| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108759315
Identifier: 108759315
GI number: 108759315
Start: 4806103
End: 4807080
Strand: Reverse
Name: 108759315
Synonym: MXAN_3947
Alternate gene names: NA
Gene position: 4807080-4806103 (Counterclockwise)
Preceding gene: 108761111
Following gene: 108759877
Centisome position: 52.6
GC content: 68.1
Gene sequence:
>978_bases ATGTCCAGCGTAGCGACGGCCGTCCCCCTGACGGCCCGTGACAGCGCGGTGAGCCGCCGGCTGCGAATCACCCCCAGCAT GTGCGGCCAGACGTCCTTGTTCGCCGGGCAGATTGGCGACTGGGCATGGGACACCGTCAGCCGCCTGTGTGGCACGGACG TGCTGACCGCGACCAACGCCTCAGGCGCGCCCACCTACCTGGCCTTCTATTACTTCCGCATCCGGGGCACGCCCGCGCTG CATCCCGGCGCGCTGCGCTTCGGCGACACGCTGGACGTCACGTCGAAGGCGTACAACTTCGGCAGCGAATCCGTCCTGAC GGTGCACCGCATCTGCAAGACGGCGGAGGGCGGCGCTCCGGAGGCGGATGCCTTCGGCCATGAAGAGCTGTACGAGCAGC CCCAGCCAGGCCGCATCTACGCGGAGACCTTCAACCGGTGGATCACGCGCTCGGACGGCAAGTCGAACGAGAGCCTGATC AAGTCCTCGCCCGTGGGGTTCCAGTACGCACACCTGCCGCTCTTGCCGGACGAATACTCGCCGCGGCGGGCCTATGGGGA CGCGCGGGCGCGGGGCACCTTTCACGATGTGGACTCCGCGGAGTACCGGCTGACCGTGGACCGCTTCCCGCTGCGCTACG CGGTGGACGTCATCCGGGACGTCAATGGGGTGGGGCTCATCTACTTCGCGTCGTATTTCTCGATGGTGGACTGGGCCATC TGGCAGCTGGCGAGGCACCAGGGACGCAGCGAGCAGGCCTTCCTGTCGCGCGTGGTGCTGGACCAGCAACTGTGCTTCCT CGGCAACGCGGCGCTGGACACCACCTTCGACATCGACGTGCAGCACTGGGAGCGGGTGGGCGGCGGGGAAGAGCTGTTCA ACGTGAAGATGCGCGAGGGCGCGCAGGGCCGGGACATCGCCGTGGCGACGGTCAAGGTGCGCTTCGACGCCGCTTCGGAA GGAGGCCGCCGTGGGTGA
Upstream 100 bases:
>100_bases CCGGGCGGGTGGGGCAGGCCCTTGCTCTTCTTGTCGGCGATTCGTGACTTCCATCGCGACTACCAATGGATTTCCTAGCC TCGGGGCTTCGAGCAAAGCC
Downstream 100 bases:
>100_bases GCCGATGACAGACGAACAAATCCGCGGAGTCGTGCACCAGTCCATCGTGCGCGTCCTGCCCCGCGTGCGCTCCAACGAGA TTGCGGGCCACTTGAACCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MSSVATAVPLTARDSAVSRRLRITPSMCGQTSLFAGQIGDWAWDTVSRLCGTDVLTATNASGAPTYLAFYYFRIRGTPAL HPGALRFGDTLDVTSKAYNFGSESVLTVHRICKTAEGGAPEADAFGHEELYEQPQPGRIYAETFNRWITRSDGKSNESLI KSSPVGFQYAHLPLLPDEYSPRRAYGDARARGTFHDVDSAEYRLTVDRFPLRYAVDVIRDVNGVGLIYFASYFSMVDWAI WQLARHQGRSEQAFLSRVVLDQQLCFLGNAALDTTFDIDVQHWERVGGGEELFNVKMREGAQGRDIAVATVKVRFDAASE GGRRG
Sequences:
>Translated_325_residues MSSVATAVPLTARDSAVSRRLRITPSMCGQTSLFAGQIGDWAWDTVSRLCGTDVLTATNASGAPTYLAFYYFRIRGTPAL HPGALRFGDTLDVTSKAYNFGSESVLTVHRICKTAEGGAPEADAFGHEELYEQPQPGRIYAETFNRWITRSDGKSNESLI KSSPVGFQYAHLPLLPDEYSPRRAYGDARARGTFHDVDSAEYRLTVDRFPLRYAVDVIRDVNGVGLIYFASYFSMVDWAI WQLARHQGRSEQAFLSRVVLDQQLCFLGNAALDTTFDIDVQHWERVGGGEELFNVKMREGAQGRDIAVATVKVRFDAASE GGRRG >Mature_324_residues SSVATAVPLTARDSAVSRRLRITPSMCGQTSLFAGQIGDWAWDTVSRLCGTDVLTATNASGAPTYLAFYYFRIRGTPALH PGALRFGDTLDVTSKAYNFGSESVLTVHRICKTAEGGAPEADAFGHEELYEQPQPGRIYAETFNRWITRSDGKSNESLIK SSPVGFQYAHLPLLPDEYSPRRAYGDARARGTFHDVDSAEYRLTVDRFPLRYAVDVIRDVNGVGLIYFASYFSMVDWAIW QLARHQGRSEQAFLSRVVLDQQLCFLGNAALDTTFDIDVQHWERVGGGEELFNVKMREGAQGRDIAVATVKVRFDAASEG GRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35986; Mature: 35854
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVATAVPLTARDSAVSRRLRITPSMCGQTSLFAGQIGDWAWDTVSRLCGTDVLTATNA CCCCCCCCCCCCCHHHHHHEEECCHHHCCCCCHHHCCCCCHHHHHHHHHHCCCEEEECCC SGAPTYLAFYYFRIRGTPALHPGALRFGDTLDVTSKAYNFGSESVLTVHRICKTAEGGAP CCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCC EADAFGHEELYEQPQPGRIYAETFNRWITRSDGKSNESLIKSSPVGFQYAHLPLLPDEYS CCCCCCCHHHHCCCCCCEEHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCC PRRAYGDARARGTFHDVDSAEYRLTVDRFPLRYAVDVIRDVNGVGLIYFASYFSMVDWAI CHHHCCCHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH WQLARHQGRSEQAFLSRVVLDQQLCFLGNAALDTTFDIDVQHWERVGGGEELFNVKMREG HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHCCCCHHHEEEHHHCC AQGRDIAVATVKVRFDAASEGGRRG CCCCEEEEEEEEEEEECCCCCCCCC >Mature Secondary Structure SSVATAVPLTARDSAVSRRLRITPSMCGQTSLFAGQIGDWAWDTVSRLCGTDVLTATNA CCCCCCCCCCCCHHHHHHEEECCHHHCCCCCHHHCCCCCHHHHHHHHHHCCCEEEECCC SGAPTYLAFYYFRIRGTPALHPGALRFGDTLDVTSKAYNFGSESVLTVHRICKTAEGGAP CCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCC EADAFGHEELYEQPQPGRIYAETFNRWITRSDGKSNESLIKSSPVGFQYAHLPLLPDEYS CCCCCCCHHHHCCCCCCEEHHHHHHHHHCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCC PRRAYGDARARGTFHDVDSAEYRLTVDRFPLRYAVDVIRDVNGVGLIYFASYFSMVDWAI CHHHCCCHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH WQLARHQGRSEQAFLSRVVLDQQLCFLGNAALDTTFDIDVQHWERVGGGEELFNVKMREG HHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHCCCCHHHEEEHHHCC AQGRDIAVATVKVRFDAASEGGRRG CCCCEEEEEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA