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The map label for this gene is ycbC [H]

Identifier: 108758987

GI number: 108758987

Start: 6675854

End: 6676630

Strand: Reverse

Name: ycbC [H]

Synonym: MXAN_5362

Alternate gene names: 108758987

Gene position: 6676630-6675854 (Counterclockwise)

Preceding gene: 108758383

Following gene: 108758165

Centisome position: 73.05

GC content: 72.97

Gene sequence:

>777_bases
GTGTTCCTCTTCCTGTCGAAGGTGCTCGACCTGTTGCTGGCGCCGCTCTCCTGGGCGCTGCTGCTGTGGCTGGTGGCCTG
GGGGCTGCGGCGGCGACGTGAGCGGCTGTCGCGGGTGCTGAGTGTGCTGGGCGGGGTGGTGCTGTACGCCTTCTCCATCG
AGCCGGTGGCCATGGGCCTGATGCGGGCGGCGGAGGCGGGGGCGGTGCGGTCCTTCCAGCCGGGGGCCACGTATGACGCC
GTCATCGTCCTGGGGGGCGCGTTGGATCCGGCCGCCACGGAGCGCACCGGCGTGCCGGAGTACAACGCGGCGGCGGAGCG
GGTGCTGCGGGGCTTCGAGCTGCTGCACGAGGGCCGGGCTCGGCGGGTGCTCCTCTCCGGCGGTTCGCTGGACCCGAGGC
CCGAGGCGGTGGTGGAGGCGGACGTGCTGCTCCGGCAGCTCCAGCAGTGGGGGATTCCGCGGGAGCGCATCGTCACGGAA
GGGCGCAGCCGGAATACACGGGAGAACGCGGTGGAGTCCGCGCGCATCATCCAGGAGCGAGGGTGGAAGTCCCTGCTGCT
GGTGACGAGCGCCGCGCACATGCCGCGCGCCGCGGGTTGCTTCGCGGCGGTGGGGCTGCGTCCGGACCTGTTGCCGGTGG
ACTCGCGGGCGTCGAACACGCCGCTGCGGCGCATGAGCTGGTTGCCGAGGTCTGGGGCCCTCAACCTGAGCACCGACGCC
CTGCGCGAGCTGGCGGGGCGTGCGGTGTATCGCGTGCGAGGCTGGACGGCGCCTTGA

Upstream 100 bases:

>100_bases
GCACAACCGGGTGAACCTGGTGCGCAACCCGAAGGTGGCCTACTTCTCCATCCTCCGGCAGAAGCTCCACTGGGGCGAGC
GCTGAAGGGCGCCGCGCGCC

Downstream 100 bases:

>100_bases
GCGCCGCGCCCCGTCCTACTTCAGCGGCGCGGGCGGCTGACGCGCGTCGGGAGCCAGGGCGCCAGTGCCGAGCCGGGAGA
TACGGCCATCCGCCTGGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MFLFLSKVLDLLLAPLSWALLLWLVAWGLRRRRERLSRVLSVLGGVVLYAFSIEPVAMGLMRAAEAGAVRSFQPGATYDA
VIVLGGALDPAATERTGVPEYNAAAERVLRGFELLHEGRARRVLLSGGSLDPRPEAVVEADVLLRQLQQWGIPRERIVTE
GRSRNTRENAVESARIIQERGWKSLLLVTSAAHMPRAAGCFAAVGLRPDLLPVDSRASNTPLRRMSWLPRSGALNLSTDA
LRELAGRAVYRVRGWTAP

Sequences:

>Translated_258_residues
MFLFLSKVLDLLLAPLSWALLLWLVAWGLRRRRERLSRVLSVLGGVVLYAFSIEPVAMGLMRAAEAGAVRSFQPGATYDA
VIVLGGALDPAATERTGVPEYNAAAERVLRGFELLHEGRARRVLLSGGSLDPRPEAVVEADVLLRQLQQWGIPRERIVTE
GRSRNTRENAVESARIIQERGWKSLLLVTSAAHMPRAAGCFAAVGLRPDLLPVDSRASNTPLRRMSWLPRSGALNLSTDA
LRELAGRAVYRVRGWTAP
>Mature_258_residues
MFLFLSKVLDLLLAPLSWALLLWLVAWGLRRRRERLSRVLSVLGGVVLYAFSIEPVAMGLMRAAEAGAVRSFQPGATYDA
VIVLGGALDPAATERTGVPEYNAAAERVLRGFELLHEGRARRVLLSGGSLDPRPEAVVEADVLLRQLQQWGIPRERIVTE
GRSRNTRENAVESARIIQERGWKSLLLVTSAAHMPRAAGCFAAVGLRPDLLPVDSRASNTPLRRMSWLPRSGALNLSTDA
LRELAGRAVYRVRGWTAP

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=205, Percent_Identity=29.7560975609756, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 28349; Mature: 28349

Theoretical pI: Translated: 11.56; Mature: 11.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLFLSKVLDLLLAPLSWALLLWLVAWGLRRRRERLSRVLSVLGGVVLYAFSIEPVAMGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
MRAAEAGAVRSFQPGATYDAVIVLGGALDPAATERTGVPEYNAAAERVLRGFELLHEGRA
HHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
RRVLLSGGSLDPRPEAVVEADVLLRQLQQWGIPRERIVTEGRSRNTRENAVESARIIQER
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHC
GWKSLLLVTSAAHMPRAAGCFAAVGLRPDLLPVDSRASNTPLRRMSWLPRSGALNLSTDA
CCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHH
LRELAGRAVYRVRGWTAP
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFLFLSKVLDLLLAPLSWALLLWLVAWGLRRRRERLSRVLSVLGGVVLYAFSIEPVAMGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
MRAAEAGAVRSFQPGATYDAVIVLGGALDPAATERTGVPEYNAAAERVLRGFELLHEGRA
HHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
RRVLLSGGSLDPRPEAVVEADVLLRQLQQWGIPRERIVTEGRSRNTRENAVESARIIQER
CEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHC
GWKSLLLVTSAAHMPRAAGCFAAVGLRPDLLPVDSRASNTPLRRMSWLPRSGALNLSTDA
CCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHH
LRELAGRAVYRVRGWTAP
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]