| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is luxQ [H]
Identifier: 108759725
GI number: 108759725
Start: 277754
End: 279280
Strand: Reverse
Name: luxQ [H]
Synonym: MXAN_0229
Alternate gene names: 108759725
Gene position: 279280-277754 (Counterclockwise)
Preceding gene: 108759989
Following gene: 108759887
Centisome position: 3.06
GC content: 69.88
Gene sequence:
>1527_bases GTGGGTGAGCCCCATCCAGCCACCGTCCTCAACGTCAACGACGACGACGCCAACCGATACCTCGTCAACCGGCTGCTCTC GCTGGCGGGATACAACGTGGTGGAGGCGGCCACCGGCATGGGCGCGTTGCTGATGGCGCAGCAACACCGCCCGGACGTCA TCATCCTCGACGTGAAGCTGCCGGACATCAGCGGCTACGAGGTCTGCGAGCGGCTGCGCGCCAATCCCCAGACCGCGGCC ATGGCGGTGCTGCACACCTCCGCCACATTCGTCACCTCCGACAAGAAGGTGCGCGGCCTGGACGGCGGCGCGGACGCCTA CCTCACCCAGCCCTTCGAGGGCGCGGAGCTCATCGCCACGGTGAAGTCGCTGTTGCGCCTGCGCCACGCGGAGCAGGTGG CGCGCCAACGCGCCAACGCGCTGGCGGAGATGGACCGCCGCAAGGACGAGTTCCTGGCCATGCTGGGGCACGAGCTGCGC AACCCGCTGGCCGCCATCATGACAGCCATTGGCATCCTGGAGCGCAGGCCCACCAGCGATGACAAGGAAGCGCGGATGCG CGGCATCATCCAACGCCAGACAAACCACTTGGCGCGGCTGGTGGATGACCTGCTCGACGTCAGCCGCATCACCCGCGACA AGGTGGAGCTGCGCCCCGGCAGCGTGGACCTGGTGCCCGTGCTGCGGCAGGTGCTCCAAATCGTGCAGCCCATGGCGGAT TCGCGTGGGTTGGGTTTGGACGTCTCGCTGCCTTCCGGTCCGCTCTGGCTGCAGGCGGATGCCACGCGGTTGGAGCAGGT CTTCACCAACCTGCTCGACAACGCCATCAAGTACACCGACGCGGGTGGCGTCCACCTGCGCGCGGAACAGGAAGGCGTGG GCGGCGCGGCCCAGGCGGTGGTGCGGGTGAAGGACTCTGGCATCGGCATCCCGCCGGAGGTGCTGCCGCACATCTTCGAG CTGTTCGCGCAGGCGGACACCTCGCTGGAGCGCTCGCGCGGCGGCCTGGGTATTGGCCTGACGCTGGTGCGCAAGCTGAT CCAGCTCCACGGCGGCGAGGTGACGGCGCGAAGCAACGGCCCCGGCCACGGCAGCGAGTTCGTGGTGAAGCTGCCCCTGG ACCACACGATGGGCAAGTCCGCGCCCGCGCGCGACGCGGTGGACCTCCGCCGCGGCCGGCGCGTCCTGGTGGTGGAGGAC AACTCGGACGCGCGTCAGGCCATGCGCGACCTGCTGGAGCTGTGGGGCCACCAGGTGGCGGTGGCGCCGGACGGCCTCCA GGGCGTGGCGCTCGCGATGGCGCAGCCGCCCGAGCTGGCGCTGGTGGACATCGGCCTGCCAGGGTTGGACGGATACCGGG TGGCGCAGACGCTGCGCGCCCAGGTGGGCAACGGCATCCGGCTGGTGGCCATGACGGGCTACGGCAGCCCCCATGGACGG GACCAGGCACTGCGCGCCGGGTTCGACCGGCATCTGGTCAAGCCCGTGAAGCCTGACGAGCTGGACCGAATCCTCTCCGA GCTGTGA
Upstream 100 bases:
>100_bases AAGCACACGCTGAGCCGCGAGGTGGCCATCACCCGCATCCGGGACGCACTGTCCAAGGCCGGCCTGGGCTCCCAAGCGTT GCCGCAGGAGGCAAGCCGCC
Downstream 100 bases:
>100_bases GGGATTGAAGCGGCGGAGGCTCAGCGGCGGTTCAGCGCGTTGGCCACCAGCCCCAACAGCTTCACCTTCGCGGGCTCCAG CGGACGCACGGTGCGCAGCA
Product: sensor histidine kinase/response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 508; Mature: 507
Protein sequence:
>508_residues MGEPHPATVLNVNDDDANRYLVNRLLSLAGYNVVEAATGMGALLMAQQHRPDVIILDVKLPDISGYEVCERLRANPQTAA MAVLHTSATFVTSDKKVRGLDGGADAYLTQPFEGAELIATVKSLLRLRHAEQVARQRANALAEMDRRKDEFLAMLGHELR NPLAAIMTAIGILERRPTSDDKEARMRGIIQRQTNHLARLVDDLLDVSRITRDKVELRPGSVDLVPVLRQVLQIVQPMAD SRGLGLDVSLPSGPLWLQADATRLEQVFTNLLDNAIKYTDAGGVHLRAEQEGVGGAAQAVVRVKDSGIGIPPEVLPHIFE LFAQADTSLERSRGGLGIGLTLVRKLIQLHGGEVTARSNGPGHGSEFVVKLPLDHTMGKSAPARDAVDLRRGRRVLVVED NSDARQAMRDLLELWGHQVAVAPDGLQGVALAMAQPPELALVDIGLPGLDGYRVAQTLRAQVGNGIRLVAMTGYGSPHGR DQALRAGFDRHLVKPVKPDELDRILSEL
Sequences:
>Translated_508_residues MGEPHPATVLNVNDDDANRYLVNRLLSLAGYNVVEAATGMGALLMAQQHRPDVIILDVKLPDISGYEVCERLRANPQTAA MAVLHTSATFVTSDKKVRGLDGGADAYLTQPFEGAELIATVKSLLRLRHAEQVARQRANALAEMDRRKDEFLAMLGHELR NPLAAIMTAIGILERRPTSDDKEARMRGIIQRQTNHLARLVDDLLDVSRITRDKVELRPGSVDLVPVLRQVLQIVQPMAD SRGLGLDVSLPSGPLWLQADATRLEQVFTNLLDNAIKYTDAGGVHLRAEQEGVGGAAQAVVRVKDSGIGIPPEVLPHIFE LFAQADTSLERSRGGLGIGLTLVRKLIQLHGGEVTARSNGPGHGSEFVVKLPLDHTMGKSAPARDAVDLRRGRRVLVVED NSDARQAMRDLLELWGHQVAVAPDGLQGVALAMAQPPELALVDIGLPGLDGYRVAQTLRAQVGNGIRLVAMTGYGSPHGR DQALRAGFDRHLVKPVKPDELDRILSEL >Mature_507_residues GEPHPATVLNVNDDDANRYLVNRLLSLAGYNVVEAATGMGALLMAQQHRPDVIILDVKLPDISGYEVCERLRANPQTAAM AVLHTSATFVTSDKKVRGLDGGADAYLTQPFEGAELIATVKSLLRLRHAEQVARQRANALAEMDRRKDEFLAMLGHELRN PLAAIMTAIGILERRPTSDDKEARMRGIIQRQTNHLARLVDDLLDVSRITRDKVELRPGSVDLVPVLRQVLQIVQPMADS RGLGLDVSLPSGPLWLQADATRLEQVFTNLLDNAIKYTDAGGVHLRAEQEGVGGAAQAVVRVKDSGIGIPPEVLPHIFEL FAQADTSLERSRGGLGIGLTLVRKLIQLHGGEVTARSNGPGHGSEFVVKLPLDHTMGKSAPARDAVDLRRGRRVLVVEDN SDARQAMRDLLELWGHQVAVAPDGLQGVALAMAQPPELALVDIGLPGLDGYRVAQTLRAQVGNGIRLVAMTGYGSPHGRD QALRAGFDRHLVKPVKPDELDRILSEL
Specific function: At low cell density, in absence of AI-2 (autoinducer 2), luxQ has a kinase activity and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is t
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI145693157, Length=288, Percent_Identity=30.5555555555556, Blast_Score=140, Evalue=2e-34, Organism=Escherichia coli, GI87081816, Length=407, Percent_Identity=30.958230958231, Blast_Score=140, Evalue=2e-34, Organism=Escherichia coli, GI1788713, Length=368, Percent_Identity=27.445652173913, Blast_Score=139, Evalue=3e-34, Organism=Escherichia coli, GI1789149, Length=298, Percent_Identity=32.2147651006711, Blast_Score=135, Evalue=4e-33, Organism=Escherichia coli, GI48994928, Length=373, Percent_Identity=31.3672922252011, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI1788393, Length=252, Percent_Identity=30.952380952381, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1786912, Length=260, Percent_Identity=31.5384615384615, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1790346, Length=239, Percent_Identity=29.7071129707113, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI1787894, Length=248, Percent_Identity=29.4354838709677, Blast_Score=89, Evalue=9e-19, Organism=Escherichia coli, GI1790436, Length=267, Percent_Identity=29.2134831460674, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1786783, Length=227, Percent_Identity=26.8722466960352, Blast_Score=82, Evalue=9e-17, Organism=Escherichia coli, GI1788549, Length=239, Percent_Identity=28.4518828451883, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790861, Length=215, Percent_Identity=34.4186046511628, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1786600, Length=232, Percent_Identity=25.8620689655172, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI87082128, Length=238, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI87082012, Length=122, Percent_Identity=34.4262295081967, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1786911, Length=128, Percent_Identity=41.40625, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1786784, Length=118, Percent_Identity=36.4406779661017, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI1790860, Length=120, Percent_Identity=39.1666666666667, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1786599, Length=118, Percent_Identity=34.7457627118644, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1788279, Length=228, Percent_Identity=25, Blast_Score=63, Evalue=4e-11, Organism=Escherichia coli, GI1789809, Length=220, Percent_Identity=29.5454545454545, Blast_Score=62, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR015387 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 - ProDom: PD142495 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF09308 LuxQ-periplasm; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 55107; Mature: 54976
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEPHPATVLNVNDDDANRYLVNRLLSLAGYNVVEAATGMGALLMAQQHRPDVIILDVKL CCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHCCCCCEEEEEEEC PDISGYEVCERLRANPQTAAMAVLHTSATFVTSDKKVRGLDGGADAYLTQPFEGAELIAT CCCCHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCEECCCCCCCCEEECCCCCHHHHHH VKSLLRLRHAEQVARQRANALAEMDRRKDEFLAMLGHELRNPLAAIMTAIGILERRPTSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DKEARMRGIIQRQTNHLARLVDDLLDVSRITRDKVELRPGSVDLVPVLRQVLQIVQPMAD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCC SRGLGLDVSLPSGPLWLQADATRLEQVFTNLLDNAIKYTDAGGVHLRAEQEGVGGAAQAV CCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCHHHHEE VRVKDSGIGIPPEVLPHIFELFAQADTSLERSRGGLGIGLTLVRKLIQLHGGEVTARSNG EEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCEEHHHHHHHHHHHCCCEEEECCCC PGHGSEFVVKLPLDHTMGKSAPARDAVDLRRGRRVLVVEDNSDARQAMRDLLELWGHQVA CCCCCCEEEEECCCCCCCCCCCCCHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCEEE VAPDGLQGVALAMAQPPELALVDIGLPGLDGYRVAQTLRAQVGNGIRLVAMTGYGSPHGR ECCCCCCHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCC DQALRAGFDRHLVKPVKPDELDRILSEL HHHHHHCHHHHHCCCCCHHHHHHHHHCC >Mature Secondary Structure GEPHPATVLNVNDDDANRYLVNRLLSLAGYNVVEAATGMGALLMAQQHRPDVIILDVKL CCCCCCEEEECCCCCHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHCCCCCEEEEEEEC PDISGYEVCERLRANPQTAAMAVLHTSATFVTSDKKVRGLDGGADAYLTQPFEGAELIAT CCCCHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCEECCCCCCCCEEECCCCCHHHHHH VKSLLRLRHAEQVARQRANALAEMDRRKDEFLAMLGHELRNPLAAIMTAIGILERRPTSD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DKEARMRGIIQRQTNHLARLVDDLLDVSRITRDKVELRPGSVDLVPVLRQVLQIVQPMAD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCC SRGLGLDVSLPSGPLWLQADATRLEQVFTNLLDNAIKYTDAGGVHLRAEQEGVGGAAQAV CCCCEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCHHHHEE VRVKDSGIGIPPEVLPHIFELFAQADTSLERSRGGLGIGLTLVRKLIQLHGGEVTARSNG EEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCEEHHHHHHHHHHHCCCEEEECCCC PGHGSEFVVKLPLDHTMGKSAPARDAVDLRRGRRVLVVEDNSDARQAMRDLLELWGHQVA CCCCCCEEEEECCCCCCCCCCCCCHHHHHHHCCEEEEEECCCHHHHHHHHHHHHCCCEEE VAPDGLQGVALAMAQPPELALVDIGLPGLDGYRVAQTLRAQVGNGIRLVAMTGYGSPHGR ECCCCCCHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCC DQALRAGFDRHLVKPVKPDELDRILSEL HHHHHHCHHHHHCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301; 12176318 [H]