| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is crt [H]
Identifier: 108759739
GI number: 108759739
Start: 3149390
End: 3150472
Strand: Direct
Name: crt [H]
Synonym: MXAN_2698
Alternate gene names: 108759739
Gene position: 3149390-3150472 (Clockwise)
Preceding gene: 108759222
Following gene: 108758734
Centisome position: 34.46
GC content: 71.47
Gene sequence:
>1083_bases ATGACGGACGACCTTCTGCTCGAGACGCGTGGCGCGGTAGGCGTGGTGACCCTGAACCGGCCCAAGGCCCTGAACGCGCT GAACCTGGGCATGTGCCGAAAGCTGCACCCGGCGCTCGACGCCTGGGCGGCGGACCCGTCCATTCAGGCCGTGGTCATCC GGGGGGCTGGCGGCCGAGCCTTCTGCGCGGGCGGAGACGTACGCGCGGTGGCGCTGTCGGTGGGGGACGCGTCCGCTGAA GCGAAGGAGCGGGTGTCGCGGGAGTTCTTCCGCGCCGAGTACGGGCTGAACCACCGCATCCACTACTTCGGCAAGCCGTT CATCGCGCTGGTGGACGGGGTCTGCATGGGCGGCGGGCTGGGCCTGTCGATTCACGGCACCCACCGGGTCGTCACCGAGA AGCTGGTGCTGGCCATGCCGGAGACGGCCATCGGGCTCTTCCCGGATGTGGGCGGCGGCTGGTTCCTGCCGCGCTTCCCG GGTGAGTCGGGCACGTACCTGGGCCTCACGGGGGCCCGGTGCGGCGCGGCGGACGCGATGTGGCTGGGCTACGCCACGCA CCACGTGGAGTCCGCGCGGCTGGAGGCGGTACTGGACGCGTTGGTGGGGGCGCCCTGGGGCACCGGCGCGGCGAGCACGG TGGTGGACACGGTGCTGGCCGGCTTCCACGCGGACGCGGGCACGTCGCCACTGGGGGTGCAGCGCGCCGCCATCGACCGG TGCTTCGCGGCCGAGCGCGTGGACGACATCCAGCAGGCGCTGGAGCTGGAGGGCACGCCGTGGGCCCAGGAGACGTGGGC CACGTTGCTTCACATGTGCCCGGCCAGCTTGAAGGTGACGCTGCGCCAGCTCCGGATGGGGCGCACCCGCGACTACGACG AGATGGCCAACGTGGAGTACCGGCTCAGCCAGTCGATGACGGCACGGCCGGACTTCCGTGAGGGCATCCGCGCGGTGCTC GTGGACAAGGACAACAAGCCGCACTGGCGGCCCTCCACGCTGGCGGAAGTCACCGAAGGCATGGTGGAGGCGCTCTTCGC GCCGCTGCTTCACGACACGTGGAAGGTTCCGGCGCGCGGGTAG
Upstream 100 bases:
>100_bases GCGCCAGTGCGGAGGTCATGCGTTCCCCATAGCGCGTCTGCTCCCGCGGCGGGCCAATGAATCCACCCAAGGGGCTGCTC GCCTGATATCCCCGGCCGCC
Downstream 100 bases:
>100_bases GGGCTGTTGCTAGAGGTCCTCGTCGCTGAGGACGGTGATGTCCTTCGCGCGAAGTAGCGCCGTGGTGATGCCTTCGCCCG CGCGGAGCTGGCCGGACTCG
Product: enoyl-CoA hydratase/isomerase family protein
Products: NA
Alternate protein names: Crotonase [H]
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MTDDLLLETRGAVGVVTLNRPKALNALNLGMCRKLHPALDAWAADPSIQAVVIRGAGGRAFCAGGDVRAVALSVGDASAE AKERVSREFFRAEYGLNHRIHYFGKPFIALVDGVCMGGGLGLSIHGTHRVVTEKLVLAMPETAIGLFPDVGGGWFLPRFP GESGTYLGLTGARCGAADAMWLGYATHHVESARLEAVLDALVGAPWGTGAASTVVDTVLAGFHADAGTSPLGVQRAAIDR CFAAERVDDIQQALELEGTPWAQETWATLLHMCPASLKVTLRQLRMGRTRDYDEMANVEYRLSQSMTARPDFREGIRAVL VDKDNKPHWRPSTLAEVTEGMVEALFAPLLHDTWKVPARG
Sequences:
>Translated_360_residues MTDDLLLETRGAVGVVTLNRPKALNALNLGMCRKLHPALDAWAADPSIQAVVIRGAGGRAFCAGGDVRAVALSVGDASAE AKERVSREFFRAEYGLNHRIHYFGKPFIALVDGVCMGGGLGLSIHGTHRVVTEKLVLAMPETAIGLFPDVGGGWFLPRFP GESGTYLGLTGARCGAADAMWLGYATHHVESARLEAVLDALVGAPWGTGAASTVVDTVLAGFHADAGTSPLGVQRAAIDR CFAAERVDDIQQALELEGTPWAQETWATLLHMCPASLKVTLRQLRMGRTRDYDEMANVEYRLSQSMTARPDFREGIRAVL VDKDNKPHWRPSTLAEVTEGMVEALFAPLLHDTWKVPARG >Mature_359_residues TDDLLLETRGAVGVVTLNRPKALNALNLGMCRKLHPALDAWAADPSIQAVVIRGAGGRAFCAGGDVRAVALSVGDASAEA KERVSREFFRAEYGLNHRIHYFGKPFIALVDGVCMGGGLGLSIHGTHRVVTEKLVLAMPETAIGLFPDVGGGWFLPRFPG ESGTYLGLTGARCGAADAMWLGYATHHVESARLEAVLDALVGAPWGTGAASTVVDTVLAGFHADAGTSPLGVQRAAIDRC FAAERVDDIQQALELEGTPWAQETWATLLHMCPASLKVTLRQLRMGRTRDYDEMANVEYRLSQSMTARPDFREGIRAVLV DKDNKPHWRPSTLAEVTEGMVEALFAPLLHDTWKVPARG
Specific function: Catalyzes The Reversible Dehydration Of L-Carnitinyl-CoA To Crotobetainyl-CoA. [C]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI37594471, Length=354, Percent_Identity=44.3502824858757, Blast_Score=311, Evalue=6e-85, Organism=Homo sapiens, GI37594469, Length=310, Percent_Identity=43.8709677419355, Blast_Score=270, Evalue=1e-72, Organism=Homo sapiens, GI194097323, Length=202, Percent_Identity=36.6336633663366, Blast_Score=89, Evalue=7e-18, Organism=Homo sapiens, GI20127408, Length=190, Percent_Identity=30, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI68989263, Length=189, Percent_Identity=28.042328042328, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI221142681, Length=195, Percent_Identity=30.2564102564103, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1787659, Length=185, Percent_Identity=30.8108108108108, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1788682, Length=205, Percent_Identity=30.2439024390244, Blast_Score=70, Evalue=3e-13, Organism=Caenorhabditis elegans, GI25144160, Length=351, Percent_Identity=46.4387464387464, Blast_Score=317, Evalue=7e-87, Organism=Caenorhabditis elegans, GI25144157, Length=351, Percent_Identity=46.4387464387464, Blast_Score=317, Evalue=9e-87, Organism=Caenorhabditis elegans, GI25144276, Length=160, Percent_Identity=32.5, Blast_Score=85, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17508951, Length=160, Percent_Identity=32.5, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17508953, Length=160, Percent_Identity=32.5, Blast_Score=84, Evalue=9e-17, Organism=Caenorhabditis elegans, GI25145438, Length=259, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17540714, Length=236, Percent_Identity=27.9661016949153, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17558304, Length=181, Percent_Identity=28.7292817679558, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17536985, Length=185, Percent_Identity=30.2702702702703, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17534483, Length=191, Percent_Identity=27.7486910994764, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17554946, Length=172, Percent_Identity=34.3023255813954, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6320241, Length=354, Percent_Identity=33.0508474576271, Blast_Score=176, Evalue=6e-45, Organism=Drosophila melanogaster, GI28571730, Length=338, Percent_Identity=44.0828402366864, Blast_Score=286, Evalue=1e-77, Organism=Drosophila melanogaster, GI28571729, Length=338, Percent_Identity=44.0828402366864, Blast_Score=286, Evalue=1e-77, Organism=Drosophila melanogaster, GI20129971, Length=185, Percent_Identity=35.6756756756757, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI24653477, Length=185, Percent_Identity=35.6756756756757, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI24653139, Length=229, Percent_Identity=27.9475982532751, Blast_Score=73, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.55 [H]
Molecular weight: Translated: 38708; Mature: 38577
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDDLLLETRGAVGVVTLNRPKALNALNLGMCRKLHPALDAWAADPSIQAVVIRGAGGRA CCCCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEE FCAGGDVRAVALSVGDASAEAKERVSREFFRAEYGLNHRIHYFGKPFIALVDGVCMGGGL EECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCC GLSIHGTHRVVTEKLVLAMPETAIGLFPDVGGGWFLPRFPGESGTYLGLTGARCGAADAM EEEECCCHHHHHHHHHHHCCCHHHCCCCCCCCCEECCCCCCCCCCEEEECCCCCCCCHHH WLGYATHHVESARLEAVLDALVGAPWGTGAASTVVDTVLAGFHADAGTSPLGVQRAAIDR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH CFAAERVDDIQQALELEGTPWAQETWATLLHMCPASLKVTLRQLRMGRTRDYDEMANVEY HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHCCHH RLSQSMTARPDFREGIRAVLVDKDNKPHWRPSTLAEVTEGMVEALFAPLLHDTWKVPARG HHCCCCCCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TDDLLLETRGAVGVVTLNRPKALNALNLGMCRKLHPALDAWAADPSIQAVVIRGAGGRA CCCCEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEE FCAGGDVRAVALSVGDASAEAKERVSREFFRAEYGLNHRIHYFGKPFIALVDGVCMGGGL EECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCC GLSIHGTHRVVTEKLVLAMPETAIGLFPDVGGGWFLPRFPGESGTYLGLTGARCGAADAM EEEECCCHHHHHHHHHHHCCCHHHCCCCCCCCCEECCCCCCCCCCEEEECCCCCCCCHHH WLGYATHHVESARLEAVLDALVGAPWGTGAASTVVDTVLAGFHADAGTSPLGVQRAAIDR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH CFAAERVDDIQQALELEGTPWAQETWATLLHMCPASLKVTLRQLRMGRTRDYDEMANVEY HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHCCHH RLSQSMTARPDFREGIRAVLVDKDNKPHWRPSTLAEVTEGMVEALFAPLLHDTWKVPARG HHCCCCCCCCCHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8655474; 11466286 [H]