| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108759566
Identifier: 108759566
GI number: 108759566
Start: 2459374
End: 2460798
Strand: Reverse
Name: 108759566
Synonym: MXAN_2127
Alternate gene names: NA
Gene position: 2460798-2459374 (Counterclockwise)
Preceding gene: 108757333
Following gene: 108757876
Centisome position: 26.92
GC content: 63.79
Gene sequence:
>1425_bases ATGGCAGAGGTGTGCCCCGAATCCTCGCAACAAAACCAGACTCCTTCTGATATACGCCGCCCCGAAATCCTCACAAGAAG TGGAGAAATCATGTCACGAGACCTTTCGAGGTTGGCGTTGTCCGCACTATTCATCCCGAGTTTGCTGCTCATCGCCTGTG GAGAGGAGAACCTGGCGCCGGGGCTCAACCTGGACCCGGAAATGGCCCGAGTACCAGCGGGGGCCCCGATTCGCGAGGGC TACATCTGGAGCAACATGCGGGAGAAGTTCGTCCCGGTCACGTATGCCGAGGTGGACGGTCTGGCCATCCAAGAGGGCGA CATGGTCCTGGGGACGGTGCAGCAGATGGAGGCGCGCGTGCGCGAGGTGAAGGCCCTGGGGCTGGATGCCTCGGGCCCCC GAGCCCAGGGCCTCGCCAAGACCGACCTGAACTCGCGCTGGCCCAACGCCGTGGTTCCGTACACCATCGACTCGGGCGTT GCGAACCAGAATCGAATCCAGGACGCCATCAATCACTGGCATGACCGGACCCACATCTCGTTCGTGCTCCGCACGGCGAA CAACGCGGCGCAATATCCTGACTACGTTCGCATCCAGTCGGGCACCGGATGCTCCGCCCACTATGGCCGTCTGGGTGGGC AACAAGGGGTGTGGCTGGATGGCAGTTGCAGCACGGGCACCATCATCCACGAGCTGGGACACAGCCTGGGACTCAACCAC GAGCACAACCGCCAGGACCGCGACACCTACGTCATCATCCGGTGGGAGAACATGGTGGCGGGCGCGGCGTCCCAGTTCCA GCAGAACAACAACGAGGACGACGACTTCTTTGGCTATGACTTCGGCTCCATCATGCACTACGGCCCGATGCAGGGCTCGA AGAACGGGCGGCCGACCATCGAGGGCCGGGGTGGACAGACCATCGGGCAGCGCAACGCGCTGAGCACGCTCGACGTCGTG ACGGTGACGCGGCTCTATTCGAGGACCATCACGCTTCGTGCTTCAAACGGCGACTACCTGGTGGCCGAGGGCGGCGGTGG CGCCATGGTGGACGCCAATCGCGTCGCAGTGGGGCCTTGGGAGCGGTTCCAGTTGGTGGACCTGGACGGCAATGACCTGG TGACGGGCGACCTTGTCCAACTCCAGACCATCAACGGCAACTTCGTCCAGGCGACGAACGGTGGTGGCTCGACGCTGAAC GCCTGGGAGATGGCTCCCGGCAACTGGGAGACCTTCCGCATTTGGAAGATGGCCGGCACGGGTCTCTCCACCATCGCCAC CGGCGACGGCGTGGTCCTGGGCACACTCACTCCGGGCTATCCCAAGTACTGGCAGGCGGTGAACGGCGGCGGCGCTGGAG TGACCGTCAACACCGACACCATCAACCTGGGCCCCGCGAACATCTTCACCGTCGCGTTCCCGTGA
Upstream 100 bases:
>100_bases CCGCACCCAATCCAAGCCGAACCCCTGGAGATGCACATCACCTCCACAAACCCACACGAGTCAACCTCGACCCAGTCAGC CCTGACGCGTCACCAAGGCA
Downstream 100 bases:
>100_bases GTGAAGCGTCCGTGCGATTCACGCACGGACCTTCGCCTTGAAACGACGCTGGGGATTCAGCCCCGCGACGCGGTGACTGA ATCCCCAGGGGACTTCCTGC
Product: M12A family peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MAEVCPESSQQNQTPSDIRRPEILTRSGEIMSRDLSRLALSALFIPSLLLIACGEENLAPGLNLDPEMARVPAGAPIREG YIWSNMREKFVPVTYAEVDGLAIQEGDMVLGTVQQMEARVREVKALGLDASGPRAQGLAKTDLNSRWPNAVVPYTIDSGV ANQNRIQDAINHWHDRTHISFVLRTANNAAQYPDYVRIQSGTGCSAHYGRLGGQQGVWLDGSCSTGTIIHELGHSLGLNH EHNRQDRDTYVIIRWENMVAGAASQFQQNNNEDDDFFGYDFGSIMHYGPMQGSKNGRPTIEGRGGQTIGQRNALSTLDVV TVTRLYSRTITLRASNGDYLVAEGGGGAMVDANRVAVGPWERFQLVDLDGNDLVTGDLVQLQTINGNFVQATNGGGSTLN AWEMAPGNWETFRIWKMAGTGLSTIATGDGVVLGTLTPGYPKYWQAVNGGGAGVTVNTDTINLGPANIFTVAFP
Sequences:
>Translated_474_residues MAEVCPESSQQNQTPSDIRRPEILTRSGEIMSRDLSRLALSALFIPSLLLIACGEENLAPGLNLDPEMARVPAGAPIREG YIWSNMREKFVPVTYAEVDGLAIQEGDMVLGTVQQMEARVREVKALGLDASGPRAQGLAKTDLNSRWPNAVVPYTIDSGV ANQNRIQDAINHWHDRTHISFVLRTANNAAQYPDYVRIQSGTGCSAHYGRLGGQQGVWLDGSCSTGTIIHELGHSLGLNH EHNRQDRDTYVIIRWENMVAGAASQFQQNNNEDDDFFGYDFGSIMHYGPMQGSKNGRPTIEGRGGQTIGQRNALSTLDVV TVTRLYSRTITLRASNGDYLVAEGGGGAMVDANRVAVGPWERFQLVDLDGNDLVTGDLVQLQTINGNFVQATNGGGSTLN AWEMAPGNWETFRIWKMAGTGLSTIATGDGVVLGTLTPGYPKYWQAVNGGGAGVTVNTDTINLGPANIFTVAFP >Mature_473_residues AEVCPESSQQNQTPSDIRRPEILTRSGEIMSRDLSRLALSALFIPSLLLIACGEENLAPGLNLDPEMARVPAGAPIREGY IWSNMREKFVPVTYAEVDGLAIQEGDMVLGTVQQMEARVREVKALGLDASGPRAQGLAKTDLNSRWPNAVVPYTIDSGVA NQNRIQDAINHWHDRTHISFVLRTANNAAQYPDYVRIQSGTGCSAHYGRLGGQQGVWLDGSCSTGTIIHELGHSLGLNHE HNRQDRDTYVIIRWENMVAGAASQFQQNNNEDDDFFGYDFGSIMHYGPMQGSKNGRPTIEGRGGQTIGQRNALSTLDVVT VTRLYSRTITLRASNGDYLVAEGGGGAMVDANRVAVGPWERFQLVDLDGNDLVTGDLVQLQTINGNFVQATNGGGSTLNA WEMAPGNWETFRIWKMAGTGLSTIATGDGVVLGTLTPGYPKYWQAVNGGGAGVTVNTDTINLGPANIFTVAFP
Specific function: Zinc metallendopeptidase that cleaves preferentially on amino-terminal side of aspartate-containing substrates [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ricin B-type lectin domain [H]
Homologues:
Organism=Homo sapiens, GI4502421, Length=258, Percent_Identity=31.3953488372093, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI5453579, Length=258, Percent_Identity=31.3953488372093, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI157502169, Length=182, Percent_Identity=34.0659340659341, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI22547221, Length=273, Percent_Identity=30.7692307692308, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI6912724, Length=280, Percent_Identity=29.2857142857143, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI153070264, Length=196, Percent_Identity=29.5918367346939, Blast_Score=85, Evalue=1e-16, Organism=Homo sapiens, GI153070262, Length=203, Percent_Identity=30.0492610837438, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71981168, Length=232, Percent_Identity=36.2068965517241, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI71986142, Length=223, Percent_Identity=36.322869955157, Blast_Score=136, Evalue=2e-32, Organism=Caenorhabditis elegans, GI71989620, Length=187, Percent_Identity=41.1764705882353, Blast_Score=131, Evalue=7e-31, Organism=Caenorhabditis elegans, GI71981193, Length=187, Percent_Identity=36.8983957219251, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI71986189, Length=189, Percent_Identity=37.5661375661376, Blast_Score=125, Evalue=4e-29, Organism=Caenorhabditis elegans, GI71995692, Length=186, Percent_Identity=38.1720430107527, Blast_Score=122, Evalue=5e-28, Organism=Caenorhabditis elegans, GI25149641, Length=189, Percent_Identity=35.4497354497354, Blast_Score=118, Evalue=7e-27, Organism=Caenorhabditis elegans, GI115532764, Length=189, Percent_Identity=39.1534391534392, Blast_Score=118, Evalue=8e-27, Organism=Caenorhabditis elegans, GI71980967, Length=272, Percent_Identity=32.7205882352941, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI71996833, Length=237, Percent_Identity=35.0210970464135, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17568533, Length=307, Percent_Identity=32.5732899022801, Blast_Score=106, Evalue=3e-23, Organism=Caenorhabditis elegans, GI25152806, Length=223, Percent_Identity=31.390134529148, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI71989942, Length=179, Percent_Identity=35.7541899441341, Blast_Score=98, Evalue=7e-21, Organism=Caenorhabditis