Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is rimJ [H]

Identifier: 108758462

GI number: 108758462

Start: 389155

End: 389745

Strand: Reverse

Name: rimJ [H]

Synonym: MXAN_0332

Alternate gene names: 108758462

Gene position: 389745-389155 (Counterclockwise)

Preceding gene: 108756980

Following gene: 108760760

Centisome position: 4.26

GC content: 67.68

Gene sequence:

>591_bases
ATGCCCGCCATGGGCCCAGACGCAGTTTTCAACCTGCTGAGCACCGAACGCCTGCATCTGGTGCAGCTCCCACCGGATGC
GGCGTGGCGGGTGCTCGCGTACCACGAGGCGAACCGGGAGCACGTCTCCACCGTGTCACCGGCACGGCCGGCCAACTTCT
TCTCGGTGACGTACTGGCGCACGCGGCTGGCGCAGGACCGCGAGGACTTCCGGCTCGACCTGTCGCTGCGCGTGTTCCTG
CTGCCGCGAAAACAGTCCATCCAGTTGTCGCCCATCATCGGCAACATCTCACTCACGAACATCCGCCGCGGTCCGTTGCA
GTCCGCGGACCTGGGCTACGGCTTGGACCACCGCTACGAAGGCCAGGGCCTGATGACGGAGGCCCTGCGCGCGCTGTGTG
ACTACGCCTTCAACGTCATGGGCCTGCACCGGCTCCAGGCCAACCACCTGCCGGAGAACCTGCGCAGCGCCGCGGTGCTG
AAGCGCCTGGGCTTCCAGGTGGAGGGCATCGCGCGGGAGCTCCTGCTCATCGACGGCCAGTGGCGCGACCACGTCCTCAA
CGCGCTGATTGCCCCTGGCCGGCGAGGATGA

Upstream 100 bases:

>100_bases
AAATCATCCTCCCGCGTGGAGGGGAGGAGGCCACTGGCGGCAGCGGCGCTGAGCCCCCGACGACGCCTCGGCGCTGAAAT
CCAACGGACGCCGGAGTTGA

Downstream 100 bases:

>100_bases
CCCGGAGCTACCCGCCGCGCTTCGTCATGTCGAAGAGCGCCCGGGCCTGGGGGCCCAGGAAGCCGTCGAAGTCCGGCGTG
CGCTGGGCAATCTCGAAGTA

Product: ribosomal protein alanine acetyltransferase

Products: NA

Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S5 [H]

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MPAMGPDAVFNLLSTERLHLVQLPPDAAWRVLAYHEANREHVSTVSPARPANFFSVTYWRTRLAQDREDFRLDLSLRVFL
LPRKQSIQLSPIIGNISLTNIRRGPLQSADLGYGLDHRYEGQGLMTEALRALCDYAFNVMGLHRLQANHLPENLRSAAVL
KRLGFQVEGIARELLLIDGQWRDHVLNALIAPGRRG

Sequences:

>Translated_196_residues
MPAMGPDAVFNLLSTERLHLVQLPPDAAWRVLAYHEANREHVSTVSPARPANFFSVTYWRTRLAQDREDFRLDLSLRVFL
LPRKQSIQLSPIIGNISLTNIRRGPLQSADLGYGLDHRYEGQGLMTEALRALCDYAFNVMGLHRLQANHLPENLRSAAVL
KRLGFQVEGIARELLLIDGQWRDHVLNALIAPGRRG
>Mature_195_residues
PAMGPDAVFNLLSTERLHLVQLPPDAAWRVLAYHEANREHVSTVSPARPANFFSVTYWRTRLAQDREDFRLDLSLRVFLL
PRKQSIQLSPIIGNISLTNIRRGPLQSADLGYGLDHRYEGQGLMTEALRALCDYAFNVMGLHRLQANHLPENLRSAAVLK
RLGFQVEGIARELLLIDGQWRDHVLNALIAPGRRG

Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S5. Plays also a role in the temperature regulation of pap pilin transcription [H]

COG id: COG1670

COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI1787305, Length=181, Percent_Identity=38.121546961326, Blast_Score=120, Evalue=8e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: =2.3.1.128 [H]

Molecular weight: Translated: 22182; Mature: 22051

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAMGPDAVFNLLSTERLHLVQLPPDAAWRVLAYHEANREHVSTVSPARPANFFSVTYWR
CCCCCHHHHHHHHCCCCEEEEECCCCHHEEEEEEECCCCHHHCCCCCCCCCCEEEHHHHH
TRLAQDREDFRLDLSLRVFLLPRKQSIQLSPIIGNISLTNIRRGPLQSADLGYGLDHRYE
HHHHCCCCCEEEEEEEEEEEECCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCC
GQGLMTEALRALCDYAFNVMGLHRLQANHLPENLRSAAVLKRLGFQVEGIARELLLIDGQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHEEEEEECCC
WRDHVLNALIAPGRRG
HHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PAMGPDAVFNLLSTERLHLVQLPPDAAWRVLAYHEANREHVSTVSPARPANFFSVTYWR
CCCCHHHHHHHHCCCCEEEEECCCCHHEEEEEEECCCCHHHCCCCCCCCCCEEEHHHHH
TRLAQDREDFRLDLSLRVFLLPRKQSIQLSPIIGNISLTNIRRGPLQSADLGYGLDHRYE
HHHHCCCCCEEEEEEEEEEEECCCCCEEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCC
GQGLMTEALRALCDYAFNVMGLHRLQANHLPENLRSAAVLKRLGFQVEGIARELLLIDGQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHEEEEEECCC
WRDHVLNALIAPGRRG
HHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]