| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is dhaT [H]
Identifier: 108758582
GI number: 108758582
Start: 3364629
End: 3365807
Strand: Reverse
Name: dhaT [H]
Synonym: MXAN_2881
Alternate gene names: 108758582
Gene position: 3365807-3364629 (Counterclockwise)
Preceding gene: 108759163
Following gene: 108761410
Centisome position: 36.83
GC content: 72.69
Gene sequence:
>1179_bases GTGACGGACGTGAGCGCTTCTTCCTCGTTCGAGTTCGCCACCGCCACCCGCGTCGTCTTCGGCCCGGGCCGCCTGGCCGA GGCACCCGAAATCATTCGCGGCCTCGGGGGCTCCCGGGTGCTGCTCGTCACCGGCGCGAATCCCTCCCGCGCACGGCCCC TCCACGACGCATTGGAGCGCCTGGGCCTGGGGGTGACTGTCTTCTCCGTGGACGGCGAGCCCACCGTGGAGCGTGCTCGT GAAGGCACCGCGCGCGTCGCGGAAGCGGGCTGTGATGTGGTGGTGGCCCTGGGCGGAGGCAGCGCGTTGGACGCGGGCAA GGCCATTGCAGCGCTCGCCGCCAACGGGGGCGACCCGCTGGACTACCTGGAAGTCATTGGCCGGGGCCAGCCGCTCACCC GCCCGTCCCTGCCCTTCATGGCCATCCCCACCACGGCCGGCACGGGCTCCGAGGTGACGCGCAACGCGGTGCTGGGCTCG AAGGACGCGAAGGCGAAGGCCAGCCTGCGCAGTCCACACATGCTGCCGCGCGTGGCGCTGGTGGACCCGGACCTGCTCAC GGGGGCACCGGCCGCCGTGCTTGCATCCAGTGGCATGGACGCGCTGTCGCAGCTCATCGAGCCCTACCTCTCCGCGCGCG CCAACCCGCTGACGGACGCGCTGGCACGCGAGGGCCTGCGAAGGTCGGCCCGCTCGCTGCGGCGCGCGGTGCTGGACGGT CCGGATGCGCCCGCCCGCGAGGACCTGGCCCTGGCCAGTCTCTTCGGCGGTCTGTGTCTGGCCAATGCGGGCCTGGGCGC GGTGCACGGCTTCGCCGCGCCCCTGGGTGGCATGTTCGACGCGCCCCACGGCGCGGTGTGCGCGGCATTGCTGCCAGCGG TGTTGGACGTCAACCTGCGCGCGCTGCGGGCCCGTGCGCCAACGCATCCATCACTGCCCCGGGTGCAGGAGTTGGCGGCG CTGCTGACGGGGCGGGTGGATGCAAGGGCCGAGGACGCCGTCACGTGGGTGGACGAACTTCGCGCGGCGCTGGGCGTACC GGGGCTGGGACGCTACGGGCTGACGGAGGCCCAGGTACCAGCGCTGGTGGCGAAGGCCAAGGAGGCCAGCAGCATGAAGG CCAACCCCCTGGTGCTCACCGACGCAGAGCTGGCGGAAATCGCCAGCCGGTCGCTGTAG
Upstream 100 bases:
>100_bases CGGCGCACTACCTCACATGGCGCGACACCGTGGCTCCGATGATGTCAGAGCCCCGCACCAGCCGGAAGTTCGTCAACCGC TTCCCTGAAGACGCCGGGTG
Downstream 100 bases:
>100_bases GACCCGCGCCGTTACACCTTGTAGAGCAGGTCCATGTACTTCTTGAGCAGGTCGCTCACCAGACCGCGGAAGGGCACGGA GGCCGCCATGCCGTACACGG
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: 1,3-propanediol oxidoreductase; 3-hydroxypropionaldehyde reductase [H]
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MTDVSASSSFEFATATRVVFGPGRLAEAPEIIRGLGGSRVLLVTGANPSRARPLHDALERLGLGVTVFSVDGEPTVERAR EGTARVAEAGCDVVVALGGGSALDAGKAIAALAANGGDPLDYLEVIGRGQPLTRPSLPFMAIPTTAGTGSEVTRNAVLGS KDAKAKASLRSPHMLPRVALVDPDLLTGAPAAVLASSGMDALSQLIEPYLSARANPLTDALAREGLRRSARSLRRAVLDG PDAPAREDLALASLFGGLCLANAGLGAVHGFAAPLGGMFDAPHGAVCAALLPAVLDVNLRALRARAPTHPSLPRVQELAA LLTGRVDARAEDAVTWVDELRAALGVPGLGRYGLTEAQVPALVAKAKEASSMKANPLVLTDAELAEIASRSL
Sequences:
>Translated_392_residues MTDVSASSSFEFATATRVVFGPGRLAEAPEIIRGLGGSRVLLVTGANPSRARPLHDALERLGLGVTVFSVDGEPTVERAR EGTARVAEAGCDVVVALGGGSALDAGKAIAALAANGGDPLDYLEVIGRGQPLTRPSLPFMAIPTTAGTGSEVTRNAVLGS KDAKAKASLRSPHMLPRVALVDPDLLTGAPAAVLASSGMDALSQLIEPYLSARANPLTDALAREGLRRSARSLRRAVLDG PDAPAREDLALASLFGGLCLANAGLGAVHGFAAPLGGMFDAPHGAVCAALLPAVLDVNLRALRARAPTHPSLPRVQELAA LLTGRVDARAEDAVTWVDELRAALGVPGLGRYGLTEAQVPALVAKAKEASSMKANPLVLTDAELAEIASRSL >Mature_391_residues TDVSASSSFEFATATRVVFGPGRLAEAPEIIRGLGGSRVLLVTGANPSRARPLHDALERLGLGVTVFSVDGEPTVERARE GTARVAEAGCDVVVALGGGSALDAGKAIAALAANGGDPLDYLEVIGRGQPLTRPSLPFMAIPTTAGTGSEVTRNAVLGSK DAKAKASLRSPHMLPRVALVDPDLLTGAPAAVLASSGMDALSQLIEPYLSARANPLTDALAREGLRRSARSLRRAVLDGP DAPAREDLALASLFGGLCLANAGLGAVHGFAAPLGGMFDAPHGAVCAALLPAVLDVNLRALRARAPTHPSLPRVQELAAL LTGRVDARAEDAVTWVDELRAALGVPGLGRYGLTEAQVPALVAKAKEASSMKANPLVLTDAELAEIASRSL
Specific function: Most active with substrates containing two primary alcohol groups separated by one or two carbon atoms. In the physiological direction, 3-hydroxypropionaldehyde is the preferred substrate [H]
COG id: COG1454
COG function: function code C; Alcohol dehydrogenase, class IV
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=394, Percent_Identity=32.2335025380711, Blast_Score=134, Evalue=2e-31, Organism=Escherichia coli, GI48994951, Length=394, Percent_Identity=35.0253807106599, Blast_Score=192, Evalue=4e-50, Organism=Escherichia coli, GI87082107, Length=311, Percent_Identity=39.5498392282958, Blast_Score=165, Evalue=4e-42, Organism=Escherichia coli, GI1789163, Length=373, Percent_Identity=32.4396782841823, Blast_Score=161, Evalue=6e-41, Organism=Escherichia coli, GI1787493, Length=401, Percent_Identity=29.426433915212, Blast_Score=127, Evalue=2e-30, Organism=Escherichia coli, GI1789386, Length=375, Percent_Identity=27.2, Blast_Score=100, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17537053, Length=299, Percent_Identity=31.438127090301, Blast_Score=135, Evalue=3e-32, Organism=Saccharomyces cerevisiae, GI6321181, Length=378, Percent_Identity=32.5396825396825, Blast_Score=189, Evalue=1e-48, Organism=Drosophila melanogaster, GI24657991, Length=426, Percent_Identity=29.3427230046948, Blast_Score=112, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: =1.1.1.202 [H]
Molecular weight: Translated: 40039; Mature: 39908
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS00913 ADH_IRON_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDVSASSSFEFATATRVVFGPGRLAEAPEIIRGLGGSRVLLVTGANPSRARPLHDALER CCCCCCCCCCCHHHEEEEEECCCCCCCCHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHH LGLGVTVFSVDGEPTVERAREGTARVAEAGCDVVVALGGGSALDAGKAIAALAANGGDPL HCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCHH DYLEVIGRGQPLTRPSLPFMAIPTTAGTGSEVTRNAVLGSKDAKAKASLRSPHMLPRVAL HHHHHHCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCCEEEE VDPDLLTGAPAAVLASSGMDALSQLIEPYLSARANPLTDALAREGLRRSARSLRRAVLDG ECCHHHCCCCHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC PDAPAREDLALASLFGGLCLANAGLGAVHGFAAPLGGMFDAPHGAVCAALLPAVLDVNLR CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCHHH ALRARAPTHPSLPRVQELAALLTGRVDARAEDAVTWVDELRAALGVPGLGRYGLTEAQVP HHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH ALVAKAKEASSMKANPLVLTDAELAEIASRSL HHHHHHHHHCCCCCCCEEEECHHHHHHHHCCC >Mature Secondary Structure TDVSASSSFEFATATRVVFGPGRLAEAPEIIRGLGGSRVLLVTGANPSRARPLHDALER CCCCCCCCCCHHHEEEEEECCCCCCCCHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHH LGLGVTVFSVDGEPTVERAREGTARVAEAGCDVVVALGGGSALDAGKAIAALAANGGDPL HCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCHH DYLEVIGRGQPLTRPSLPFMAIPTTAGTGSEVTRNAVLGSKDAKAKASLRSPHMLPRVAL HHHHHHCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCCEEEE VDPDLLTGAPAAVLASSGMDALSQLIEPYLSARANPLTDALAREGLRRSARSLRRAVLDG ECCHHHCCCCHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC PDAPAREDLALASLFGGLCLANAGLGAVHGFAAPLGGMFDAPHGAVCAALLPAVLDVNLR CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCHHH ALRARAPTHPSLPRVQELAALLTGRVDARAEDAVTWVDELRAALGVPGLGRYGLTEAQVP HHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH ALVAKAKEASSMKANPLVLTDAELAEIASRSL HHHHHHHHHCCCCCCCEEEECHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7721705 [H]