elegans, GI71989946, Length=179, Percent_Identity=35.7541899441341, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI193210526, Length=243, Percent_Identity=32.0987654320988, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71983649, Length=240, Percent_Identity=30.4166666666667, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71983640, Length=240, Percent_Identity=30.4166666666667, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17568805, Length=214, Percent_Identity=29.4392523364486, Blast_Score=95, Evalue=7e-20, Organism=Caenorhabditis elegans, GI71983097, Length=186, Percent_Identity=31.7204301075269, Blast_Score=92, Evalue=6e-19, Organism=Caenorhabditis elegans, GI72000269, Length=246, Percent_Identity=30.8943089430894, Blast_Score=88, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17509235, Length=192, Percent_Identity=30.7291666666667, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI86562912, Length=248, Percent_Identity=28.2258064516129, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI71996558, Length=208, Percent_Identity=29.8076923076923, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI71996566, Length=208, Percent_Identity=29.8076923076923, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI71996019, Length=236, Percent_Identity=27.9661016949153, Blast_Score=86, Evalue=6e-17, Organism=Caenorhabditis elegans, GI25150905, Length=251, Percent_Identity=29.0836653386454, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI115532766, Length=99, Percent_Identity=44.4444444444444, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71993835, Length=201, Percent_Identity=27.363184079602, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI32566667, Length=190, Percent_Identity=28.4210526315789, Blast_Score=76, Evalue=4e-14, Organism=Caenorhabditis elegans, GI25149215, Length=190, Percent_Identity=28.4210526315789, Blast_Score=76, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17562122, Length=257, Percent_Identity=28.0155642023346, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71991562, Length=155, Percent_Identity=31.6129032258064, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71993705, Length=200, Percent_Identity=29, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17534131, Length=161, Percent_Identity=32.9192546583851, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI72000541, Length=205, Percent_Identity=28.780487804878, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI21355491, Length=192, Percent_Identity=39.0625, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI24649626, Length=197, Percent_Identity=37.5634517766497, Blast_Score=123, Evalue=2e-28, Organism=Drosophila melanogaster, GI24644493, Length=198, Percent_Identity=34.3434343434343, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24643089, Length=220, Percent_Identity=35.4545454545455, Blast_Score=105, Evalue=8e-23, Organism=Drosophila melanogaster, GI19921384, Length=194, Percent_Identity=34.020618556701, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI45549230, Length=193, Percent_Identity=35.7512953367876, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI20129545, Length=197, Percent_Identity=35.5329949238579, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI17136740, Length=193, Percent_Identity=33.160621761658, Blast_Score=95, Evalue=9e-20, Organism=Drosophila melanogaster, GI24649765, Length=193, Percent_Identity=33.160621761658, Blast_Score=95, Evalue=9e-20, Organism=Drosophila melanogaster, GI19921382, Length=240, Percent_Identity=32.9166666666667, Blast_Score=93, Evalue=4e-19, Organism=Drosophila melanogaster, GI19921388, Length=187, Percent_Identity=34.7593582887701, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI19921390, Length=218, Percent_Identity=32.5688073394495, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI19921386, Length=200, Percent_Identity=31.5, Blast_Score=82, Evalue=9e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001506 - InterPro: IPR006026 - InterPro: IPR008997 - InterPro: IPR000772 [H]
Pfam domain/function: PF01400 Astacin; PF00652 Ricin_B_lectin [H]
EC number: =3.4.24.76 [H]
Molecular weight: Translated: 51267; Mature: 51136
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEVCPESSQQNQTPSDIRRPEILTRSGEIMSRDLSRLALSALFIPSLLLIACGEENLAP CCCCCCCCCCCCCCHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC GLNLDPEMARVPAGAPIREGYIWSNMREKFVPVTYAEVDGLAIQEGDMVLGTVQQMEARV CCCCCHHHHHCCCCCCCCCCEEHHCHHHHCCEEEEEECCCEEEECCCEEEHHHHHHHHHH REVKALGLDASGPRAQGLAKTDLNSRWPNAVVPYTIDSGVANQNRIQDAINHWHDRTHIS HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEE FVLRTANNAAQYPDYVRIQSGTGCSAHYGRLGGQQGVWLDGSCSTGTIIHELGHSLGLNH EEEEECCCCCCCCCEEEEECCCCCCHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHCCCC EHNRQDRDTYVIIRWENMVAGAASQFQQNNNEDDDFFGYDFGSIMHYGPMQGSKNGRPTI CCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCEECCCHHHHHEECCCCCCCCCCCEE EGRGGQTIGQRNALSTLDVVTVTRLYSRTITLRASNGDYLVAEGGGGAMVDANRVAVGPW ECCCCCCCCCCCCCHHHHHHHHHHHHEEEEEEEECCCCEEEEECCCCEEEECCEEEECCC ERFQLVDLDGNDLVTGDLVQLQTINGNFVQATNGGGSTLNAWEMAPGNWETFRIWKMAGT CCEEEEECCCCCEEECCEEEEEEECCCEEEEECCCCCCEEEEECCCCCCCEEEEEEECCC GLSTIATGDGVVLGTLTPGYPKYWQAVNGGGAGVTVNTDTINLGPANIFTVAFP CCEEEECCCCEEEECCCCCCHHHHHEECCCCCEEEEECCEEECCCCEEEEEECC >Mature Secondary Structure AEVCPESSQQNQTPSDIRRPEILTRSGEIMSRDLSRLALSALFIPSLLLIACGEENLAP CCCCCCCCCCCCCHHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC GLNLDPEMARVPAGAPIREGYIWSNMREKFVPVTYAEVDGLAIQEGDMVLGTVQQMEARV CCCCCHHHHHCCCCCCCCCCEEHHCHHHHCCEEEEEECCCEEEECCCEEEHHHHHHHHHH REVKALGLDASGPRAQGLAKTDLNSRWPNAVVPYTIDSGVANQNRIQDAINHWHDRTHIS HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEE FVLRTANNAAQYPDYVRIQSGTGCSAHYGRLGGQQGVWLDGSCSTGTIIHELGHSLGLNH EEEEECCCCCCCCCEEEEECCCCCCHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHCCCC EHNRQDRDTYVIIRWENMVAGAASQFQQNNNEDDDFFGYDFGSIMHYGPMQGSKNGRPTI CCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCEECCCHHHHHEECCCCCCCCCCCEE EGRGGQTIGQRNALSTLDVVTVTRLYSRTITLRASNGDYLVAEGGGGAMVDANRVAVGPW ECCCCCCCCCCCCCHHHHHHHHHHHHEEEEEEEECCCCEEEEECCCCEEEECCEEEECCC ERFQLVDLDGNDLVTGDLVQLQTINGNFVQATNGGGSTLNAWEMAPGNWETFRIWKMAGT CCEEEEECCCCCEEECCEEEEEEECCCEEEEECCCCCCEEEEECCCCCCCEEEEEEECCC GLSTIATGDGVVLGTLTPGYPKYWQAVNGGGAGVTVNTDTINLGPANIFTVAFP CCEEEECCCCEEEECCCCCCHHHHHEECCCCCEEEEECCEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7771796; 7768917 [H]