| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758676
Identifier: 108758676
GI number: 108758676
Start: 3514680
End: 3516269
Strand: Direct
Name: 108758676
Synonym: MXAN_2994
Alternate gene names: NA
Gene position: 3514680-3516269 (Clockwise)
Preceding gene: 108760131
Following gene: 108761525
Centisome position: 38.45
GC content: 67.17
Gene sequence:
>1590_bases ATGAGCCTGGGCTCCCTCGCGTTGGTGCTCCACGCGCACCTTCCCTTCGTTCGGCACCCCGAGCATGAGGATTTCCTCGA GGAGGACTGGCTCTACGAGGCCATCTCCGAGACGTACCTCCCGCTGCTCCAGGTCTTCGACGGACTGGCGGAGGACGGCG TCCCGTTCCGCCTCGCGATGACGCTGTCTCCAACGCTCGTCTCCATGCTGCGCGACGAGCTGCTGATGAGCCGCTACGCA CGGCGGCTGGACCTGCTCTGCGAACTGGGCGCGCGAGAGGTGCATCGGACGCGAGACGACGCCACCTTCGGCCCCATTGC CCGCTTCTACCGGGACCACTTCGAGTCCCTGCGCCGCGCGTTCCATGACCGCTACAAGCGCGACCTCGTCGCCGCGTTCC GGCGGCTCCAGGACGCGGGCTACCTGGACATCCTCACCTGCAACGCGACACACGGTTTCCTGCCGTTGATGCAGCAGGTG CCCGAAGCCGTCCGCGCGCAGGTGACGGTGGCCGCGAACCACTACCGCCAGCACTTCGGCAGGGACCCCGCCGGCATCTG GCTCGCCGAGTGCGGCTACTACCCGGGCCTGGATCGCCTGCTGGCGAGCGAGCGCATTCGTTACTTCTTCGTCGATACGC ACGGCCTGACGGACGCCGTGCCCCGGCCCCTGCATGGCCCCTACGCACCCGTCTTCACCGAGGCGGGCGTCGCCGCGTAT GCCCGAGACCCGGAGAGCAGCCAGCAGGTGTGGAGCACCGAGCACGGCTACCCGGGCGACCCGGACTACCGCGAGTTCTA CCGGGACATCGGCTGGGACCTGGACCTGGACTACATCCGCCCGTTCATCCAGCCCACCGGCGAGCGCAAGAACACCGGCT TCAAGTACTTCCGCATCACCGGGAAGACGAACGAGAAGCGCCCCTATGATCCGCTCGCCGCGCGTGAGCGGGCCTCGGTG CATGCGGGCAACTTCCTCTTCAACCGCCAACGGCAGATTGAAGACCTGGCCTCGCGCCTGGGCGGCAGGGAGCCGGTGGT CGTCGCGCCCTATGACGCCGAGCTCTTCGGCCACTGGTGGTTCGAGGGGCCCCAGTTCCTCGACTTCCTCATCCGCAAGG TCGCGTATGACCAGAAGACGTTCCGGCTGGTGACGCCGTTGGATGACCTGCGGGAGCACCCGGAGAATCAGGTGGCGACG CCGCCGCTGTCCTCGTGGGGCGCGGGCGGTTACGCCAACATGTGGCTCGACGGCAGCAATGATTGGATCTACCGCCACCT CAATCACTGCGCGAAGCAGATGGTGGAACTGGCGCGTGACTTCCCGGATGCCGGTGAGCTGCAACGTCGCGCGCTCAATC AGGCGGCCAGGGAGCTGCTGCTCGCCCAGTCCTCCGACTGGGCCTTCATCATGAAGACGGGCACCATGGTGGAGTACGCC CAGCGCCGCACGCGCGAGCACATCCTGCGCTTCCAGCGCCTGCACGAGCAGCTACGCGGCGGCAGTCTGGACGAGGGCTG GCTCTCTCTCGTGGAGGGGCGGGACAACCTCTATCCAGAGCTGGACTACCGCCTCTATCTGCCTGCCTGA
Upstream 100 bases:
>100_bases CGCGAGGACCACGCCACCCACGACGCGGCGGAGCCGCCTCCCCGGAAGCCGCCTTCGGACGACGGCCGCTCCTGAACCCG CACGGAGACATTGAACGACC
Downstream 100 bases:
>100_bases GGCCAGGGGGGAGTAGGGTGGGGTGATGTGTCCTCCTGTCGCCACGTCAGACGGTTTGGCTTGCGGGGCTGGTTTTCGGC TTTAGCTTGGTCTGCATATG
Product: glycosy hydrolase family protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Alpha-Amylase; (1-_4)-Alpha-D-Glucan Branching; Family; Glycogen Branching; Glycosyl Transferase/Glycoside Hydrolase-Like Protein; Glycosyl Hydrolase Family Protein
Number of amino acids: Translated: 529; Mature: 528
Protein sequence:
>529_residues MSLGSLALVLHAHLPFVRHPEHEDFLEEDWLYEAISETYLPLLQVFDGLAEDGVPFRLAMTLSPTLVSMLRDELLMSRYA RRLDLLCELGAREVHRTRDDATFGPIARFYRDHFESLRRAFHDRYKRDLVAAFRRLQDAGYLDILTCNATHGFLPLMQQV PEAVRAQVTVAANHYRQHFGRDPAGIWLAECGYYPGLDRLLASERIRYFFVDTHGLTDAVPRPLHGPYAPVFTEAGVAAY ARDPESSQQVWSTEHGYPGDPDYREFYRDIGWDLDLDYIRPFIQPTGERKNTGFKYFRITGKTNEKRPYDPLAARERASV HAGNFLFNRQRQIEDLASRLGGREPVVVAPYDAELFGHWWFEGPQFLDFLIRKVAYDQKTFRLVTPLDDLREHPENQVAT PPLSSWGAGGYANMWLDGSNDWIYRHLNHCAKQMVELARDFPDAGELQRRALNQAARELLLAQSSDWAFIMKTGTMVEYA QRRTREHILRFQRLHEQLRGGSLDEGWLSLVEGRDNLYPELDYRLYLPA
Sequences:
>Translated_529_residues MSLGSLALVLHAHLPFVRHPEHEDFLEEDWLYEAISETYLPLLQVFDGLAEDGVPFRLAMTLSPTLVSMLRDELLMSRYA RRLDLLCELGAREVHRTRDDATFGPIARFYRDHFESLRRAFHDRYKRDLVAAFRRLQDAGYLDILTCNATHGFLPLMQQV PEAVRAQVTVAANHYRQHFGRDPAGIWLAECGYYPGLDRLLASERIRYFFVDTHGLTDAVPRPLHGPYAPVFTEAGVAAY ARDPESSQQVWSTEHGYPGDPDYREFYRDIGWDLDLDYIRPFIQPTGERKNTGFKYFRITGKTNEKRPYDPLAARERASV HAGNFLFNRQRQIEDLASRLGGREPVVVAPYDAELFGHWWFEGPQFLDFLIRKVAYDQKTFRLVTPLDDLREHPENQVAT PPLSSWGAGGYANMWLDGSNDWIYRHLNHCAKQMVELARDFPDAGELQRRALNQAARELLLAQSSDWAFIMKTGTMVEYA QRRTREHILRFQRLHEQLRGGSLDEGWLSLVEGRDNLYPELDYRLYLPA >Mature_528_residues SLGSLALVLHAHLPFVRHPEHEDFLEEDWLYEAISETYLPLLQVFDGLAEDGVPFRLAMTLSPTLVSMLRDELLMSRYAR RLDLLCELGAREVHRTRDDATFGPIARFYRDHFESLRRAFHDRYKRDLVAAFRRLQDAGYLDILTCNATHGFLPLMQQVP EAVRAQVTVAANHYRQHFGRDPAGIWLAECGYYPGLDRLLASERIRYFFVDTHGLTDAVPRPLHGPYAPVFTEAGVAAYA RDPESSQQVWSTEHGYPGDPDYREFYRDIGWDLDLDYIRPFIQPTGERKNTGFKYFRITGKTNEKRPYDPLAARERASVH AGNFLFNRQRQIEDLASRLGGREPVVVAPYDAELFGHWWFEGPQFLDFLIRKVAYDQKTFRLVTPLDDLREHPENQVATP PLSSWGAGGYANMWLDGSNDWIYRHLNHCAKQMVELARDFPDAGELQRRALNQAARELLLAQSSDWAFIMKTGTMVEYAQ RRTREHILRFQRLHEQLRGGSLDEGWLSLVEGRDNLYPELDYRLYLPA
Specific function: Unknown
COG id: COG1543
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61297; Mature: 61166
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLGSLALVLHAHLPFVRHPEHEDFLEEDWLYEAISETYLPLLQVFDGLAEDGVPFRLAM CCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE TLSPTLVSMLRDELLMSRYARRLDLLCELGAREVHRTRDDATFGPIARFYRDHFESLRRA ECCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH FHDRYKRDLVAAFRRLQDAGYLDILTCNATHGFLPLMQQVPEAVRAQVTVAANHYRQHFG HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC RDPAGIWLAECGYYPGLDRLLASERIRYFFVDTHGLTDAVPRPLHGPYAPVFTEAGVAAY CCCCCEEHHHCCCCCCHHHHHHHCCEEEEEEECCCCCHHCCCCCCCCCCCHHHHCCCHHH ARDPESSQQVWSTEHGYPGDPDYREFYRDIGWDLDLDYIRPFIQPTGERKNTGFKYFRIT CCCCCHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEE GKTNEKRPYDPLAARERASVHAGNFLFNRQRQIEDLASRLGGREPVVVAPYDAELFGHWW CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHH FEGPQFLDFLIRKVAYDQKTFRLVTPLDDLREHPENQVATPPLSSWGAGGYANMWLDGSN CCCHHHHHHHHHHHHCCCCCEEEECCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCC DWIYRHLNHCAKQMVELARDFPDAGELQRRALNQAARELLLAQSSDWAFIMKTGTMVEYA CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHH QRRTREHILRFQRLHEQLRGGSLDEGWLSLVEGRDNLYPELDYRLYLPA HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEECCC >Mature Secondary Structure SLGSLALVLHAHLPFVRHPEHEDFLEEDWLYEAISETYLPLLQVFDGLAEDGVPFRLAM CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE TLSPTLVSMLRDELLMSRYARRLDLLCELGAREVHRTRDDATFGPIARFYRDHFESLRRA ECCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH FHDRYKRDLVAAFRRLQDAGYLDILTCNATHGFLPLMQQVPEAVRAQVTVAANHYRQHFG HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC RDPAGIWLAECGYYPGLDRLLASERIRYFFVDTHGLTDAVPRPLHGPYAPVFTEAGVAAY CCCCCEEHHHCCCCCCHHHHHHHCCEEEEEEECCCCCHHCCCCCCCCCCCHHHHCCCHHH ARDPESSQQVWSTEHGYPGDPDYREFYRDIGWDLDLDYIRPFIQPTGERKNTGFKYFRIT CCCCCHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEE GKTNEKRPYDPLAARERASVHAGNFLFNRQRQIEDLASRLGGREPVVVAPYDAELFGHWW CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHH FEGPQFLDFLIRKVAYDQKTFRLVTPLDDLREHPENQVATPPLSSWGAGGYANMWLDGSN CCCHHHHHHHHHHHHCCCCCEEEECCHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCC DWIYRHLNHCAKQMVELARDFPDAGELQRRALNQAARELLLAQSSDWAFIMKTGTMVEYA CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHH QRRTREHILRFQRLHEQLRGGSLDEGWLSLVEGRDNLYPELDYRLYLPA HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA