Click here to switch to the map view.

The map label for this gene is 108758068

Identifier: 108758068

GI number: 108758068

Start: 6470770

End: 6471498

Strand: Direct

Name: 108758068

Synonym: MXAN_5179

Alternate gene names: NA

Gene position: 6470770-6471498 (Clockwise)

Preceding gene: 108760762

Following gene: 108762542

Centisome position: 70.8

GC content: 71.74

Gene sequence:

>729_bases
GTGGACCACTTGAGCCGGGCCCACCTGTTGCGCGACTGGGACGACCTCGCTGGCGCGCTCACCGAGTGTCGCCGTGCGAT
TCATGACGCCCCCGACGACGTGGCCGCCTTGGCGCTGGCGGCGGAGCTCGCCGGGCTCACGGGCCGGACGGACCTGGCCG
TGCGTGCCCATGCCCAGCTCGGCCGCCTGCTTCCCCTGGATGCCCGCCCCTTGGTGCGTCAGGCAAGGCTGCTGGTGTCC
CTGGGCCGCCATGCCGAAGCGGTGTCCGTGGGCGAAGAGGCCGTGCTGCGCAATCCCGAGTACGTGGAGGCCTATCAGGT
GCTCGGGCGCGCGCACCTTGTGCAGGGTGAGCTGGCGAAAGCGATGCTGCGCTTCGAGCAGGCCGTCCACCTCCACCCCG
AGCACGGCTACGCCCTCAACAACCTGGGCCTCACCTACCTGCGTGCCGGAGAAGCCCAGAAGGCCGCGGACGTGCTCGTC
CGGGCGGCGGAGCTGCTCCCTCACGTGGCTTATGTGCACAACAACCTGGGCGTGGCCTACGAGCGGCTCGGACAGGTGGA
GGAGGCCCGGGCGGCCTATGCCGCCGCCATGCACCTGTCACCGCGCTACGTCCAGGCCCGCGTCAACGCGGACCGGATGC
GCCGCACGGCCCACGCGGACATGGCCGGCGCCCGGACGGCTCGTGAGCAGCTGCTCCCCTCCCAGGGAGAGGCGCCTGCT
TCCCGGTAG

Upstream 100 bases:

>100_bases
CGGCATCGCGCACGTCGGAGCCGCGTCCGAAGCCGCATCGGAAGGTTCGAACATCGCGCCGGACGCCGAGCTCGCGTTGC
CACACAGGCATGGACGGCGC

Downstream 100 bases:

>100_bases
CGCCTTCCTGCCTGGAGGCCCTGCGCCGGGCGAGCCTCCAGAGCGGTTCCCGTTCGGTGTCCCCCGGTCTAACCTGCGGA
CTTTCTTTCCAGCGCAATGA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Peptidase; Sulfotransferase; Porphyrin Biosynthesis Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat Domain Protein; Social Gliding Motility Protein Tgl; Tetratricopeptide Repeat Protein

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MDHLSRAHLLRDWDDLAGALTECRRAIHDAPDDVAALALAAELAGLTGRTDLAVRAHAQLGRLLPLDARPLVRQARLLVS
LGRHAEAVSVGEEAVLRNPEYVEAYQVLGRAHLVQGELAKAMLRFEQAVHLHPEHGYALNNLGLTYLRAGEAQKAADVLV
RAAELLPHVAYVHNNLGVAYERLGQVEEARAAYAAAMHLSPRYVQARVNADRMRRTAHADMAGARTAREQLLPSQGEAPA
SR

Sequences:

>Translated_242_residues
MDHLSRAHLLRDWDDLAGALTECRRAIHDAPDDVAALALAAELAGLTGRTDLAVRAHAQLGRLLPLDARPLVRQARLLVS
LGRHAEAVSVGEEAVLRNPEYVEAYQVLGRAHLVQGELAKAMLRFEQAVHLHPEHGYALNNLGLTYLRAGEAQKAADVLV
RAAELLPHVAYVHNNLGVAYERLGQVEEARAAYAAAMHLSPRYVQARVNADRMRRTAHADMAGARTAREQLLPSQGEAPA
SR
>Mature_242_residues
MDHLSRAHLLRDWDDLAGALTECRRAIHDAPDDVAALALAAELAGLTGRTDLAVRAHAQLGRLLPLDARPLVRQARLLVS
LGRHAEAVSVGEEAVLRNPEYVEAYQVLGRAHLVQGELAKAMLRFEQAVHLHPEHGYALNNLGLTYLRAGEAQKAADVLV
RAAELLPHVAYVHNNLGVAYERLGQVEEARAAYAAAMHLSPRYVQARVNADRMRRTAHADMAGARTAREQLLPSQGEAPA
SR

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307148, Length=148, Percent_Identity=29.7297297297297, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI32307150, Length=148, Percent_Identity=29.7297297297297, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26399; Mature: 26399

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHLSRAHLLRDWDDLAGALTECRRAIHDAPDDVAALALAAELAGLTGRTDLAVRAHAQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
GRLLPLDARPLVRQARLLVSLGRHAEAVSVGEEAVLRNPEYVEAYQVLGRAHLVQGELAK
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
AMLRFEQAVHLHPEHGYALNNLGLTYLRAGEAQKAADVLVRAAELLPHVAYVHNNLGVAY
HHHHHHHHHHCCCCCCCCHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
ERLGQVEEARAAYAAAMHLSPRYVQARVNADRMRRTAHADMAGARTAREQLLPSQGEAPA
HHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SR
CC
>Mature Secondary Structure
MDHLSRAHLLRDWDDLAGALTECRRAIHDAPDDVAALALAAELAGLTGRTDLAVRAHAQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
GRLLPLDARPLVRQARLLVSLGRHAEAVSVGEEAVLRNPEYVEAYQVLGRAHLVQGELAK
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
AMLRFEQAVHLHPEHGYALNNLGLTYLRAGEAQKAADVLVRAAELLPHVAYVHNNLGVAY
HHHHHHHHHHCCCCCCCCHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
ERLGQVEEARAAYAAAMHLSPRYVQARVNADRMRRTAHADMAGARTAREQLLPSQGEAPA
HHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
SR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA