRLVGEAEKLVPGIDADNLARGARTQLEVMTALDAVRTLIEEK QFDEARAKLEATPQGTAKTDDIRRKLATELEEKDIAWRLQQVEESFASRDPETIRPLIAQLPPLNRPAYEVKLTDLEAEL AKEAQDASRRTRNANARAAEVAKEKRKEFIAEAFTDVERRFNGGDYQRAVLECDRVMDKYRADKDVKDRALALKRLIPQF RRALEDGQKKLDSNSLEAAAKPLRRAAELYRQIGFRGSLGNTIDEQLASSSLAAGQSALKKGDLGAAGSHFREALRLNPG DGRAREGLENLQKKAEELFLRAYIQRDRDPKAAAEMFKVVIETASEGSDVKRKAEMYLSELQP
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77424; Mature: 77293
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: PS50006 FHA_DOMAIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPRPPPSSRAGAGRSGGSAGEDPDSMKSPSRRRPASEDEDFAAPASGEDGYPDDGPPNP CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DLYGEESPGRSRTGETRVASIESVEEERRSRDEDEDDNADATRAGPPVQMHVLDGPDKGR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHH KKRFQSVRMVVGRNKDCDFVLEDQSVSRRHLELVYGQAGVVMRDLGSVSGTQVNDQRVDE HHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHH CLLKHGDEISMGKTRLRFVDESEQIKELRAQAEVREAAEKREREAAAREAEEKRKNQAAA HHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGSEVDPNDPRFNEATNANYKLPDSLKENSGSKGAVAVPRPRPPIRSTPTRSNSGGLTGK CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC QKALIGGGGALVVVLVIGLMLIPSGPPPPPPPDPKVEKAKVLMQQARESVRADDFANAVR CCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LVGEAEKLVPGIDADNLARGARTQLEVMTALDAVRTLIEEKQFDEARAKLEATPQGTAKT HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH DDIRRKLATELEEKDIAWRLQQVEESFASRDPETIRPLIAQLPPLNRPAYEVKLTDLEAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEHHHHH LAKEAQDASRRTRNANARAAEVAKEKRKEFIAEAFTDVERRFNGGDYQRAVLECDRVMDK HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH YRADKDVKDRALALKRLIPQFRRALEDGQKKLDSNSLEAAAKPLRRAAELYRQIGFRGSL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC GNTIDEQLASSSLAAGQSALKKGDLGAAGSHFREALRLNPGDGRAREGLENLQKKAEELF CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LRAYIQRDRDPKAAAEMFKVVIETASEGSDVKRKAEMYLSELQP HHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure PPRPPPSSRAGAGRSGGSAGEDPDSMKSPSRRRPASEDEDFAAPASGEDGYPDDGPPNP CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DLYGEESPGRSRTGETRVASIESVEEERRSRDEDEDDNADATRAGPPVQMHVLDGPDKGR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCHHH KKRFQSVRMVVGRNKDCDFVLEDQSVSRRHLELVYGQAGVVMRDLGSVSGTQVNDQRVDE HHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHH CLLKHGDEISMGKTRLRFVDESEQIKELRAQAEVREAAEKREREAAAREAEEKRKNQAAA HHHHCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RGSEVDPNDPRFNEATNANYKLPDSLKENSGSKGAVAVPRPRPPIRSTPTRSNSGGLTGK CCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC QKALIGGGGALVVVLVIGLMLIPSGPPPPPPPDPKVEKAKVLMQQARESVRADDFANAVR CCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LVGEAEKLVPGIDADNLARGARTQLEVMTALDAVRTLIEEKQFDEARAKLEATPQGTAKT HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH DDIRRKLATELEEKDIAWRLQQVEESFASRDPETIRPLIAQLPPLNRPAYEVKLTDLEAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEEEHHHHH LAKEAQDASRRTRNANARAAEVAKEKRKEFIAEAFTDVERRFNGGDYQRAVLECDRVMDK HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH YRADKDVKDRALALKRLIPQFRRALEDGQKKLDSNSLEAAAKPLRRAAELYRQIGFRGSL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC GNTIDEQLASSSLAAGQSALKKGDLGAAGSHFREALRLNPGDGRAREGLENLQKKAEELF CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LRAYIQRDRDPKAAAEMFKVVIETASEGSDVKRKAEMYLSELQP HHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA