Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is yfiS [H]

Identifier: 108757695

GI number: 108757695

Start: 6565661

End: 6566905

Strand: Direct

Name: yfiS [H]

Synonym: MXAN_5267

Alternate gene names: 108757695

Gene position: 6565661-6566905 (Clockwise)

Preceding gene: 108758272

Following gene: 108758494

Centisome position: 71.84

GC content: 66.18

Gene sequence:

>1245_bases
ATGCACGCTTCCTGGAAGCGCAACACAGCCCTTTTCCTGGGCAGCCAGGCCCTCTCTTTACTCGGCTCCTCCCTGGTGCA
GTACGCGCTCCTGTGGCAGGTGACGCTGCAGACACGCTCGAGCGTCATGATGACGCTCTACATCGTGGCCGGCTTCCTGC
CCACGTTCATCCTCTCGCCTTTCGCGGGCGTCTGGGCGGACCGGTACGACCGCCGCAAGCTCATCGTCCTCGCCGATGCG
ATGATTGCGCTGGTGACCCTGGCGCTGGCCGTGGTGTTCACCTTGCGCGGCACGGAGCTGTGGCTCTTCTTCCTGGCCGC
GGCGATCCGCTCCGTGGGGACGGCCGTTCAACAGCCGGCGGTGGGCGCGCTGCTGCCGCAGTTGGTGCCCGAAGACCAGT
TGATGCGGGTCAACAGCATCCAGGGCACCCTCCACTCGGTCAACATGTTGGGGGCGCCCGCGCTCGCCGGCTTCCTCATG
TCCGTGGCCCCCCTGCAGGTGCTCTTCTACATCGACGTGGTGACAGCGGCCCTGGCCATCGCCCTGGTGACGCTCTTCGT
CCAGGTCAAGCCGCGTCCCCGCGCGCCGGAGCAGGAGGGGGCCTCGCAGCTGACGGAGATCCAAGACGGCTTCCGCTACA
TCCGCGGCCACGCGCACCTGGTGCCGTTCTTCGGCTACCTGGGATTCATCATGGTCCTCATCACTCCGGCCGCATTCCTC
ACGCCGCTGCAGACGGCGCGAAGCTTCGGGGAAGAGGTGTGGAGGTTGACGGCCATCGAAATGGTCTTCTCGGTGGGCAT
GATGTTGGGGGGCGCCGCGCTCGCGGCGTGGGGCGGCTTCAGCAGCCGCATGCGGACGATGGTCACATCCAACCTCATCA
TGGGTGCGTGCACCGTGGCCCTCGGCGTGGTGCCTCACTTCGGGGTGTACCTGGCGGCCATGGGGATCTTCGGCGTGGCG
CTACCGCTCTACAACACGCCCGCCATGGTGATGCTCCAGGAGCGCGTGGAGCCGGCCTACCTGGGCCGAGTCTTCAGCGT
GATGACCATGCTCTCCACCGCGCTGATGCCGATGTCCATGCTGTTCTTCGGGCCCCTGGCAGAAGTGGTCTCCATCGAGC
GGCTCCTGCAGGTCACCGGCGTGCTGGTGATCCTCCTCGGACTGCTCACGCCGCTACACCGTCGGCTGATGTCCTTCGGT
GAGCCCAAGAGCCCCCCAGTTCAATCCCAGGAACTGGCCAGTTGA

Upstream 100 bases:

>100_bases
AGCGAACTTCACTCGCAGCCGAAGAGAAGGATACGTCCAGTATGGAGTCATCCAGACCGGTGCGGTTGTTGATACCCGGC
CAGCGGTTACAGTGCGCGCC

Downstream 100 bases:

>100_bases
AGGTGAGAGGGGCACCACCTCCCACGCCGCACACCGGTCAGTAGCGCGGCGCGGCCTCCATGGGCACCGCGTCCCGCGAA
GACGAAGCGGGCGCCCCCTG

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MHASWKRNTALFLGSQALSLLGSSLVQYALLWQVTLQTRSSVMMTLYIVAGFLPTFILSPFAGVWADRYDRRKLIVLADA
MIALVTLALAVVFTLRGTELWLFFLAAAIRSVGTAVQQPAVGALLPQLVPEDQLMRVNSIQGTLHSVNMLGAPALAGFLM
SVAPLQVLFYIDVVTAALAIALVTLFVQVKPRPRAPEQEGASQLTEIQDGFRYIRGHAHLVPFFGYLGFIMVLITPAAFL
TPLQTARSFGEEVWRLTAIEMVFSVGMMLGGAALAAWGGFSSRMRTMVTSNLIMGACTVALGVVPHFGVYLAAMGIFGVA
LPLYNTPAMVMLQERVEPAYLGRVFSVMTMLSTALMPMSMLFFGPLAEVVSIERLLQVTGVLVILLGLLTPLHRRLMSFG
EPKSPPVQSQELAS

Sequences:

>Translated_414_residues
MHASWKRNTALFLGSQALSLLGSSLVQYALLWQVTLQTRSSVMMTLYIVAGFLPTFILSPFAGVWADRYDRRKLIVLADA
MIALVTLALAVVFTLRGTELWLFFLAAAIRSVGTAVQQPAVGALLPQLVPEDQLMRVNSIQGTLHSVNMLGAPALAGFLM
SVAPLQVLFYIDVVTAALAIALVTLFVQVKPRPRAPEQEGASQLTEIQDGFRYIRGHAHLVPFFGYLGFIMVLITPAAFL
TPLQTARSFGEEVWRLTAIEMVFSVGMMLGGAALAAWGGFSSRMRTMVTSNLIMGACTVALGVVPHFGVYLAAMGIFGVA
LPLYNTPAMVMLQERVEPAYLGRVFSVMTMLSTALMPMSMLFFGPLAEVVSIERLLQVTGVLVILLGLLTPLHRRLMSFG
EPKSPPVQSQELAS
>Mature_414_residues
MHASWKRNTALFLGSQALSLLGSSLVQYALLWQVTLQTRSSVMMTLYIVAGFLPTFILSPFAGVWADRYDRRKLIVLADA
MIALVTLALAVVFTLRGTELWLFFLAAAIRSVGTAVQQPAVGALLPQLVPEDQLMRVNSIQGTLHSVNMLGAPALAGFLM
SVAPLQVLFYIDVVTAALAIALVTLFVQVKPRPRAPEQEGASQLTEIQDGFRYIRGHAHLVPFFGYLGFIMVLITPAAFL
TPLQTARSFGEEVWRLTAIEMVFSVGMMLGGAALAAWGGFSSRMRTMVTSNLIMGACTVALGVVPHFGVYLAAMGIFGVA
LPLYNTPAMVMLQERVEPAYLGRVFSVMTMLSTALMPMSMLFFGPLAEVVSIERLLQVTGVLVILLGLLTPLHRRLMSFG
EPKSPPVQSQELAS

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44939; Mature: 44939

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]