| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yfhR [H]
Identifier: 108759013
GI number: 108759013
Start: 2744527
End: 2745423
Strand: Reverse
Name: yfhR [H]
Synonym: MXAN_2361
Alternate gene names: 108759013
Gene position: 2745423-2744527 (Counterclockwise)
Preceding gene: 108758564
Following gene: 108756965
Centisome position: 30.04
GC content: 72.13
Gene sequence:
>897_bases ATGGCGCTGGCGCCCCTCTGCGTGTTGCTCGCCGCGGCGGGATATCTCGTGGTGAACGGTCATCGCATTGGCCAGGGCCT GCTGCATCCGTCGCCCATTCCGGTGACACGTCCCCCGGCGGAGCCGGCGTTGTCGCCGCTGGAGGACGTGGCCTTCACCA CGTCCGACGGGGTGCCGCTCAAGGGCTGGTACGTGCCTTCCCGCAACCGCGCCGCGGTGGTGCTGGTACACGGCTTCGCG GACAACCGCGCGCAGTTGCTCTTCGAGGCCCGGACGCTCGCGGGCGCGGGCTACGGTGTGTTGCTCTTTGATTTACGCGC GCATGGCGAGAGCGGCGGCGACACGGTGACGTGGGGAGACCGGGAGCGGCGCGACGTGACGGCGGCGCTGGATTTCATCT CACGGCGCCCGGACGTGGACCCGGGACGGTTGGGCCTCTTCGGCTTCTCCATGGGCGGCACCACGTCGCTCCTGGTCGCC AGCGAGGACGCGCGGGTGAAGGCGGTGGCCGCCGCGGGGGCCTATCCCGCGCTGGAGGCGGACATCTACGCGGGCTATGG CCGCTGGGGTGCGATGAGCGCGGAGCCGGTGCTGTGGACCCTGCGCCGCGCGGGTGTGACGGTGGACGCGGTGCGCCCCA TTGACGGGATGTGCCGACTGGGCGGCAGGCCGCTGCTGCTGGTCAACGGCGACGTGGACCCGGACGCGCCCGCGAAGCTC CAGGCCAGCCTCTTCCAGGCCGCGTGCGAACCCAAGTCACTCTGGGTCGTCGAGGGCGCGGGCCATGGCCAGTACGCGCG TGTGGCGCCGGAGGAATACGCGCGCCGGCTGCTCCAGCACTTCGGCGCGGCGCTCCAGGCCCTGCCTCAAGCCTCCTCGG GCGGCGCCACCCACTGA
Upstream 100 bases:
>100_bases CTTGCATTCGCTCCGCCACCCCCTCGGCTCAGCTAGGGTTCGCTTTATTCCAAGCCAATCCCAGATATCCGTGAAAACAC GCACTCAATTCCGCTGTCTC
Downstream 100 bases:
>100_bases GGCGCCGCGTCCAGCGCGGGCCGCTCCTCCAGCAACTCGTGCGGGCGGAAGGCGCCCTTGTAGCGCAGGGACGCGCACGC CAGGACGCGGTAGCCCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MALAPLCVLLAAAGYLVVNGHRIGQGLLHPSPIPVTRPPAEPALSPLEDVAFTTSDGVPLKGWYVPSRNRAAVVLVHGFA DNRAQLLFEARTLAGAGYGVLLFDLRAHGESGGDTVTWGDRERRDVTAALDFISRRPDVDPGRLGLFGFSMGGTTSLLVA SEDARVKAVAAAGAYPALEADIYAGYGRWGAMSAEPVLWTLRRAGVTVDAVRPIDGMCRLGGRPLLLVNGDVDPDAPAKL QASLFQAACEPKSLWVVEGAGHGQYARVAPEEYARRLLQHFGAALQALPQASSGGATH
Sequences:
>Translated_298_residues MALAPLCVLLAAAGYLVVNGHRIGQGLLHPSPIPVTRPPAEPALSPLEDVAFTTSDGVPLKGWYVPSRNRAAVVLVHGFA DNRAQLLFEARTLAGAGYGVLLFDLRAHGESGGDTVTWGDRERRDVTAALDFISRRPDVDPGRLGLFGFSMGGTTSLLVA SEDARVKAVAAAGAYPALEADIYAGYGRWGAMSAEPVLWTLRRAGVTVDAVRPIDGMCRLGGRPLLLVNGDVDPDAPAKL QASLFQAACEPKSLWVVEGAGHGQYARVAPEEYARRLLQHFGAALQALPQASSGGATH >Mature_297_residues ALAPLCVLLAAAGYLVVNGHRIGQGLLHPSPIPVTRPPAEPALSPLEDVAFTTSDGVPLKGWYVPSRNRAAVVLVHGFAD NRAQLLFEARTLAGAGYGVLLFDLRAHGESGGDTVTWGDRERRDVTAALDFISRRPDVDPGRLGLFGFSMGGTTSLLVAS EDARVKAVAAAGAYPALEADIYAGYGRWGAMSAEPVLWTLRRAGVTVDAVRPIDGMCRLGGRPLLLVNGDVDPDAPAKLQ ASLFQAACEPKSLWVVEGAGHGQYARVAPEEYARRLLQHFGAALQALPQASSGGATH
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine esterase family [H]
Homologues:
Organism=Escherichia coli, GI226510965, Length=226, Percent_Identity=28.7610619469027, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001375 [H]
Pfam domain/function: PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 31364; Mature: 31233
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALAPLCVLLAAAGYLVVNGHRIGQGLLHPSPIPVTRPPAEPALSPLEDVAFTTSDGVPL CCHHHHHHHHHHCCEEEEECEECCCCCCCCCCCCCCCCCCCCCCCCHHHHEEECCCCCCE KGWYVPSRNRAAVVLVHGFADNRAQLLFEARTLAGAGYGVLLFDLRAHGESGGDTVTWGD EEEECCCCCCEEEEEEECCCCCCHHEEEEHHHHCCCCCEEEEEEEEECCCCCCCEEEECC RERRDVTAALDFISRRPDVDPGRLGLFGFSMGGTTSLLVASEDARVKAVAAAGAYPALEA CHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCEEE DIYAGYGRWGAMSAEPVLWTLRRAGVTVDAVRPIDGMCRLGGRPLLLVNGDVDPDAPAKL EEEECCCCCCCCCCCHHHHHHHHCCEEEEECCCCCHHHHCCCCEEEEECCCCCCCCCHHH QASLFQAACEPKSLWVVEGAGHGQYARVAPEEYARRLLQHFGAALQALPQASSGGATH HHHHHHHHCCCCEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure ALAPLCVLLAAAGYLVVNGHRIGQGLLHPSPIPVTRPPAEPALSPLEDVAFTTSDGVPL CHHHHHHHHHHCCEEEEECEECCCCCCCCCCCCCCCCCCCCCCCCHHHHEEECCCCCCE KGWYVPSRNRAAVVLVHGFADNRAQLLFEARTLAGAGYGVLLFDLRAHGESGGDTVTWGD EEEECCCCCCEEEEEEECCCCCCHHEEEEHHHHCCCCCEEEEEEEEECCCCCCCEEEECC RERRDVTAALDFISRRPDVDPGRLGLFGFSMGGTTSLLVASEDARVKAVAAAGAYPALEA CHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCEEE DIYAGYGRWGAMSAEPVLWTLRRAGVTVDAVRPIDGMCRLGGRPLLLVNGDVDPDAPAKL EEEECCCCCCCCCCCHHHHHHHHCCEEEEECCCCCHHHHCCCCEEEEECCCCCCCCCHHH QASLFQAACEPKSLWVVEGAGHGQYARVAPEEYARRLLQHFGAALQALPQASSGGATH HHHHHHHHCCCCEEEEEECCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]