| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is dcp [H]
Identifier: 108758552
GI number: 108758552
Start: 2654645
End: 2656858
Strand: Direct
Name: dcp [H]
Synonym: MXAN_2286
Alternate gene names: 108758552
Gene position: 2654645-2656858 (Clockwise)
Preceding gene: 108761431
Following gene: 108762096
Centisome position: 29.05
GC content: 68.07
Gene sequence:
>2214_bases ATGCGTAAGCTCTTCTTCGCTGGCGCGGGCATGGCCGTACTCGTGTCCACCGGCTGTGCGACGACCTCGCAGGAGTCCCA GAACTTGGCCACCGCGCCCCAGACGACCGCCCCCGCCGCGCCGGCTGCTCCGGAGCAGACCAACCCGCTGATCGCGAAGT GGACGGGCGCCCATGGCGGCGTTCCGCCGTTCGACCAGGTGAAGGTGGAGCTCTTCAAGCCAGCGCTCGAGGCCGCGATG GAGCGGACGCGCGGCGAACTGGCGGCCATCGCGAACGACACCTCGGCGCCCACGTTCGAGAACACCATCGTCGCGCTGGA GTCCGCCGGCAAGACGCAGGGCGAAGTGGAGACGCTCTACGGCATCTGGAGCTCGTCCATGAGCGGGCCGGAGTTCCAGG CGCTGGAGCGGGAGATGGCGCCGAAGCTGGCCGCCTTCGACGACGAAATCTTCCAGAACGAGGCGCTCTTCCGCCGCATC GAGGCGGTGTACCAGTCGCCCGACAAGGCGAAGCTGACGCCCGAGCAGCAGCGGCTCACCTGGCTGCACTACACGCGCTT CGTCCGCTCCGGCGCGAAGCTGGACGCGGCGGCCAAGCAGAAGCTGGCGGCCATCAACCAGCGGCTGGCGTCGCTCTACA CGTCCTTCAGCCAGAACGTGCTCGCGGACGAAGAGGGCTACACCGTCGTCCTGGAGTCCGAGGCGGACCTGGCGGGCCTG CCGGACTCCGTGCGCGCGGGCGCCGCCGCCGCGGCCGAGTCGCGCGGTCAGAAGGGCAAGTGGCTCATCACCAACACGCG CTCCTCCATGGAGCCGTTCCTGACGTACTCGTCGCGGCGCGACCTGCGCGAGAAGGTCTGGCGCAACTACGTCAACCGAG GTGACAACGGCGACGCGCGCGACAACAACGTCATCATCGCCGAAGTCCTGAAGCTGCGCGCCGAGCGCGCCACGCTGCTG GGCTACAAGACGCACGCGCACTGGCGGCTGGAGAACGCCATGGCCCGCACGCCCGAGCGCGCCATGGAGCTGATGGAGGC CGTCTGGAAGCCCGCGGTGGCCCGCGTTCACGAAGAGGTCGCGGACATGCAGCGCGTGGCCAACAAGGAGGGCGCGAAGC TCAAGATTGAACCCTGGGACTACCGCTACTACGCGGAGAAGGTCCGCAAGGCGAAGTACGACCTGGACCAGAACGAGGTG AAGCCCTACCTCCAGTTGGAGAAGCTGCGCGAGGGCATGTTCTGGGTGGCCGGCGAGCTGTTCGGCTTCTCCTTCACGCA GGTGAACGACGTGCCCGTGTTCCACCCCGACGTGCGCGTCTGGGAGGTGAAGGACCAGGCCAGCGGGCGTCACGTGGGCT TGTGGTACTTCGACCCGTACGCGCGCAAGGGCAAGCGCTCCGGCGCGTGGATGAACGCGTACCGCAGCCAGGAGCGGTTC CGGGGTGAAGTCACCACCATCGTCTCCAACAACTCCAACTTCGTGAAGGGCCAGCCCGGTGAGCCCGTCCTCATCAGCTG GGAGGATGCCTCCACGCTGTTCCACGAGTTCGGCCACGCGCTGCACGGCCTCAGCTCCAACGTGACGTACCCGTCGCTGG CCGGCACCGCGGTGGCGCGCGACTACGTGGAGTTCCCCTCGCAATTGCTGGAGCACTGGCTGTCCACGCCCGAGGTGCTG AACACCTACGCGCTGCACTACCAGACGGGGAAGCCCATTCCCCAGGCGCTGGTGGACCGCATCGAGAAGGCCGCCACCTT CAACCAGGGCTTCGGGACGGTGGAGTACCTGTCCAGCGCGCTGGTGGACATGAAGCTGCACCTGGCGGGGGCTACGCCCA TTGACGCGGACGCCTTCGAGCGCGACACGCTCAACGCGCTGGGCATGCCGAAGGAAATCGTCATGCGGCACCGCACGCCG CAGTTCGGCCACGTCTTCGCGGGTGACGGATACTCGGCGGGCTACTACAGCTACCTGTGGTCGGACACGCTGACGGCGGA CGCCTACGAGCGCTTCACCGAAGGCAAGGGCGCCTACGACAAGGACGTGGCCGCGCTCCTGCGCAAGCACGTCTTCTCCG TGGGCAACACGCTGGACCCGGCCGACGCGTACCGCGCCTTCCGGGGCCGTGAGGCGGGCATCCAGGCCCTGATGCGCAAG CGCGGCTTCCCCGTGCCTGCCGCGCAGGCCGCGCCGAAGAAGGCCGCGAAGTAG
Upstream 100 bases:
>100_bases GTTGGTGTGCCCGCGATTCCGTCCCCCGGTTCGCGACGCGATGCCGCTAGGCTGCGTCCCTCTTCAGGTAGCCCCCCTTT CGTCGGGAGACATCCTCTAC
Downstream 100 bases:
>100_bases TCGCCCGGTGGCGGGCCCGGGCTACCCCTCCAGCGGGAAGAAGTGGCTGAAGGGGCCCGGGCCCTTGCCCAGGGGCAGGG GGTGCTCCAGCGCGGCGGTG
Product: peptidyl-dipeptidase Dcp
Products: NA
Alternate protein names: Dipeptidyl carboxypeptidase [H]
Number of amino acids: Translated: 737; Mature: 737
Protein sequence:
>737_residues MRKLFFAGAGMAVLVSTGCATTSQESQNLATAPQTTAPAAPAAPEQTNPLIAKWTGAHGGVPPFDQVKVELFKPALEAAM ERTRGELAAIANDTSAPTFENTIVALESAGKTQGEVETLYGIWSSSMSGPEFQALEREMAPKLAAFDDEIFQNEALFRRI EAVYQSPDKAKLTPEQQRLTWLHYTRFVRSGAKLDAAAKQKLAAINQRLASLYTSFSQNVLADEEGYTVVLESEADLAGL PDSVRAGAAAAAESRGQKGKWLITNTRSSMEPFLTYSSRRDLREKVWRNYVNRGDNGDARDNNVIIAEVLKLRAERATLL GYKTHAHWRLENAMARTPERAMELMEAVWKPAVARVHEEVADMQRVANKEGAKLKIEPWDYRYYAEKVRKAKYDLDQNEV KPYLQLEKLREGMFWVAGELFGFSFTQVNDVPVFHPDVRVWEVKDQASGRHVGLWYFDPYARKGKRSGAWMNAYRSQERF RGEVTTIVSNNSNFVKGQPGEPVLISWEDASTLFHEFGHALHGLSSNVTYPSLAGTAVARDYVEFPSQLLEHWLSTPEVL NTYALHYQTGKPIPQALVDRIEKAATFNQGFGTVEYLSSALVDMKLHLAGATPIDADAFERDTLNALGMPKEIVMRHRTP QFGHVFAGDGYSAGYYSYLWSDTLTADAYERFTEGKGAYDKDVAALLRKHVFSVGNTLDPADAYRAFRGREAGIQALMRK RGFPVPAAQAAPKKAAK
Sequences:
>Translated_737_residues MRKLFFAGAGMAVLVSTGCATTSQESQNLATAPQTTAPAAPAAPEQTNPLIAKWTGAHGGVPPFDQVKVELFKPALEAAM ERTRGELAAIANDTSAPTFENTIVALESAGKTQGEVETLYGIWSSSMSGPEFQALEREMAPKLAAFDDEIFQNEALFRRI EAVYQSPDKAKLTPEQQRLTWLHYTRFVRSGAKLDAAAKQKLAAINQRLASLYTSFSQNVLADEEGYTVVLESEADLAGL PDSVRAGAAAAAESRGQKGKWLITNTRSSMEPFLTYSSRRDLREKVWRNYVNRGDNGDARDNNVIIAEVLKLRAERATLL GYKTHAHWRLENAMARTPERAMELMEAVWKPAVARVHEEVADMQRVANKEGAKLKIEPWDYRYYAEKVRKAKYDLDQNEV KPYLQLEKLREGMFWVAGELFGFSFTQVNDVPVFHPDVRVWEVKDQASGRHVGLWYFDPYARKGKRSGAWMNAYRSQERF RGEVTTIVSNNSNFVKGQPGEPVLISWEDASTLFHEFGHALHGLSSNVTYPSLAGTAVARDYVEFPSQLLEHWLSTPEVL NTYALHYQTGKPIPQALVDRIEKAATFNQGFGTVEYLSSALVDMKLHLAGATPIDADAFERDTLNALGMPKEIVMRHRTP QFGHVFAGDGYSAGYYSYLWSDTLTADAYERFTEGKGAYDKDVAALLRKHVFSVGNTLDPADAYRAFRGREAGIQALMRK RGFPVPAAQAAPKKAAK >Mature_737_residues MRKLFFAGAGMAVLVSTGCATTSQESQNLATAPQTTAPAAPAAPEQTNPLIAKWTGAHGGVPPFDQVKVELFKPALEAAM ERTRGELAAIANDTSAPTFENTIVALESAGKTQGEVETLYGIWSSSMSGPEFQALEREMAPKLAAFDDEIFQNEALFRRI EAVYQSPDKAKLTPEQQRLTWLHYTRFVRSGAKLDAAAKQKLAAINQRLASLYTSFSQNVLADEEGYTVVLESEADLAGL PDSVRAGAAAAAESRGQKGKWLITNTRSSMEPFLTYSSRRDLREKVWRNYVNRGDNGDARDNNVIIAEVLKLRAERATLL GYKTHAHWRLENAMARTPERAMELMEAVWKPAVARVHEEVADMQRVANKEGAKLKIEPWDYRYYAEKVRKAKYDLDQNEV KPYLQLEKLREGMFWVAGELFGFSFTQVNDVPVFHPDVRVWEVKDQASGRHVGLWYFDPYARKGKRSGAWMNAYRSQERF RGEVTTIVSNNSNFVKGQPGEPVLISWEDASTLFHEFGHALHGLSSNVTYPSLAGTAVARDYVEFPSQLLEHWLSTPEVL NTYALHYQTGKPIPQALVDRIEKAATFNQGFGTVEYLSSALVDMKLHLAGATPIDADAFERDTLNALGMPKEIVMRHRTP QFGHVFAGDGYSAGYYSYLWSDTLTADAYERFTEGKGAYDKDVAALLRKHVFSVGNTLDPADAYRAFRGREAGIQALMRK RGFPVPAAQAAPKKAAK
Specific function: Removes dipeptides from the C-termini of N-blocked tripeptides, tetrapeptides and larger peptides [H]
COG id: COG0339
COG function: function code E; Zn-dependent oligopeptidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M3 family [H]
Homologues:
Organism=Homo sapiens, GI4507491, Length=682, Percent_Identity=28.1524926686217, Blast_Score=248, Evalue=1e-65, Organism=Homo sapiens, GI14149738, Length=652, Percent_Identity=26.840490797546, Blast_Score=226, Evalue=8e-59, Organism=Homo sapiens, GI156105687, Length=624, Percent_Identity=23.2371794871795, Blast_Score=133, Evalue=6e-31, Organism=Escherichia coli, GI1787819, Length=682, Percent_Identity=38.1231671554252, Blast_Score=457, Evalue=1e-130, Organism=Escherichia coli, GI1789913, Length=691, Percent_Identity=31.6931982633864, Blast_Score=330, Evalue=2e-91, Organism=Caenorhabditis elegans, GI71999758, Length=591, Percent_Identity=22.165820642978, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI32565901, Length=566, Percent_Identity=20.8480565371025, Blast_Score=73, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6319793, Length=610, Percent_Identity=27.0491803278689, Blast_Score=194, Evalue=6e-50, Organism=Saccharomyces cerevisiae, GI6322715, Length=670, Percent_Identity=21.6417910447761, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI21356111, Length=686, Percent_Identity=23.0320699708455, Blast_Score=166, Evalue=6e-41, Organism=Drosophila melanogaster, GI20129717, Length=373, Percent_Identity=26.2734584450402, Blast_Score=117, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001567 [H]
Pfam domain/function: PF01432 Peptidase_M3 [H]
EC number: =3.4.15.5 [H]
Molecular weight: Translated: 81992; Mature: 81992
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLFFAGAGMAVLVSTGCATTSQESQNLATAPQTTAPAAPAAPEQTNPLIAKWTGAHGG CCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC VPPFDQVKVELFKPALEAAMERTRGELAAIANDTSAPTFENTIVALESAGKTQGEVETLY CCCHHHHHHHHHHHHHHHHHHHHCCCEEEHCCCCCCCCCCCEEEEEECCCCCCCHHHHHH GIWSSSMSGPEFQALEREMAPKLAAFDDEIFQNEALFRRIEAVYQSPDKAKLTPEQQRLT HHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH WLHYTRFVRSGAKLDAAAKQKLAAINQRLASLYTSFSQNVLADEEGYTVVLESEADLAGL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC PDSVRAGAAAAAESRGQKGKWLITNTRSSMEPFLTYSSRRDLREKVWRNYVNRGDNGDAR CHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DNNVIIAEVLKLRAERATLLGYKTHAHWRLENAMARTPERAMELMEAVWKPAVARVHEEV CCCCHHHHHHHHHHHHHHHEEEECCCCEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH ADMQRVANKEGAKLKIEPWDYRYYAEKVRKAKYDLDQNEVKPYLQLEKLREGMFWVAGEL HHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCHHHHHHHH FGFSFTQVNDVPVFHPDVRVWEVKDQASGRHVGLWYFDPYARKGKRSGAWMNAYRSQERF HCCEECEECCCCEECCCCEEEEECCCCCCCEEEEEEECHHHHCCCCCCHHHHHHHHHHHH RGEVTTIVSNNSNFVKGQPGEPVLISWEDASTLFHEFGHALHGLSSNVTYPSLAGTAVAR CCCEEEEEECCCCEECCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH DYVEFPSQLLEHWLSTPEVLNTYALHYQTGKPIPQALVDRIEKAATFNQGFGTVEYLSSA HHHHHHHHHHHHHCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH LVDMKLHLAGATPIDADAFERDTLNALGMPKEIVMRHRTPQFGHVFAGDGYSAGYYSYLW HHHHHEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCEEECCCCCCCCHHHHHH SDTLTADAYERFTEGKGAYDKDVAALLRKHVFSVGNTLDPADAYRAFRGREAGIQALMRK HCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHH RGFPVPAAQAAPKKAAK CCCCCCCCCCCCCCCCC >Mature Secondary Structure MRKLFFAGAGMAVLVSTGCATTSQESQNLATAPQTTAPAAPAAPEQTNPLIAKWTGAHGG CCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC VPPFDQVKVELFKPALEAAMERTRGELAAIANDTSAPTFENTIVALESAGKTQGEVETLY CCCHHHHHHHHHHHHHHHHHHHHCCCEEEHCCCCCCCCCCCEEEEEECCCCCCCHHHHHH GIWSSSMSGPEFQALEREMAPKLAAFDDEIFQNEALFRRIEAVYQSPDKAKLTPEQQRLT HHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH WLHYTRFVRSGAKLDAAAKQKLAAINQRLASLYTSFSQNVLADEEGYTVVLESEADLAGL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC PDSVRAGAAAAAESRGQKGKWLITNTRSSMEPFLTYSSRRDLREKVWRNYVNRGDNGDAR CHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DNNVIIAEVLKLRAERATLLGYKTHAHWRLENAMARTPERAMELMEAVWKPAVARVHEEV CCCCHHHHHHHHHHHHHHHEEEECCCCEEHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH ADMQRVANKEGAKLKIEPWDYRYYAEKVRKAKYDLDQNEVKPYLQLEKLREGMFWVAGEL HHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCHHHHHHHH FGFSFTQVNDVPVFHPDVRVWEVKDQASGRHVGLWYFDPYARKGKRSGAWMNAYRSQERF HCCEECEECCCCEECCCCEEEEECCCCCCCEEEEEEECHHHHCCCCCCHHHHHHHHHHHH RGEVTTIVSNNSNFVKGQPGEPVLISWEDASTLFHEFGHALHGLSSNVTYPSLAGTAVAR CCCEEEEEECCCCEECCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH DYVEFPSQLLEHWLSTPEVLNTYALHYQTGKPIPQALVDRIEKAATFNQGFGTVEYLSSA HHHHHHHHHHHHHCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH LVDMKLHLAGATPIDADAFERDTLNALGMPKEIVMRHRTPQFGHVFAGDGYSAGYYSYLW HHHHHEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCEEECCCCCCCCHHHHHH SDTLTADAYERFTEGKGAYDKDVAALLRKHVFSVGNTLDPADAYRAFRGREAGIQALMRK HCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHH RGFPVPAAQAAPKKAAK CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226676; 9097039; 9278503 [H]