| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758767
Identifier: 108758767
GI number: 108758767
Start: 1418714
End: 1421326
Strand: Reverse
Name: 108758767
Synonym: MXAN_1209
Alternate gene names: NA
Gene position: 1421326-1418714 (Counterclockwise)
Preceding gene: 108759781
Following gene: 108756876
Centisome position: 15.55
GC content: 67.66
Gene sequence:
>2613_bases TTGGGGGAACGCGCTCCAGTGCCGCATGACGCCGGACGCCTCGCCGCGACGGCCGAGCCATTCGCGGAATCCGCACGCAT GTACCAGTGGCGACGCGCACCACCTGCCGCATACGCCCGGCTGACGATTCCGTGGGCCACTCGGAAAATCCGCACCCATT TACCGGATGCCATGCACGTACCCCACACGCATCCCGCCCCTGTCGCACTCCTCGCTGAGCCATTCGCAGAATCCGCACCC ATTTACCCAGGCATGAGCCACGCGCCCGACACCACGCGCCTGCGCGCCCTTCGGCTGAAGGTCGCCTTCTACGCGTCCGC CCAGGACAACATCCCCCAAGCCGCTGAGCTGTCGTGGCCCGAACTGTCAGCGAAACTCATCACTCACCGTCGGAGTCAGT GCCCCACGTCGCCATGCGTCCGTGGCTGCCCCGCCAAGAATGGCCCCGCCTGGAGTCCCGTGAACATCGTCGAGCGGCGT CGCTCGGAGAACGTGCGCGCCGTCACGGTGGCCGTCTTCGACCTGGACCACCTGACGGCGGCGCAGCTCGCGTGCCTCGA CGCCGTCGAGCGCCATGGACTCGCCTTCGCCGTCCACTCGACGCACAGCAACCGCCCGCCCGAGGACTACTGCCTGCGGC TGGTGATGCCGTTGTCCCGGCCTGTGCCCCCGCGCGAGTGGCCGTCCGTGCGCGAGGCCGCAATCCGCATGCTCGGACTC CCCGCCGACCCGGCAACGAAGGACCTGGCGCGCATCTACTACCTGCCAGATGCGCCCGTGGGTGCGGAGCCCTACACGGC CAGTGGAGACGGAGCGCCCCTCGACGTCGACGCGCTGCTCGCCATGTCCCGGGCTGGACTCCCCACGGTGGCAGCCCCGG TGCCTTCCCCGAAGCCCGAGGAACCCGCCGACCTGTACGAGCTGCGGGCCCTCTTGCGTCGCATCCGCAAGCCCGAGCAC CTCGCCATCGTCCGCCGCGCCCTTGCCGGTGAGCCCCTGGCTGCCGTCGGCGAGCAGGACACGACGCTGAACACGCTCAT GTCATGCGCCGCCTTTGTCTTGCCGCTGTCCACGCCCGAGGCCGTCGTCATCGAGCTGTTCCGCGCGTCCTTCGCGGCCA CGGACTGGCGCGAGGGCACCGAACACCTGTGCGAGCAGGCCGTCCTCAAGCTGCGGCGCCACCGCGAGCGGAGGAAGGCG CGGGATGCCTCACGGCTCGCGGACAACACGGCCATTTGGGAAACCCTGGGCAGTCACGCACCTGAATCCGCGGCGAGCGA CGGCCCGGGAATCGAGGAGGACGCTCCCGACCCCGACGCGTGGATGAAGGAACTCTTCCTCGACATCACGAAGGACACCC GACGGCAGATTCGAAATTGCGAAGCGAACGTCGCCATCGTGCTCAGCAAGTCGCCCGAGTGGCGCGGCGTCTTCCGTTTC AACGAAGTCACGAAGAAGTTGGAGGTGGAGGGCGGCCCCCTCGGCCCCAGCGTGGACATTGAGACGCTCGACGTCCTGGT AGCTAACTGGATTCAGCTCAGCAAGTACGGGCGGCTTGGGCTGATGCCGAAGGCGCACGTCGTCGCGCAGCAGATCCTCG CCGTCGCGAAGCGCAACAGCTATGACCCGGTCGCCGACTACCTGGGAGGACTGGTCTGGGATGGAACGCCACGCCTCGAC GGGATGCTCGCGACATACTTCGGCGCGCAAGGGGATGCTCGATACCTCCAGGCCGTCGGCGCGAAGTTCGCCATCTCAGC GGTTGCGCGTGCCCTGCGTCCCGGATGCAAGGTCGACACGGTCATGATTTTGGAGGGGCCCCAGGGCCTGCGGAAGTCGA CGGCGTTCAGCATCTTGGGAGGTCGGCACTTCAGCGACGCGCCCATCGACGTCACCAGCAGGGACAGCGCCATGCTGGCC TCTCAGTTCTGGTTCATCGAACTGGCCGAGCTGAGCACCTTCCGGAAGTCGGAGGACCAGGCGCTCAAGGCGTTCATCAC CCGGACGGAGGACACCTACCGGCCGCCCTACGGACGCTCCAACGTGCAGGCCCCGCGCCGCTGCGTCTTCGTCGGCACAA CCAACGATGACGACTACCTGCGCGACCCCACGGGACAGAGGCGCTTCTGGCCGGTGAAGTGCTCCCGCATCGACACCGAC GCCCTCAAGCGCGACCGCGACCAAATCTGGGCCGAAGCCGTCGTGCGCTTCCACCAGGGCGAGGACTGGTGGCTGAGCAA CGAGGAGGCGGCAGGGGCCGAGCAGCAGGCCGCGCTGCGCATGGAGAACGTGGGGGACAGCCGGAAGGAAGTCATCCTGC GGTGGATTCTGGAGATGCCACCCGAAAAGCGACCCTCGGACGTGACACTTCTCCATGTGGGCATCGAAGCCTTTGCGCTC CACCCAGCCCAGGTTGACCACCGGATCTCACGGGAAATCGGCGCGGCCTTGAAGTCGCTGGGCTTCACCCGGGGCCAGCG TCGAATGGGAGACGGGAAGCGCCCGCTCGTCTACTACGTCCCGGATGAGCTTCGGAACGCCGCCACGGAGAAGCGGGGCG AGCGACGCGCGCCATTCCAGGTCATCGCGGGCAGCTCGGCGCCGCATGAGTGA
Upstream 100 bases:
>100_bases CCCGTCATCAATCAAGCTCTCTTCCTATCCTCTCTCCTTCTTCTCTTTAGAAAAGATGGAGTAGTAGAAAGGAGGATAGG TAATAGAGAAGGCTAAGGAT
Downstream 100 bases:
>100_bases GTCACTCGCAAAACCCGCACGCATTTACCGTGCATGAACAACAAGCTACTCACCAACCGTGCGGCGCTCTTCGTTGGAGA TGCCGCGCGGGTGGGCGAGG
Product: virulence-associated protein E domain-containing protein
Products: NA
Alternate protein names: Virulence-Associated Protein E; Virulence-Associated E; DNA Primase Domain Protein; Phage-Like Protein; P-Loop ATPase And Inactivated Derivatives-Like Protein; Prophage Ps2 Protein; Prophage Lp3 Helicase; Phage Protein; Virulence-Associated Protein E Family Protein; Phage-Related Virulence-Associated Protein E; Primase C Terminal 2 Family; Pyocin R2_PP TraC Domain Protein; P-Loop ATPase And Inactivated Derivatives-Like; Virulence-Associated Protein E Domain-Containing Protein; Helicase; DNA Primase Domain-Containing Protein; TraC Domain-Containing Protein; Phage Integrase Protein; APSE-2 Prophage; P-Loop ATPase And Inactivated Derivative; Imidazoleglycerol Phosphate Synthase; Virulence-Associated E Domain Protein
Number of amino acids: Translated: 870; Mature: 869
Protein sequence:
>870_residues MGERAPVPHDAGRLAATAEPFAESARMYQWRRAPPAAYARLTIPWATRKIRTHLPDAMHVPHTHPAPVALLAEPFAESAP IYPGMSHAPDTTRLRALRLKVAFYASAQDNIPQAAELSWPELSAKLITHRRSQCPTSPCVRGCPAKNGPAWSPVNIVERR RSENVRAVTVAVFDLDHLTAAQLACLDAVERHGLAFAVHSTHSNRPPEDYCLRLVMPLSRPVPPREWPSVREAAIRMLGL PADPATKDLARIYYLPDAPVGAEPYTASGDGAPLDVDALLAMSRAGLPTVAAPVPSPKPEEPADLYELRALLRRIRKPEH LAIVRRALAGEPLAAVGEQDTTLNTLMSCAAFVLPLSTPEAVVIELFRASFAATDWREGTEHLCEQAVLKLRRHRERRKA RDASRLADNTAIWETLGSHAPESAASDGPGIEEDAPDPDAWMKELFLDITKDTRRQIRNCEANVAIVLSKSPEWRGVFRF NEVTKKLEVEGGPLGPSVDIETLDVLVANWIQLSKYGRLGLMPKAHVVAQQILAVAKRNSYDPVADYLGGLVWDGTPRLD GMLATYFGAQGDARYLQAVGAKFAISAVARALRPGCKVDTVMILEGPQGLRKSTAFSILGGRHFSDAPIDVTSRDSAMLA SQFWFIELAELSTFRKSEDQALKAFITRTEDTYRPPYGRSNVQAPRRCVFVGTTNDDDYLRDPTGQRRFWPVKCSRIDTD ALKRDRDQIWAEAVVRFHQGEDWWLSNEEAAGAEQQAALRMENVGDSRKEVILRWILEMPPEKRPSDVTLLHVGIEAFAL HPAQVDHRISREIGAALKSLGFTRGQRRMGDGKRPLVYYVPDELRNAATEKRGERRAPFQVIAGSSAPHE
Sequences:
>Translated_870_residues MGERAPVPHDAGRLAATAEPFAESARMYQWRRAPPAAYARLTIPWATRKIRTHLPDAMHVPHTHPAPVALLAEPFAESAP IYPGMSHAPDTTRLRALRLKVAFYASAQDNIPQAAELSWPELSAKLITHRRSQCPTSPCVRGCPAKNGPAWSPVNIVERR RSENVRAVTVAVFDLDHLTAAQLACLDAVERHGLAFAVHSTHSNRPPEDYCLRLVMPLSRPVPPREWPSVREAAIRMLGL PADPATKDLARIYYLPDAPVGAEPYTASGDGAPLDVDALLAMSRAGLPTVAAPVPSPKPEEPADLYELRALLRRIRKPEH LAIVRRALAGEPLAAVGEQDTTLNTLMSCAAFVLPLSTPEAVVIELFRASFAATDWREGTEHLCEQAVLKLRRHRERRKA RDASRLADNTAIWETLGSHAPESAASDGPGIEEDAPDPDAWMKELFLDITKDTRRQIRNCEANVAIVLSKSPEWRGVFRF NEVTKKLEVEGGPLGPSVDIETLDVLVANWIQLSKYGRLGLMPKAHVVAQQILAVAKRNSYDPVADYLGGLVWDGTPRLD GMLATYFGAQGDARYLQAVGAKFAISAVARALRPGCKVDTVMILEGPQGLRKSTAFSILGGRHFSDAPIDVTSRDSAMLA SQFWFIELAELSTFRKSEDQALKAFITRTEDTYRPPYGRSNVQAPRRCVFVGTTNDDDYLRDPTGQRRFWPVKCSRIDTD ALKRDRDQIWAEAVVRFHQGEDWWLSNEEAAGAEQQAALRMENVGDSRKEVILRWILEMPPEKRPSDVTLLHVGIEAFAL HPAQVDHRISREIGAALKSLGFTRGQRRMGDGKRPLVYYVPDELRNAATEKRGERRAPFQVIAGSSAPHE >Mature_869_residues GERAPVPHDAGRLAATAEPFAESARMYQWRRAPPAAYARLTIPWATRKIRTHLPDAMHVPHTHPAPVALLAEPFAESAPI YPGMSHAPDTTRLRALRLKVAFYASAQDNIPQAAELSWPELSAKLITHRRSQCPTSPCVRGCPAKNGPAWSPVNIVERRR SENVRAVTVAVFDLDHLTAAQLACLDAVERHGLAFAVHSTHSNRPPEDYCLRLVMPLSRPVPPREWPSVREAAIRMLGLP ADPATKDLARIYYLPDAPVGAEPYTASGDGAPLDVDALLAMSRAGLPTVAAPVPSPKPEEPADLYELRALLRRIRKPEHL AIVRRALAGEPLAAVGEQDTTLNTLMSCAAFVLPLSTPEAVVIELFRASFAATDWREGTEHLCEQAVLKLRRHRERRKAR DASRLADNTAIWETLGSHAPESAASDGPGIEEDAPDPDAWMKELFLDITKDTRRQIRNCEANVAIVLSKSPEWRGVFRFN EVTKKLEVEGGPLGPSVDIETLDVLVANWIQLSKYGRLGLMPKAHVVAQQILAVAKRNSYDPVADYLGGLVWDGTPRLDG MLATYFGAQGDARYLQAVGAKFAISAVARALRPGCKVDTVMILEGPQGLRKSTAFSILGGRHFSDAPIDVTSRDSAMLAS QFWFIELAELSTFRKSEDQALKAFITRTEDTYRPPYGRSNVQAPRRCVFVGTTNDDDYLRDPTGQRRFWPVKCSRIDTDA LKRDRDQIWAEAVVRFHQGEDWWLSNEEAAGAEQQAALRMENVGDSRKEVILRWILEMPPEKRPSDVTLLHVGIEAFALH PAQVDHRISREIGAALKSLGFTRGQRRMGDGKRPLVYYVPDELRNAATEKRGERRAPFQVIAGSSAPHE
Specific function: Unknown
COG id: COG5545
COG function: function code R; Predicted P-loop ATPase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96312; Mature: 96180
Theoretical pI: Translated: 8.09; Mature: 8.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGERAPVPHDAGRLAATAEPFAESARMYQWRRAPPAAYARLTIPWATRKIRTHLPDAMHV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCCCCC PHTHPAPVALLAEPFAESAPIYPGMSHAPDTTRLRALRLKVAFYASAQDNIPQAAELSWP CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHEEEEEEEECCCCCCCCHHCCCCH ELSAKLITHRRSQCPTSPCVRGCPAKNGPAWSPVNIVERRRSENVRAVTVAVFDLDHLTA HHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEECHHHHH AQLACLDAVERHGLAFAVHSTHSNRPPEDYCLRLVMPLSRPVPPREWPSVREAAIRMLGL HHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC PADPATKDLARIYYLPDAPVGAEPYTASGDGAPLDVDALLAMSRAGLPTVAAPVPSPKPE CCCCCHHCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCC EPADLYELRALLRRIRKPEHLAIVRRALAGEPLAAVGEQDTTLNTLMSCAAFVLPLSTPE CCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCH AVVIELFRASFAATDWREGTEHLCEQAVLKLRRHRERRKARDASRLADNTAIWETLGSHA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PESAASDGPGIEEDAPDPDAWMKELFLDITKDTRRQIRNCEANVAIVLSKSPEWRGVFRF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEH NEVTKKLEVEGGPLGPSVDIETLDVLVANWIQLSKYGRLGLMPKAHVVAQQILAVAKRNS HHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC YDPVADYLGGLVWDGTPRLDGMLATYFGAQGDARYLQAVGAKFAISAVARALRPGCKVDT CCHHHHHHCCEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE VMILEGPQGLRKSTAFSILGGRHFSDAPIDVTSRDSAMLASQFWFIELAELSTFRKSEDQ EEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHEEHHHHHHHHCCHHH ALKAFITRTEDTYRPPYGRSNVQAPRRCVFVGTTNDDDYLRDPTGQRRFWPVKCSRIDTD HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHH ALKRDRDQIWAEAVVRFHQGEDWWLSNEEAAGAEQQAALRMENVGDSRKEVILRWILEMP HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCC PEKRPSDVTLLHVGIEAFALHPAQVDHRISREIGAALKSLGFTRGQRRMGDGKRPLVYYV CCCCCCCEEEEEECHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEC PDELRNAATEKRGERRAPFQVIAGSSAPHE CHHHHHHHHHHCCCCCCCEEEEECCCCCCC >Mature Secondary Structure GERAPVPHDAGRLAATAEPFAESARMYQWRRAPPAAYARLTIPWATRKIRTHLPDAMHV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCCCCC PHTHPAPVALLAEPFAESAPIYPGMSHAPDTTRLRALRLKVAFYASAQDNIPQAAELSWP CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHEEEEEEEECCCCCCCCHHCCCCH ELSAKLITHRRSQCPTSPCVRGCPAKNGPAWSPVNIVERRRSENVRAVTVAVFDLDHLTA HHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEEEEECHHHHH AQLACLDAVERHGLAFAVHSTHSNRPPEDYCLRLVMPLSRPVPPREWPSVREAAIRMLGL HHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC PADPATKDLARIYYLPDAPVGAEPYTASGDGAPLDVDALLAMSRAGLPTVAAPVPSPKPE CCCCCHHCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCC EPADLYELRALLRRIRKPEHLAIVRRALAGEPLAAVGEQDTTLNTLMSCAAFVLPLSTPE CCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCH AVVIELFRASFAATDWREGTEHLCEQAVLKLRRHRERRKARDASRLADNTAIWETLGSHA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PESAASDGPGIEEDAPDPDAWMKELFLDITKDTRRQIRNCEANVAIVLSKSPEWRGVFRF CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEH NEVTKKLEVEGGPLGPSVDIETLDVLVANWIQLSKYGRLGLMPKAHVVAQQILAVAKRNS HHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC YDPVADYLGGLVWDGTPRLDGMLATYFGAQGDARYLQAVGAKFAISAVARALRPGCKVDT CCHHHHHHCCEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE VMILEGPQGLRKSTAFSILGGRHFSDAPIDVTSRDSAMLASQFWFIELAELSTFRKSEDQ EEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHEEHHHHHHHHCCHHH ALKAFITRTEDTYRPPYGRSNVQAPRRCVFVGTTNDDDYLRDPTGQRRFWPVKCSRIDTD HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCHH ALKRDRDQIWAEAVVRFHQGEDWWLSNEEAAGAEQQAALRMENVGDSRKEVILRWILEMP HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCC PEKRPSDVTLLHVGIEAFALHPAQVDHRISREIGAALKSLGFTRGQRRMGDGKRPLVYYV CCCCCCCEEEEEECHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEC PDELRNAATEKRGERRAPFQVIAGSSAPHE CHHHHHHHHHHCCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA