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The map label for this gene is yhdJ [C]

Identifier: 108756876

GI number: 108756876

Start: 1417446

End: 1418717

Strand: Reverse

Name: yhdJ [C]

Synonym: MXAN_1208

Alternate gene names: 108756876

Gene position: 1418717-1417446 (Counterclockwise)

Preceding gene: 108758767

Following gene: 108763916

Centisome position: 15.52

GC content: 68.47

Gene sequence:

>1272_bases
GTGAGTCACTCGCAAAACCCGCACGCATTTACCGTGCATGAACAACAAGCTACTCACCAACCGTGCGGCGCTCTTCGTTG
GAGATGCCGCGCGGGTGGGCGAGGTTCTCGCGCCAGACAGCGTCGACGCCATTGTCACCGACCCACCGGCCGGAATCGGC
TTCATGGGTCGCGAGTGGGACAGCGACAAGGGCGGGCGCGACGCGTGGATTGCGTGGCTCTCCGGCGTGATGCGCGAAGC
TCTGCGGGTGCTCAAGCCAGGGGACACGCGCTCGTCTGGGCCCTGCCGCGAACGTCGCACTGGACGGCAACGGCGCTGGA
GGACGCGGGCTTCGAGATTCGCGATGTCGTGACGCACCTATTCGGCACGGGGTTCCCGAAGTCCCTCAACGTCAGCAAGG
CACTCGACGCAGCGGCGGGCGCTCAGCGGCGCGTCGTCGGCCCGGGGAAGTACGCGAACCGGGGGCGACGCTCCGATAAC
CAGGTCTACAGCTCGGGCACGCCCTCTCACCTGGAAGTCGAGACGCTTCCGGCCACGGACGCCGCTCGCGAATGGGAGGG
CTGGGGAACGGCGCTCAAGCCCGCCGCTGAGCACTGGATTCTCTGCCGAAAGCCCCTCGGGGGCACTGTCGCCGCGAACG
TCCAGCGCTGGCGCACGGGGGCGCTCAACGTCGCCGCGTGCCGAACCCCCCACGCAGACCCGACGGACCTCGCCGAATCG
AAGGCGCGTAACCCTGGGCGGCCTGACACGGTGACGAGCGCCGTCTACGGCACCGGACGCCCGCAGCAGCGAGTCGACGA
ATCCGGGCGCTGGCCAGCGAATGTCACGCTCGACGAATCGGCGGCCGAGCTGCTCGACGGGCAAGCGACGAATGGCGGCG
CGAGCCGGTTCTTCTACATCGCCAAGCCCACCAGGACGGAGCGGGACACGGGCTGTGCCCACCTGCCGTTCCGCACGGGT
GCCGAAGCGTGCGGGCGCAAGGAAGGCAGCGCGGGGATGAACTCGCCACGCGCGGGGGCGAACTCAGGAGGCGGGCGCAA
CCACCATCCGACGGTGAAGTCGCTCGCGCTGATGCGCTGGCTTTGTCGGCTCATCACGCCCCCGGGCGGGACGGTTCTCG
ACCTGTTCGCGGGTAGCGGCTCGACAGGTGTCGCGGCGCTCGCCGAGGGCTTCGATTTCATCGGCATCGAGCGCGAGCCC
GCATATGCGGAGATTGCGCACGCACGTCTGTGTCATGCGATTGAGCCACTCCCGAAATCCGCACGCATTTAG

Upstream 100 bases:

>100_bases
TCTACTACGTCCCGGATGAGCTTCGGAACGCCGCCACGGAGAAGCGGGGCGAGCGACGCGCGCCATTCCAGGTCATCGCG
GGCAGCTCGGCGCCGCATGA

Downstream 100 bases:

>100_bases
AGAAGGTGACGCCTTCCGTCGACCTCCCCAAGCACGGCCCCTCGGTGATCGCCGGGGTCATCCAGCGACTGAGCGTTTCC
CAGCTCAAGCGCCACAAGCT

Product: modification methylase

Products: S-Adenosyl-L-Homocysteine; DNA 6-Methylaminopurine. [C]

Alternate protein names: DNA Methylase; Methylase; DNA Methylase N-4/N-6 Domain-Containing Protein; DNA Methylase; Site-Specific DNA Methyltransferase

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MSHSQNPHAFTVHEQQATHQPCGALRWRCRAGGRGSRARQRRRHCHRPTGRNRLHGSRVGQRQGRARRVDCVALRRDARS
SAGAQARGHALVWALPRTSHWTATALEDAGFEIRDVVTHLFGTGFPKSLNVSKALDAAAGAQRRVVGPGKYANRGRRSDN
QVYSSGTPSHLEVETLPATDAAREWEGWGTALKPAAEHWILCRKPLGGTVAANVQRWRTGALNVAACRTPHADPTDLAES
KARNPGRPDTVTSAVYGTGRPQQRVDESGRWPANVTLDESAAELLDGQATNGGASRFFYIAKPTRTERDTGCAHLPFRTG
AEACGRKEGSAGMNSPRAGANSGGGRNHHPTVKSLALMRWLCRLITPPGGTVLDLFAGSGSTGVAALAEGFDFIGIEREP
AYAEIAHARLCHAIEPLPKSARI

Sequences:

>Translated_423_residues
MSHSQNPHAFTVHEQQATHQPCGALRWRCRAGGRGSRARQRRRHCHRPTGRNRLHGSRVGQRQGRARRVDCVALRRDARS
SAGAQARGHALVWALPRTSHWTATALEDAGFEIRDVVTHLFGTGFPKSLNVSKALDAAAGAQRRVVGPGKYANRGRRSDN
QVYSSGTPSHLEVETLPATDAAREWEGWGTALKPAAEHWILCRKPLGGTVAANVQRWRTGALNVAACRTPHADPTDLAES
KARNPGRPDTVTSAVYGTGRPQQRVDESGRWPANVTLDESAAELLDGQATNGGASRFFYIAKPTRTERDTGCAHLPFRTG
AEACGRKEGSAGMNSPRAGANSGGGRNHHPTVKSLALMRWLCRLITPPGGTVLDLFAGSGSTGVAALAEGFDFIGIEREP
AYAEIAHARLCHAIEPLPKSARI
>Mature_422_residues
SHSQNPHAFTVHEQQATHQPCGALRWRCRAGGRGSRARQRRRHCHRPTGRNRLHGSRVGQRQGRARRVDCVALRRDARSS
AGAQARGHALVWALPRTSHWTATALEDAGFEIRDVVTHLFGTGFPKSLNVSKALDAAAGAQRRVVGPGKYANRGRRSDNQ
VYSSGTPSHLEVETLPATDAAREWEGWGTALKPAAEHWILCRKPLGGTVAANVQRWRTGALNVAACRTPHADPTDLAESK
ARNPGRPDTVTSAVYGTGRPQQRVDESGRWPANVTLDESAAELLDGQATNGGASRFFYIAKPTRTERDTGCAHLPFRTGA
EACGRKEGSAGMNSPRAGANSGGGRNHHPTVKSLALMRWLCRLITPPGGTVLDLFAGSGSTGVAALAEGFDFIGIEREPA
YAEIAHARLCHAIEPLPKSARI

Specific function: Unknown

COG id: COG0863

COG function: function code L; DNA modification methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.1.1.72 [C]

Molecular weight: Translated: 45575; Mature: 45443

Theoretical pI: Translated: 11.09; Mature: 11.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHSQNPHAFTVHEQQATHQPCGALRWRCRAGGRGSRARQRRRHCHRPTGRNRLHGSRVG
CCCCCCCCEEEEEHHHHCCCCHHHHHEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHH
QRQGRARRVDCVALRRDARSSAGAQARGHALVWALPRTSHWTATALEDAGFEIRDVVTHL
HHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCHHHHHHHHH
FGTGFPKSLNVSKALDAAAGAQRRVVGPGKYANRGRRSDNQVYSSGTPSHLEVETLPATD
HCCCCCCCCCHHHHHHHHCCCCCEECCCCHHHHCCCCCCCCEECCCCCCEEEEEECCCCC
AAREWEGWGTALKPAAEHWILCRKPLGGTVAANVQRWRTGALNVAACRTPHADPTDLAES
CHHHHHCCCCHHCHHHHHEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHH
KARNPGRPDTVTSAVYGTGRPQQRVDESGRWPANVTLDESAAELLDGQATNGGASRFFYI
HCCCCCCCCHHHHHHHCCCCCHHHHHCCCCCCCCEEECHHHHHHHCCCCCCCCCCEEEEE
AKPTRTERDTGCAHLPFRTGAEACGRKEGSAGMNSPRAGANSGGGRNHHPTVKSLALMRW
ECCCCCCCCCCCEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LCRLITPPGGTVLDLFAGSGSTGVAALAEGFDFIGIEREPAYAEIAHARLCHAIEPLPKS
HHHHHCCCCCCEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCC
ARI
CCC
>Mature Secondary Structure 
SHSQNPHAFTVHEQQATHQPCGALRWRCRAGGRGSRARQRRRHCHRPTGRNRLHGSRVG
CCCCCCCEEEEEHHHHCCCCHHHHHEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHH
QRQGRARRVDCVALRRDARSSAGAQARGHALVWALPRTSHWTATALEDAGFEIRDVVTHL
HHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCHHHHHHHHH
FGTGFPKSLNVSKALDAAAGAQRRVVGPGKYANRGRRSDNQVYSSGTPSHLEVETLPATD
HCCCCCCCCCHHHHHHHHCCCCCEECCCCHHHHCCCCCCCCEECCCCCCEEEEEECCCCC
AAREWEGWGTALKPAAEHWILCRKPLGGTVAANVQRWRTGALNVAACRTPHADPTDLAES
CHHHHHCCCCHHCHHHHHEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHH
KARNPGRPDTVTSAVYGTGRPQQRVDESGRWPANVTLDESAAELLDGQATNGGASRFFYI
HCCCCCCCCHHHHHHHCCCCCHHHHHCCCCCCCCEEECHHHHHHHCCCCCCCCCCEEEEE
AKPTRTERDTGCAHLPFRTGAEACGRKEGSAGMNSPRAGANSGGGRNHHPTVKSLALMRW
ECCCCCCCCCCCEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
LCRLITPPGGTVLDLFAGSGSTGVAALAEGFDFIGIEREPAYAEIAHARLCHAIEPLPKS
HHHHHCCCCCCEEEEECCCCCCHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCC
ARI
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; DNA Adenine; DNA [C]

Specific reaction: S-Adenosyl-L-Methionine + DNA Adenine = S-Adenosyl-L-Homocysteine + DNA 6-Methylaminopurine. Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA