| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is hisA
Identifier: 108758023
GI number: 108758023
Start: 5185332
End: 5186048
Strand: Reverse
Name: hisA
Synonym: MXAN_4226
Alternate gene names: 108758023
Gene position: 5186048-5185332 (Counterclockwise)
Preceding gene: 108762544
Following gene: 108758246
Centisome position: 56.74
GC content: 69.87
Gene sequence:
>717_bases GTGATTGCGATTCCAGCCATCGATCTGCGCGAGGGCGCGTGTGTCCAACTCGTGGGCGGCTCGTACGCGGCGGAGAAGGT CCGGGTGGAGGAACCGCTGGAGGCATTGAAGCAGTGGCGCCGTCACGGCTTCCGCGCGTTCCATGTCGTGGACCTGGACG CGGCGCTGGGCAAGGGCTCCAACGCGGACGCCATCTTCCAACTGACCGCCTACGAGCGAGGGCTCACCTTCTCCGTGGGC GGCGGCGTGCGCGATTCCGACCGGGTGGAGACCGTCCTGTCAGGCGGAGCCGAGTTCGTGGTGGTGGGAACTCGCGCCAT CGAAGACGCCGGCTGGCTGGCGGACATCGCCAACCGCTTCCCCGGCCGGGTGGTGGTGGCCGCGGACGTGAAGGGGCGAG AGGTGGTGACGCGAGGCTGGACGGCGGGAAGCCATCGGGACATCCGGGAGGTGCTGGCGGCCTTCGAGCCCTTGCCGCTG GGGGGCCTGCTCGTGACGGCGGTCCACAAGGAGGGCCAGTTGTCGGGAGTGGACCTGCCGTTGATGCGGGAGGTGGCGAG CACCAGCCGGCACCGTCTGTACGCGTCGGGTGGCGTGACGACGATGGAGGACCTGCGGGCCCTCGCGGCGGCGGGCGCAT ACGGGGCCGTCATTGGCATGGCGCTGTACACCGGAAGGCTGGATGCGAGCGCAGTCGCTCGGGAGTTCGCGGGATGA
Upstream 100 bases:
>100_bases CGGTGCGCAGGGGAAGGGTGGTGGGTGTGCAGTTCCACCCGGAGAAGTCCTCCACGGCGGGCGTGCGCTTCGTGCAGGCC TTCCTGCGGGAGGTGGCGCC
Downstream 100 bases:
>100_bases CCACTGTCATTCGGGAGACGAAGGAGACGCAGGTCCGGGTGGAGCTGGCGCCGGGCAAGGGCGTCACGAACGTGGACACG GGGTTGAAGTTCTTCGACCA
Product: putative phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MIAIPAIDLREGACVQLVGGSYAAEKVRVEEPLEALKQWRRHGFRAFHVVDLDAALGKGSNADAIFQLTAYERGLTFSVG GGVRDSDRVETVLSGGAEFVVVGTRAIEDAGWLADIANRFPGRVVVAADVKGREVVTRGWTAGSHRDIREVLAAFEPLPL GGLLVTAVHKEGQLSGVDLPLMREVASTSRHRLYASGGVTTMEDLRALAAAGAYGAVIGMALYTGRLDASAVAREFAG
Sequences:
>Translated_238_residues MIAIPAIDLREGACVQLVGGSYAAEKVRVEEPLEALKQWRRHGFRAFHVVDLDAALGKGSNADAIFQLTAYERGLTFSVG GGVRDSDRVETVLSGGAEFVVVGTRAIEDAGWLADIANRFPGRVVVAADVKGREVVTRGWTAGSHRDIREVLAAFEPLPL GGLLVTAVHKEGQLSGVDLPLMREVASTSRHRLYASGGVTTMEDLRALAAAGAYGAVIGMALYTGRLDASAVAREFAG >Mature_238_residues MIAIPAIDLREGACVQLVGGSYAAEKVRVEEPLEALKQWRRHGFRAFHVVDLDAALGKGSNADAIFQLTAYERGLTFSVG GGVRDSDRVETVLSGGAEFVVVGTRAIEDAGWLADIANRFPGRVVVAADVKGREVVTRGWTAGSHRDIREVLAAFEPLPL GGLLVTAVHKEGQLSGVDLPLMREVASTSRHRLYASGGVTTMEDLRALAAAGAYGAVIGMALYTGRLDASAVAREFAG
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=233, Percent_Identity=28.3261802575107, Blast_Score=96, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_MYXXD (Q1D4M2)
Other databases:
- EMBL: CP000113 - RefSeq: YP_632401.1 - ProteinModelPortal: Q1D4M2 - SMR: Q1D4M2 - STRING: Q1D4M2 - GeneID: 4105180 - GenomeReviews: CP000113_GR - KEGG: mxa:MXAN_4226 - TIGR: MXAN_4226 - eggNOG: COG0106 - HOGENOM: HBG541613 - OMA: CARYVVT - ProtClustDB: CLSK2468161 - BioCyc: MXAN246197:MXAN_4226-MONOMER - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 25158; Mature: 25158
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: ACT_SITE 8-8 ACT_SITE 129-129
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAIPAIDLREGACVQLVGGSYAAEKVRVEEPLEALKQWRRHGFRAFHVVDLDAALGKGS CEECCCEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHCCCC NADAIFQLTAYERGLTFSVGGGVRDSDRVETVLSGGAEFVVVGTRAIEDAGWLADIANRF CCCEEEEEEECCCCCEEEECCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHC PGRVVVAADVKGREVVTRGWTAGSHRDIREVLAAFEPLPLGGLLVTAVHKEGQLSGVDLP CCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHH LMREVASTSRHRLYASGGVTTMEDLRALAAAGAYGAVIGMALYTGRLDASAVAREFAG HHHHHHHHHHCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCC >Mature Secondary Structure MIAIPAIDLREGACVQLVGGSYAAEKVRVEEPLEALKQWRRHGFRAFHVVDLDAALGKGS CEECCCEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHCCCC NADAIFQLTAYERGLTFSVGGGVRDSDRVETVLSGGAEFVVVGTRAIEDAGWLADIANRF CCCEEEEEEECCCCCEEEECCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHC PGRVVVAADVKGREVVTRGWTAGSHRDIREVLAAFEPLPLGGLLVTAVHKEGQLSGVDLP CCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHH LMREVASTSRHRLYASGGVTTMEDLRALAAAGAYGAVIGMALYTGRLDASAVAREFAG HHHHHHHHHHCEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA