| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yfiS [H]
Identifier: 108757695
GI number: 108757695
Start: 6565661
End: 6566905
Strand: Direct
Name: yfiS [H]
Synonym: MXAN_5267
Alternate gene names: 108757695
Gene position: 6565661-6566905 (Clockwise)
Preceding gene: 108758272
Following gene: 108758494
Centisome position: 71.84
GC content: 66.18
Gene sequence:
>1245_bases ATGCACGCTTCCTGGAAGCGCAACACAGCCCTTTTCCTGGGCAGCCAGGCCCTCTCTTTACTCGGCTCCTCCCTGGTGCA GTACGCGCTCCTGTGGCAGGTGACGCTGCAGACACGCTCGAGCGTCATGATGACGCTCTACATCGTGGCCGGCTTCCTGC CCACGTTCATCCTCTCGCCTTTCGCGGGCGTCTGGGCGGACCGGTACGACCGCCGCAAGCTCATCGTCCTCGCCGATGCG ATGATTGCGCTGGTGACCCTGGCGCTGGCCGTGGTGTTCACCTTGCGCGGCACGGAGCTGTGGCTCTTCTTCCTGGCCGC GGCGATCCGCTCCGTGGGGACGGCCGTTCAACAGCCGGCGGTGGGCGCGCTGCTGCCGCAGTTGGTGCCCGAAGACCAGT TGATGCGGGTCAACAGCATCCAGGGCACCCTCCACTCGGTCAACATGTTGGGGGCGCCCGCGCTCGCCGGCTTCCTCATG TCCGTGGCCCCCCTGCAGGTGCTCTTCTACATCGACGTGGTGACAGCGGCCCTGGCCATCGCCCTGGTGACGCTCTTCGT CCAGGTCAAGCCGCGTCCCCGCGCGCCGGAGCAGGAGGGGGCCTCGCAGCTGACGGAGATCCAAGACGGCTTCCGCTACA TCCGCGGCCACGCGCACCTGGTGCCGTTCTTCGGCTACCTGGGATTCATCATGGTCCTCATCACTCCGGCCGCATTCCTC ACGCCGCTGCAGACGGCGCGAAGCTTCGGGGAAGAGGTGTGGAGGTTGACGGCCATCGAAATGGTCTTCTCGGTGGGCAT GATGTTGGGGGGCGCCGCGCTCGCGGCGTGGGGCGGCTTCAGCAGCCGCATGCGGACGATGGTCACATCCAACCTCATCA TGGGTGCGTGCACCGTGGCCCTCGGCGTGGTGCCTCACTTCGGGGTGTACCTGGCGGCCATGGGGATCTTCGGCGTGGCG CTACCGCTCTACAACACGCCCGCCATGGTGATGCTCCAGGAGCGCGTGGAGCCGGCCTACCTGGGCCGAGTCTTCAGCGT GATGACCATGCTCTCCACCGCGCTGATGCCGATGTCCATGCTGTTCTTCGGGCCCCTGGCAGAAGTGGTCTCCATCGAGC GGCTCCTGCAGGTCACCGGCGTGCTGGTGATCCTCCTCGGACTGCTCACGCCGCTACACCGTCGGCTGATGTCCTTCGGT GAGCCCAAGAGCCCCCCAGTTCAATCCCAGGAACTGGCCAGTTGA
Upstream 100 bases:
>100_bases AGCGAACTTCACTCGCAGCCGAAGAGAAGGATACGTCCAGTATGGAGTCATCCAGACCGGTGCGGTTGTTGATACCCGGC CAGCGGTTACAGTGCGCGCC
Downstream 100 bases:
>100_bases AGGTGAGAGGGGCACCACCTCCCACGCCGCACACCGGTCAGTAGCGCGGCGCGGCCTCCATGGGCACCGCGTCCCGCGAA GACGAAGCGGGCGCCCCCTG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MHASWKRNTALFLGSQALSLLGSSLVQYALLWQVTLQTRSSVMMTLYIVAGFLPTFILSPFAGVWADRYDRRKLIVLADA MIALVTLALAVVFTLRGTELWLFFLAAAIRSVGTAVQQPAVGALLPQLVPEDQLMRVNSIQGTLHSVNMLGAPALAGFLM SVAPLQVLFYIDVVTAALAIALVTLFVQVKPRPRAPEQEGASQLTEIQDGFRYIRGHAHLVPFFGYLGFIMVLITPAAFL TPLQTARSFGEEVWRLTAIEMVFSVGMMLGGAALAAWGGFSSRMRTMVTSNLIMGACTVALGVVPHFGVYLAAMGIFGVA LPLYNTPAMVMLQERVEPAYLGRVFSVMTMLSTALMPMSMLFFGPLAEVVSIERLLQVTGVLVILLGLLTPLHRRLMSFG EPKSPPVQSQELAS
Sequences:
>Translated_414_residues MHASWKRNTALFLGSQALSLLGSSLVQYALLWQVTLQTRSSVMMTLYIVAGFLPTFILSPFAGVWADRYDRRKLIVLADA MIALVTLALAVVFTLRGTELWLFFLAAAIRSVGTAVQQPAVGALLPQLVPEDQLMRVNSIQGTLHSVNMLGAPALAGFLM SVAPLQVLFYIDVVTAALAIALVTLFVQVKPRPRAPEQEGASQLTEIQDGFRYIRGHAHLVPFFGYLGFIMVLITPAAFL TPLQTARSFGEEVWRLTAIEMVFSVGMMLGGAALAAWGGFSSRMRTMVTSNLIMGACTVALGVVPHFGVYLAAMGIFGVA LPLYNTPAMVMLQERVEPAYLGRVFSVMTMLSTALMPMSMLFFGPLAEVVSIERLLQVTGVLVILLGLLTPLHRRLMSFG EPKSPPVQSQELAS >Mature_414_residues MHASWKRNTALFLGSQALSLLGSSLVQYALLWQVTLQTRSSVMMTLYIVAGFLPTFILSPFAGVWADRYDRRKLIVLADA MIALVTLALAVVFTLRGTELWLFFLAAAIRSVGTAVQQPAVGALLPQLVPEDQLMRVNSIQGTLHSVNMLGAPALAGFLM SVAPLQVLFYIDVVTAALAIALVTLFVQVKPRPRAPEQEGASQLTEIQDGFRYIRGHAHLVPFFGYLGFIMVLITPAAFL TPLQTARSFGEEVWRLTAIEMVFSVGMMLGGAALAAWGGFSSRMRTMVTSNLIMGACTVALGVVPHFGVYLAAMGIFGVA LPLYNTPAMVMLQERVEPAYLGRVFSVMTMLSTALMPMSMLFFGPLAEVVSIERLLQVTGVLVILLGLLTPLHRRLMSFG EPKSPPVQSQELAS
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 44939; Mature: 44939
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHASWKRNTALFLGSQALSLLGSSLVQYALLWQVTLQTRSSVMMTLYIVAGFLPTFILSP CCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAGVWADRYDRRKLIVLADAMIALVTLALAVVFTLRGTELWLFFLAAAIRSVGTAVQQPA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCH VGALLPQLVPEDQLMRVNSIQGTLHSVNMLGAPALAGFLMSVAPLQVLFYIDVVTAALAI HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVTLFVQVKPRPRAPEQEGASQLTEIQDGFRYIRGHAHLVPFFGYLGFIMVLITPAAFL HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH TPLQTARSFGEEVWRLTAIEMVFSVGMMLGGAALAAWGGFSSRMRTMVTSNLIMGACTVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LGVVPHFGVYLAAMGIFGVALPLYNTPAMVMLQERVEPAYLGRVFSVMTMLSTALMPMSM HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LFFGPLAEVVSIERLLQVTGVLVILLGLLTPLHRRLMSFGEPKSPPVQSQELAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCC >Mature Secondary Structure MHASWKRNTALFLGSQALSLLGSSLVQYALLWQVTLQTRSSVMMTLYIVAGFLPTFILSP CCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAGVWADRYDRRKLIVLADAMIALVTLALAVVFTLRGTELWLFFLAAAIRSVGTAVQQPA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCH VGALLPQLVPEDQLMRVNSIQGTLHSVNMLGAPALAGFLMSVAPLQVLFYIDVVTAALAI HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVTLFVQVKPRPRAPEQEGASQLTEIQDGFRYIRGHAHLVPFFGYLGFIMVLITPAAFL HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH TPLQTARSFGEEVWRLTAIEMVFSVGMMLGGAALAAWGGFSSRMRTMVTSNLIMGACTVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LGVVPHFGVYLAAMGIFGVALPLYNTPAMVMLQERVEPAYLGRVFSVMTMLSTALMPMSM HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LFFGPLAEVVSIERLLQVTGVLVILLGLLTPLHRRLMSFGEPKSPPVQSQELAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8946165; 9384377 [H]