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The map label for this gene is glgB [H]

Identifier: 108758165

GI number: 108758165

Start: 6672072

End: 6673838

Strand: Reverse

Name: glgB [H]

Synonym: MXAN_5360

Alternate gene names: 108758165

Gene position: 6673838-6672072 (Counterclockwise)

Preceding gene: 108758987

Following gene: 108761476

Centisome position: 73.02

GC content: 65.87

Gene sequence:

>1767_bases
ATGGGCGCCACCGTCTATGCGGGTGGCACCACGTTCCGCGTCTGGGCGCCGATGGCGAGCCGGGTGTTCGTCTCGGGCGA
TTTCAACGGCTGGGGCACCTGGATTGAGCTGGGCAACGAGTTCAACGGCAACTTCTCTGGCGATGTGGCGGGCGCGGTGA
AGGGCCAGAAGTACAAGTTCATCACCCGCAACCAGTGGGGCAGCGACGCGTGGCGGGCGGACCCCCGCTCGGCGTGGCAG
GAGAACTCCACCGGCTCCAGCATCATCTACGACCACGGCGAGTACTGGTGGAACGCGCAGCAGTACAGCAGCCCTGGCTT
CAACGAGATGATCATCTACGAGATGCACGTCGGCACGTTCCACGACTCGCCCGGCTTCGGCCCCGGCAACTGGAACAGCG
CGATTGCCAGGCTCGACCACGTCCGGGACCTGGGCGCGAACATGATCAAGGTCATGCCCGCGTACGAGTTCGCCGGTGAC
TTCTCCTGGGGCTACAACGCTGCCTTCCCGTTCGCGCCGGAGAGCGCCTACGGGCACCCCAATGACATGAAGCGCTTCGT
GGACGAGGCGCACATGCGTGGCATCGGCGTCATCTTCGACGTGGTGCACAACCACTACGGCCCCAGCGACCTGCCCATGT
GGTGCTTCAGCGGCGACTGCCTGGGCTCGGGCGGCGAGTACTTCTACAACGACTGGCGCAAGAGCACGCCGTGGGGCGAC
ACCCGTCCGGACTACGGCCGCCCCGAGGTCCGCGCGTACATTCGCGACTCGATGATGAACCTCACCCATTCCTTCCGGGG
TGACGGTCTGCGCTGGGACGCCACCAAGTACATGCGCACGCAGAATGGCAGCGACACCACCGCCATCCCCGACGCGTGGC
GCGTGTTCCGCTCCATCAACCGCGAAATCAACGCCACGCAGCCGTGGAAGATCAGCATCGCCGAGGACTTCGGCGGTGGT
GACTTTATCACCAACGACGCCACGTCCGACACCTCGGGCGGCGCGGGCTTCGACTCGCAGTGGGGCGGCGACTTCGTGCA
CGCCATCCGCGCGGCGGTCATCGCGTCGAACGACAGCGGCCGTGACATGAACTCGGTGCGCAACGCCATCACCCAGCGCT
ACAGCGGGCGGCACACCGCGCGCGTCATCTACTCGGAGAGCCACGACGAGGTGGCCAACGGCAAGGCGCGCGTCCCGGAG
GAGATCTGGCCGGGCAACGCGGGGAGCTGGGCCGCCAAGAAGCGCTCCACGCTGGCGGCGGGCGTCGTCTTCACCTCGCC
TGGCATCCCGATGATCTTCCAGGGCCAGGAGTTCCTCGAGGACGGCTACTTCCAGGACACGGACCCCGTGGACTGGGGGA
AGAACAGCACTTACAGCGGCATCCGGACGCTGTACCGCGACCTCATCCGTCTGCGCCGCAACTGGTTCAACAACACGCGC
GGCCTGCGCGGCGGCAACGTCAACGTCCACCACGTCAACAACAGCGGCAAGGTGATTGCGTACCACCGTTGGGAGAGCGG
CGGGCCTGGGGATGACGTCGTCATCGTCGCCAACTTCAGCGGCACGTACTTCCCCAGCTACAACATCGGCTTCCCGCGCG
GGGGCATGTGGTACGCGCGCTTCAACAGCGACTGGAACGGGTACTCGGGCGACTTCGGCAACACGGCGTCGATTGACACC
GTGGCCTACAGTGGCGCGAAGGACGGCCTGTCGCACAACGCGTCGTTCGCCATCGGTCCCTACTCGCTGGTCATCTTCTC
GCAGTAG

Upstream 100 bases:

>100_bases
TGCCGCCGGCTGTGGGGAGTCCGCGCTCGAAGCGCCGCGAGATTCCGCGGAAGAGACGGCGGTCATCAGCCAGCAGCTCA
ACTCGTCCACGCGGCCCGGC

Downstream 100 bases:

>100_bases
CGCCTGACGGCACCGGGCGCCCGGGGTGGAATCTCCCGGGCGCTCGTTCGCGCCTCAGACGTTGTAGCGCCGGCCCTGCG
CGAGCGGTTCGATGACGCTC

Product: glycosy hydrolase family protein

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 588; Mature: 587

Protein sequence:

>588_residues
MGATVYAGGTTFRVWAPMASRVFVSGDFNGWGTWIELGNEFNGNFSGDVAGAVKGQKYKFITRNQWGSDAWRADPRSAWQ
ENSTGSSIIYDHGEYWWNAQQYSSPGFNEMIIYEMHVGTFHDSPGFGPGNWNSAIARLDHVRDLGANMIKVMPAYEFAGD
FSWGYNAAFPFAPESAYGHPNDMKRFVDEAHMRGIGVIFDVVHNHYGPSDLPMWCFSGDCLGSGGEYFYNDWRKSTPWGD
TRPDYGRPEVRAYIRDSMMNLTHSFRGDGLRWDATKYMRTQNGSDTTAIPDAWRVFRSINREINATQPWKISIAEDFGGG
DFITNDATSDTSGGAGFDSQWGGDFVHAIRAAVIASNDSGRDMNSVRNAITQRYSGRHTARVIYSESHDEVANGKARVPE
EIWPGNAGSWAAKKRSTLAAGVVFTSPGIPMIFQGQEFLEDGYFQDTDPVDWGKNSTYSGIRTLYRDLIRLRRNWFNNTR
GLRGGNVNVHHVNNSGKVIAYHRWESGGPGDDVVIVANFSGTYFPSYNIGFPRGGMWYARFNSDWNGYSGDFGNTASIDT
VAYSGAKDGLSHNASFAIGPYSLVIFSQ

Sequences:

>Translated_588_residues
MGATVYAGGTTFRVWAPMASRVFVSGDFNGWGTWIELGNEFNGNFSGDVAGAVKGQKYKFITRNQWGSDAWRADPRSAWQ
ENSTGSSIIYDHGEYWWNAQQYSSPGFNEMIIYEMHVGTFHDSPGFGPGNWNSAIARLDHVRDLGANMIKVMPAYEFAGD
FSWGYNAAFPFAPESAYGHPNDMKRFVDEAHMRGIGVIFDVVHNHYGPSDLPMWCFSGDCLGSGGEYFYNDWRKSTPWGD
TRPDYGRPEVRAYIRDSMMNLTHSFRGDGLRWDATKYMRTQNGSDTTAIPDAWRVFRSINREINATQPWKISIAEDFGGG
DFITNDATSDTSGGAGFDSQWGGDFVHAIRAAVIASNDSGRDMNSVRNAITQRYSGRHTARVIYSESHDEVANGKARVPE
EIWPGNAGSWAAKKRSTLAAGVVFTSPGIPMIFQGQEFLEDGYFQDTDPVDWGKNSTYSGIRTLYRDLIRLRRNWFNNTR
GLRGGNVNVHHVNNSGKVIAYHRWESGGPGDDVVIVANFSGTYFPSYNIGFPRGGMWYARFNSDWNGYSGDFGNTASIDT
VAYSGAKDGLSHNASFAIGPYSLVIFSQ
>Mature_587_residues
GATVYAGGTTFRVWAPMASRVFVSGDFNGWGTWIELGNEFNGNFSGDVAGAVKGQKYKFITRNQWGSDAWRADPRSAWQE
NSTGSSIIYDHGEYWWNAQQYSSPGFNEMIIYEMHVGTFHDSPGFGPGNWNSAIARLDHVRDLGANMIKVMPAYEFAGDF
SWGYNAAFPFAPESAYGHPNDMKRFVDEAHMRGIGVIFDVVHNHYGPSDLPMWCFSGDCLGSGGEYFYNDWRKSTPWGDT
RPDYGRPEVRAYIRDSMMNLTHSFRGDGLRWDATKYMRTQNGSDTTAIPDAWRVFRSINREINATQPWKISIAEDFGGGD
FITNDATSDTSGGAGFDSQWGGDFVHAIRAAVIASNDSGRDMNSVRNAITQRYSGRHTARVIYSESHDEVANGKARVPEE
IWPGNAGSWAAKKRSTLAAGVVFTSPGIPMIFQGQEFLEDGYFQDTDPVDWGKNSTYSGIRTLYRDLIRLRRNWFNNTRG
LRGGNVNVHHVNNSGKVIAYHRWESGGPGDDVVIVANFSGTYFPSYNIGFPRGGMWYARFNSDWNGYSGDFGNTASIDTV
AYSGAKDGLSHNASFAIGPYSLVIFSQ

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=423, Percent_Identity=26.4775413711584, Blast_Score=97, Evalue=5e-20,
Organism=Escherichia coli, GI1789839, Length=610, Percent_Identity=25.4098360655738, Blast_Score=125, Evalue=7e-30,
Organism=Caenorhabditis elegans, GI17554896, Length=416, Percent_Identity=25.2403846153846, Blast_Score=88, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI32564391, Length=363, Percent_Identity=25.068870523416, Blast_Score=78, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6320826, Length=621, Percent_Identity=24.4766505636071, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI28573410, Length=424, Percent_Identity=25.4716981132075, Blast_Score=93, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 65424; Mature: 65293

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGATVYAGGTTFRVWAPMASRVFVSGDFNGWGTWIELGNEFNGNFSGDVAGAVKGQKYKF
CCCEEEECCCEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCEEECCCCCEEEE
ITRNQWGSDAWRADPRSAWQENSTGSSIIYDHGEYWWNAQQYSSPGFNEMIIYEMHVGTF
EECCCCCCCCCCCCCHHHHCCCCCCCEEEEECCCEEECHHHCCCCCCCEEEEEEEEECEE
HDSPGFGPGNWNSAIARLDHVRDLGANMIKVMPAYEFAGDFSWGYNAAFPFAPESAYGHP
CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCH
NDMKRFVDEAHMRGIGVIFDVVHNHYGPSDLPMWCFSGDCLGSGGEYFYNDWRKSTPWGD
HHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCCCCCC
TRPDYGRPEVRAYIRDSMMNLTHSFRGDGLRWDATKYMRTQNGSDTTAIPDAWRVFRSIN
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHCCCCCCCCCCCHHHHHHHHHC
REINATQPWKISIAEDFGGGDFITNDATSDTSGGAGFDSQWGGDFVHAIRAAVIASNDSG
CCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCC
RDMNSVRNAITQRYSGRHTARVIYSESHDEVANGKARVPEEIWPGNAGSWAAKKRSTLAA
CHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCCCCCHHHCCCCCCCCHHHHCCCEEE
GVVFTSPGIPMIFQGQEFLEDGYFQDTDPVDWGKNSTYSGIRTLYRDLIRLRRNWFNNTR
EEEEECCCCCEEECCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
GLRGGNVNVHHVNNSGKVIAYHRWESGGPGDDVVIVANFSGTYFPSYNIGFPRGGMWYAR
CCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEE
FNSDWNGYSGDFGNTASIDTVAYSGAKDGLSHNASFAIGPYSLVIFSQ
ECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCEEEEEEEC
>Mature Secondary Structure 
GATVYAGGTTFRVWAPMASRVFVSGDFNGWGTWIELGNEFNGNFSGDVAGAVKGQKYKF
CCEEEECCCEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCEEECCCCCEEEE
ITRNQWGSDAWRADPRSAWQENSTGSSIIYDHGEYWWNAQQYSSPGFNEMIIYEMHVGTF
EECCCCCCCCCCCCCHHHHCCCCCCCEEEEECCCEEECHHHCCCCCCCEEEEEEEEECEE
HDSPGFGPGNWNSAIARLDHVRDLGANMIKVMPAYEFAGDFSWGYNAAFPFAPESAYGHP
CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCH
NDMKRFVDEAHMRGIGVIFDVVHNHYGPSDLPMWCFSGDCLGSGGEYFYNDWRKSTPWGD
HHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCCCCCC
TRPDYGRPEVRAYIRDSMMNLTHSFRGDGLRWDATKYMRTQNGSDTTAIPDAWRVFRSIN
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHCCCCCCCCCCCHHHHHHHHHC
REINATQPWKISIAEDFGGGDFITNDATSDTSGGAGFDSQWGGDFVHAIRAAVIASNDSG
CCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCC
RDMNSVRNAITQRYSGRHTARVIYSESHDEVANGKARVPEEIWPGNAGSWAAKKRSTLAA
CHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCCCCCHHHCCCCCCCCHHHHCCCEEE
GVVFTSPGIPMIFQGQEFLEDGYFQDTDPVDWGKNSTYSGIRTLYRDLIRLRRNWFNNTR
EEEEECCCCCEEECCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
GLRGGNVNVHHVNNSGKVIAYHRWESGGPGDDVVIVANFSGTYFPSYNIGFPRGGMWYAR
CCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEE
FNSDWNGYSGDFGNTASIDTVAYSGAKDGLSHNASFAIGPYSLVIFSQ
ECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEECCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12235376 [H]